Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/e9fc6820dbb4f90a8f82151763124e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/c5936724debd1d1973be64e82a53c1/rna_s1221_S42.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/e9fc6820dbb4f90a8f82151763124e/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory