succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 3m 28s 9s 12s 3m 6s 577.3 MB 110% 257.7 MB 28.0 MB 177.1 MB 28.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 12s 2s 5s 5s 23.3 MB 165% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 12s 2s 6s 4s 23.3 MB 162% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 3m 58s 3s 2m 51s 1m 4s 35.6 GB 1139% 45.3 GB 9.0 GB 2.8 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 26s 19s 2m 54s 1m 13s 35.6 GB 1099% 46.3 GB 10.1 GB 2.8 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 19s 7s 1m 7s 5s 495.4 MB 200% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 18s 7s 1m 6s 5s 502.0 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 3s 1s 1s 1s 83.0 MB 97% 14.8 MB 1.7 MB 0 bytes 1.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 5s 1s 2s 2s 67.7 MB 102% 17.6 MB 2.3 MB 0 bytes 2.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 1m 39s 20s 1m 13s 6s 2.3 GB 94% 1.4 GB 6.0 MB 0 bytes 6.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 2m 33s 2s 2m 26s 5s 2.3 GB 104% 1.5 GB 9.4 MB 0 bytes 9.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 10m 31s 49s 8m 22s 1m 19s 35.8 GB 222% 40.4 GB 3.6 GB 1.6 GB 80.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 10m 27s 50s 8m 17s 1m 19s 35.9 GB 221% 40.4 GB 3.7 GB 1.6 GB 89.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 8s 5s 1s 2s 13.6 MB 188% 32.9 MB 27.9 KB 0 bytes 36.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 4s 1s 1s 2s 13.9 MB 1336% 33.4 MB 40.3 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 14s 10s 1s 2s 127.3 MB 113% 59.8 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 6s 1s 2s 2s 127.6 MB 107% 66.1 MB 20.2 MB 0 bytes 20.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 45s 10s 26s 9s 3.2 GB 100% 1.3 GB 27.7 MB 4.0 KB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 3m 31s 11s 3m 13s 7s 2.8 GB 176% 1.7 GB 605.9 MB 0 bytes 606.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 38s 2s 2m 19s 17s 1.4 GB 261% 1.6 GB 19.4 MB 1.5 GB 19.4 MB 1
95 items found |
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