NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bjQ-T1-TRNA-1_B23MHV2LT4_1) - gitlab-rnafusion-build2782924-edge-cases-rund-63104205 - Workflow Tracker

Runs
gitlab-rnafu..nd-63104205
Tasks
GATK4_MARKDUPLICATES (659_bjQ-T1-TRNA-1_B23MHV2LT4_1)

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Task Info

Status: succeeded
Hash: abb6820d880b
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bjQ-T1-TRNA-1_B23MHV2LT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: a1/4c7e25
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/4c7e25bb18b7dd00f5b5a584d9c531
Native ID: nf-a14c7e25bb18b7dd00f5b5a584d9c531-6fca3

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 60.3 GB / 74.0 GB
Process I/O (rchar / wchar): 64.7 GB / 44.8 GB
Disk I/O (read / write): 22.6 GB / 44.8 GB
Host: i-05077a7a13502afc4 ( spot)

Runtime

Submitted: Jun 02, 2026 2:49:30 PM
Completed: Jun 02, 2026 3:34:09 PM
Total Duration: 44m 38s

Phases

Queue: 1s
Execution: 42m 23s
Stage/Unstage: 2m 14s