succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 1m 26s 10s 11s 1m 4s 569.5 MB 268% 257.7 MB 28.0 MB 194.7 MB 28.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 16s 2s 7s 7s 24.6 MB 145% 853.8 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 18s 3s 8s 7s 24.1 MB 148% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 5m 30s 37s 3m 43s 1m 10s 35.5 GB 1050% 45.3 GB 9.0 GB 3.0 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 5m 12s 2s 3m 46s 1m 24s 35.5 GB 1007% 46.3 GB 10.1 GB 8.6 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 2m 25s 55s 1m 18s 12s 540.7 MB 201% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 17s 8s 1m 3s 6s 490.3 MB 198% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 5s 2s 1s 2s 71.1 MB 100% 14.8 MB 1.7 MB 0 bytes 1.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 16s 13s 2s 1s 70.8 MB 100% 17.6 MB 2.3 MB 12.0 KB 2.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 1m 37s 2s 1m 28s 7s 2.3 GB 112% 1.4 GB 6.0 MB 0 bytes 6.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 1m 52s 1s 1m 43s 8s 2.3 GB 111% 1.5 GB 9.4 MB 27.7 MB 9.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 12m 2s 24s 10m 19s 1m 18s 35.8 GB 248% 40.4 GB 3.6 GB 1.5 GB 82.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 10m 3s 23s 8m 20s 1m 19s 35.9 GB 223% 40.4 GB 3.7 GB 1.5 GB 89.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 4s 1s 1s 2s 15.1 MB 1690% 33.0 MB 27.9 KB 0 bytes 36.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 9s 5s 1s 3s 15.4 MB 1596% 33.4 MB 40.3 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 14s 9s 1s 3s 125.2 MB 769% 59.8 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 15s 9s 2s 3s 128.2 MB 626% 66.1 MB 20.2 MB 0 bytes 20.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 37s 10s 17s 10s 3.1 GB 101% 1.3 GB 27.7 MB 4.0 KB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 2m 39s 3s 2m 30s 6s 2.6 GB 177% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 1m 53s 2s 1m 41s 10s 1.4 GB 284% 1.6 GB 19.4 MB 1.5 GB 19.4 MB 1
95 items found |
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