NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bQZ-T1-TRNA-1_B23MHV2LT4_1) - gitlab-rnafusion-build2782924-edge-cases-rund-63104205 - Workflow Tracker

Runs
gitlab-rnafu..nd-63104205
Tasks
GATK4_MARKDUPLICATES (659_bQZ-T1-TRNA-1_B23MHV2LT4_1)

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Task Info

Status: succeeded
Hash: d8b976c8105f
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bQZ-T1-TRNA-1_B23MHV2LT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: c4/8b5282
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c4/8b5282442e138ce37856f0a030ee45
Native ID: nf-c48b5282442e138ce37856f0a030ee45-a32c6

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 61.1 GB / 74.0 GB
Process I/O (rchar / wchar): 64.5 GB / 45.0 GB
Disk I/O (read / write): 23.4 GB / 45.0 GB
Host: i-0046d0cf7e093de3a ( spot)

Runtime

Submitted: Jun 02, 2026 2:54:29 PM
Completed: Jun 02, 2026 3:38:20 PM
Total Duration: 43m 50s

Phases

Queue: 1s
Execution: 41m 37s
Stage/Unstage: 2m 12s