NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bGW-T1-TRNA-1_B23MHV2LT4_1) - gitlab-rnafusion-build2782974-edge-cases-rund-63106737 - Workflow Tracker

Runs
gitlab-rnafu..nd-63106737
Tasks
GATK4_MARKDUPLICATES (659_bGW-T1-TRNA-1_B23MHV2LT4_1)

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Task Info

Status: succeeded
Hash: b828244caebb
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bGW-T1-TRNA-1_B23MHV2LT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: 7c/b8010f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/b8010f008f41cc83385cacd31ef417
Native ID: nf-7cb8010f008f41cc83385cacd31ef417-00461

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 61.4 GB / 74.0 GB
Process I/O (rchar / wchar): 63.7 GB / 44.2 GB
Disk I/O (read / write): 24.2 GB / 44.2 GB
Host: i-0c310d79363672c83 ( spot)

Runtime

Submitted: Jun 02, 2026 3:08:47 PM
Completed: Jun 02, 2026 3:52:23 PM
Total Duration: 43m 35s

Phases

Queue: 1s
Execution: 41m 22s
Stage/Unstage: 2m 12s