NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) - gitlab-rnafusion-build2769967-baseline-run-62782965 - Workflow Tracker

Runs
gitlab-rnafu..un-62782965
Tasks
GATK4_MARKDUPLICATES (rna_s1221_S42)

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Task Info

Status: succeeded
Hash: c367ae870873
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: rna_s1221_S42
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: ad/f38896
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/f38896e7b74ab658098eaf1b6f3387
Native ID: nf-adf38896e7b74ab658098eaf1b6f3387-e6003

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 2
Memory (peak / alloc): 42.3 GB / 74.0 GB
Process I/O (rchar / wchar): 1.9 GB / 1.0 GB
Disk I/O (read / write): - / 1.0 GB
Host: i-09158e9fd82f51c8d ( spot)

Runtime

Submitted: May 29, 2026 11:32:33 AM
Completed: May 29, 2026 11:35:13 AM
Total Duration: 2m 39s

Phases

Queue: 19s
Execution: 1m 57s
Stage/Unstage: 23s