succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 1m 18s 8s 11s 58s 577.5 MB 265% 257.7 MB 28.0 MB 195.7 MB 28.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 11s 2s 5s 4s 23.9 MB 162% 853.8 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 12s 2s 6s 4s 23.3 MB 164% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 28s 3s 3m 0s 1m 25s 35.5 GB 950% 45.3 GB 9.0 GB 8.3 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 33s 2s 3m 6s 1m 25s 35.5 GB 924% 46.3 GB 10.1 GB 8.1 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 10s 8s 56s 6s 551.4 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 20s 10s 1m 7s 3s 552.9 MB 196% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 14s 11s 1s 2s 70.5 MB 101% 14.8 MB 1.7 MB 0 bytes 1.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 14s 11s 2s 1s 69.0 MB 104% 17.6 MB 2.3 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 1m 37s 1s 1m 32s 4s 2.3 GB 113% 1.4 GB 6.0 MB 0 bytes 6.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 1m 59s 1s 1m 53s 5s 2.2 GB 112% 1.5 GB 9.4 MB 0 bytes 9.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 10m 50s 48s 8m 27s 1m 34s 35.8 GB 221% 40.4 GB 3.6 GB 1.6 GB 80.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 11m 42s 1m 5s 8m 59s 1m 37s 35.9 GB 215% 40.4 GB 3.7 GB 1.6 GB 89.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 4s 1s - - 14.6 MB 1649% 33.0 MB 27.9 KB 0 bytes 36.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 5s 2s 1s 2s 182.5 MB 688% 33.4 MB 40.3 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 12s 8s 1s 2s 128.0 MB 770% 59.8 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 13s 8s 2s 2s 128.0 MB 627% 66.1 MB 20.2 MB 0 bytes 20.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 29s 2s 16s 11s 3.2 GB 100% 1.3 GB 27.7 MB 4.0 KB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 2m 26s 2s 2m 19s 5s 2.8 GB 176% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 1m 40s 2s 1m 28s 10s 1.4 GB 297% 1.6 GB 19.3 MB 1.5 GB 19.4 MB 1
95 items found |
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