.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1200_S21)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/9dcdc7846ef672df2af083946f9b53/.command.log
Size: 873 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1200_S21)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d8/eeb0b024e6a80ed069aca789b30b20/ref_annot.bed
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/9dcdc7846ef672df2af083946f9b53/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/9dcdc7846ef672df2af083946f9b53/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/89f32d7ba259b6955163dcb3aa4120/rna_s1200_S21.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/40519d59f3e66c2b62883f0627d910/rna_s1200_S21.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

processing ref_annot.bed ... Done
[W::hts_idx_load3] The index file is older than the data file: rna_s1200_S21.Aligned.sortedByCoord.out.bam.bai
processing rna_s1200_S21.Aligned.sortedByCoord.out.bam ... Finished