NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bNS-T1-TRNA-1_B23MHV2LT4_1) - gitlab-rnafusion-build2782924-edge-cases-rund-63104205 - Workflow Tracker

Runs
gitlab-rnafu..nd-63104205
Tasks
GATK4_MARKDUPLICATES (659_bNS-T1-TRNA-1_B23MHV2LT4_1)

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Task Info

Status: succeeded
Hash: 777583f2c3ea
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bNS-T1-TRNA-1_B23MHV2LT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: 37/2220b6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/37/2220b612858d649040da7a89bdb2ef
Native ID: nf-372220b612858d649040da7a89bdb2ef-a3940

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 60.6 GB / 74.0 GB
Process I/O (rchar / wchar): 63.8 GB / 44.3 GB
Disk I/O (read / write): 35.5 GB / 44.3 GB
Host: i-03b8f951c727f7a43 ( spot)

Runtime

Submitted: Jun 02, 2026 2:47:30 PM
Completed: Jun 02, 2026 3:34:17 PM
Total Duration: 46m 46s

Phases

Queue: 1s
Execution: 44m 37s
Stage/Unstage: 2m 8s