Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 1m 38s 2s 1m 25s 11s 1.4 GB 302% 1.6 GB 19.4 MB 1.5 GB 19.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1200_S21) 1m 6s 7s 55s 4s 492.4 MB 198% 1.3 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 25s 2s 2m 50s 1m 33s 35.6 GB 1130% 45.3 GB 9.0 GB 2.8 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1200_S21) 15s 5s 1s 8s 3.8 MB 26% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1200_S21) 8s 5s 1s 2s 225.1 MB 205% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1200_S21) 34s 2s 27s 5s 3.0 GB 876% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 15s 1s 1m 8s 6s 550.0 MB 197% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21) 5s 3s 0s 1s 12.5 MB 805% 4.6 MB 3.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1200_S21) 50s 10s 36s 4s 128.1 MB 123% 919.7 MB 52.5 MB 132.0 KB 52.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1200_S21) 1m 32s 11s 1m 16s 5s 1.1 GB 108% 1.1 GB 1.7 KB 149.7 MB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 12s 2s 5s 5s 24.0 MB 165% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 24s 2s 1m 18s 4s 206.6 MB 102% 853.7 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1200_S21) 18s 11s 1s 6s 74.2 MB 469% 55.7 MB 812 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1200_S21) 19s 18s 0s 0s 0 bytes 229% 63.9 KB 932 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1200_S21) 1m 37s 20s 1m 9s 8s 48.6 MB 97% 872.9 MB 1.3 KB 245.6 MB 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21) 1m 2s 2s 32s 28s 794.1 MB 215% 9.6 GB 261.4 MB 9.6 GB 261.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1200_S21) 3m 40s 28s 1m 44s 1m 27s 2.9 GB 304% 4.9 GB 446.4 MB 561.3 MB 446.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 1m 50s 14s 1m 32s 4s 3.5 GB 116% 878.9 MB 149.0 KB 0 bytes 164.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1200_S21) 1m 37s 25s 52s 20s 4.4 GB 101% 5.1 GB 43.4 MB 0 bytes 43.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1200_S21) 48s 10s 33s 5s 933.7 MB 124% 176.9 MB 69.3 MB 109.9 MB 69.4 MB 1
37 items found |
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