File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/10e58a8430745ca9af44e144e20135/.command.log
Size
2.2 KB
Task
NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:FLOWCELL_QC (REGRESSION)
Attempt

Content

View in new tab 
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/903ef132f1071743452576b6b3b5b7/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/903ef132f1071743452576b6b3b5b7/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/903ef132f1071743452576b6b3b5b7/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/80a14af13adb3c6165ea30ad2b89d1/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/1c8170444688b19b9daf8358017e7b/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/80a14af13adb3c6165ea30ad2b89d1/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/1c8170444688b19b9daf8358017e7b/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/10e58a8430745ca9af44e144e20135/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/a3e20f21847f14a86fe78aa186dec0/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/a3e20f21847f14a86fe78aa186dec0/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/80a14af13adb3c6165ea30ad2b89d1/output/Reports/Quality_Metrics.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/10e58a8430745ca9af44e144e20135/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-inputs/test_rnafusion/e2e_regression_bcl/rundir/RunInfo.xml
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/a3e20f21847f14a86fe78aa186dec0/output/Reports/Demultiplex_Stats.csv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/1c8170444688b19b9daf8358017e7b/output/Reports/Index_Hopping_Counts.csv
  Downloading: s3://natera-platform-sandbox/pipeline-inputs/test_rnafusion/e2e_regression_bcl/rundir/InterOp/TileMetricsOut.bin
==> STAGING COMPLETE (16 inputs)

INFO: InterOp files not provided, InterOp metrics will be null
Wrote flowcell_qc.csv with 7/13 metrics populated