succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 2m 14s 39s 11s 1m 23s 560.2 MB 274% 257.7 MB 28.0 MB 196.1 MB 28.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 11s 1s 5s 5s 23.5 MB 163% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 13s 2s 6s 5s 25.0 MB 162% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 14s 22s 2m 49s 1m 3s 35.6 GB 1133% 45.3 GB 9.0 GB 2.8 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 3s 2s 2m 55s 1m 6s 35.6 GB 1102% 46.3 GB 10.1 GB 2.8 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 39s 18s 1m 16s 5s 517.4 MB 200% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 13s 2s 1m 4s 7s 493.6 MB 197% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 12s 9s 2s 1s 62.4 MB 106% 14.8 MB 1.7 MB 0 bytes 1.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 16s 12s 2s 2s 65.2 MB 101% 17.6 MB 2.3 MB 0 bytes 2.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 2m 7s 2s 2m 0s 5s 2.3 GB 103% 1.4 GB 6.0 MB 0 bytes 6.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 1m 31s 1s 1m 26s 4s 2.3 GB 94% 1.5 GB 9.4 MB 0 bytes 9.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 10m 58s 51s 8m 44s 1m 22s 35.8 GB 219% 40.4 GB 3.6 GB 1.6 GB 80.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 10m 26s 40s 8m 16s 1m 29s 35.9 GB 221% 40.4 GB 3.7 GB 1.6 GB 89.1 MB 1
failed NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 3s 2s 1s 0s - - - - - - 1
failed NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 6s 4s 2s 0s - - - - - - 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 13s 8s 1s 3s 127.8 MB 115% 59.8 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 6s 1s 2s 2s 128.0 MB 92% 66.1 MB 20.2 MB 0 bytes 20.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 49s 15s 27s 7s 3.1 GB 101% 1.3 GB 27.7 MB 4.0 KB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 4m 1s 29s 3m 28s 4s 2.8 GB 176% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 25s 3s 2m 16s 6s 1.4 GB 262% 1.6 GB 19.3 MB 1.5 GB 19.4 MB 1
95 items found |
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