Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/69/036f78cd2444297b0308fdc0a323ea/multiqc_data
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/b7d89f7031ef8fc127c99b6c4a99e4/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/b7d89f7031ef8fc127c99b6c4a99e4/.command.run
==> STAGING COMPLETE (3 inputs)
Warning: duplicate target column 'PERCENT_DUPLICATES' from 'FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-percent_duplicates', skipping later column
Warning: duplicate target column 'PERCENT_GC' from 'FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-percent_gc', skipping later column
Warning: duplicate target column 'AVG_SEQUENCE_LENGTH' from 'FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-avg_sequence_length', skipping later column
Warning: duplicate target column 'MEDIAN_SEQUENCE_LENGTH' from 'FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-median_sequence_length', skipping later column
Warning: duplicate target column 'PERCENT_FAILS' from 'FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-percent_fails', skipping later column
Warning: duplicate target column 'TOTAL_SEQUENCES' from 'FastQC (trimmed)_mqc-generalstats-fastqc_trimmed-total_sequences', skipping later column