Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/4e6d32136f00a20eba98e29674e12c/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/4e6d32136f00a20eba98e29674e12c/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/061a4e45fe5c34840054bdbd7ef4c5/659_bMa-T1-TRNA-1_B23MHV2LT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1c/c9c1e191383e2e70962570ce18d668/659_bMa-T1-TRNA-1_B23MHV2LT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 659_bMa-T1-TRNA-1_B23MHV2LT4_1/abundance.h5
Successfully converted 659_bMa-T1-TRNA-1_B23MHV2LT4_1/abundance.h5 to 659_bMa-T1-TRNA-1_B23MHV2LT4_1_kallisto_mqc.tsv
  Sample: 659_bMa-T1-TRNA-1_B23MHV2LT4_1
  Mean Fragment Length: 115.1 bp
  Median Fragment Length: 110.0 bp
  pct_mito_est_counts: 0.015%
  pct_ribo_est_counts: 1.152%
  pct_hk_est_counts: 0.487%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.032%
  pct_ribo_tpm: 3.499%
  pct_hk_tpm: 0.742%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 4.749%