NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (659_bNS-T1-TRNA-1_B23MHV2LT4_1) - gitlab-rnafusion-build2782974-edge-cases-rund-63106737 - Workflow Tracker

Runs
gitlab-rnafu..nd-63106737
Tasks
GATK4_MARKDUPLICATES (659_bNS-T1-TRNA-1_B23MHV2LT4_1)

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Task Info

Status: succeeded
Hash: e41bbae62e5c
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 659_bNS-T1-TRNA-1_B23MHV2LT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: e8/6feeb1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e8/6feeb18e8d50997d1e215f85701b5e
Native ID: nf-e86feeb18e8d50997d1e215f85701b5e-11fa8

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 60.8 GB / 74.0 GB
Process I/O (rchar / wchar): 63.8 GB / 44.3 GB
Disk I/O (read / write): 22.7 GB / 44.3 GB
Host: i-0e668daebec9aee03 ( spot)

Runtime

Submitted: Jun 02, 2026 3:06:45 PM
Completed: Jun 02, 2026 3:50:40 PM
Total Duration: 43m 54s

Phases

Queue: 1s
Execution: 41m 40s
Stage/Unstage: 2m 13s