STAR-FUSION FILTERING SUMMARY
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Input file: rna_s1200_S21.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: rna_s1200_S21.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 493
Pass (CALL=1): 7 (1.4%)
Fail (CALL=0): 486 (98.6%)

Blacklist Flagging:
  Total blacklisted: 42
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 8: 315
  Excluded SpliceType: INCL_NON_REF_SPLICE: 112
  Blacklisted: 22
  Blacklisted; aih_curated_blacklist score(3): 12
  aih_curated_blacklist score(3): 8
  Excluded annotation pattern: HGNC_GENEFAM: 7
  Read count too low: 2 < 8: 3
  Read count too low: 7 < 8: 2
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 2
  Read count too low: 6 < 8: 1
  Read count too low: 5 < 8: 1
  Read count too low: 3 < 8: 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 167 fail (total: 167)
  NO_JUNCTION_READS_IDENTIFIED: 0 pass, 1 fail (total: 1)
  ONLY_REF_SPLICE: 7 pass, 318 fail (total: 325)