File Info

Filename
rna_s1200_S21.starfusion.starfusion.fusion_predictions.filtered.tsv
Full Path
s3://natera-rnd-pltf-dev-s3-gitlab-results/rnafusion/build2786062/regression-run/63191069/starfusion/rna_s1200_S21.starfusion.starfusion.fusion_predictions.filtered.tsv
Size
181.9 KB
Workflow Run
gitlab-rnafusion-build2786062-regression-run-63191069
Published
Jun 03, 2026 3:00 PM

Content

View in new tab
#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint JunctionReads SpanningFrags LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots breakpoint_ID blacklisted blacklist_reasons aih_curated_reason CALL filter_reason FILTER total_reads
FGFR3--TACC3 46 1 46.0 1.0 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ TACC3^ENSG00000013810.20 chr4:1739702:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:28051130:28061130,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:34880460:34890460,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:41244120:41254120,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:41260000:41270000,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:49350600:49360600,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:49402150:49412150,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:50174490:50184490,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:52961340:52971340,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:6243410:6253410,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:68040290:68050290,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:80529760:80539760,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:83249940:83259940,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:8425410:8435410,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:87889880:87899880,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:97233870:97243870,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:99213420:99223420,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:27149600:27159600,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:30722060:30732060,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:44764460:44774460,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54154280:54164280,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:56369770:56379770,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:57524010:57534010,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:61323240:61333240,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:65879710:65889710,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:90495290:90505290,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:9544450:9554450,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:26578090:26588090,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:33716140:33726140,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:35280880:35290880,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:41854800:41864800,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:49608860:49618860,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:60441500:60451500,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:61200620:61210620,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:65504970:65514970,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:69111040:69121040,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:72481000:72491000,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:93427820:93437820,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:13036270:13046270,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:21171910:21181910,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:22353200:22363200,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:28479970:28489970,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:4577000:4587000,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:52511650:52521650,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:67524780:67534780,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:69995900:70005900,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:79947230:79957230 &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:6194060:6204060 YES_LDAS 4.7294 GT 1.8892 AG 1.7819 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","Klijn_CellLines","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr4:0.05Mb]","LOCAL_REARRANGEMENT:+:[48122]"] chr4:1806934-chr4:1739702 False 1 PASS 47
LMNA--NTRK1 26 0 26.0 0.0 ONLY_REF_SPLICE LMNA^ENSG00000160789.23 chr1:156130773:+ NTRK1^ENSG00000198400.13 chr1:156874906:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:36363320:36373320,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:51281320:51291320,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:60878880:60888880,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:63699200:63709200,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:67566700:67576700,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:74283100:74293100,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:93263280:93273280,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:31411120:31421120,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:48911230:48921230,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:49502720:49512720,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:53244670:53254670,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:58614140:58624140,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:837380:847380,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:96068060:96078060,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:10266310:10276310,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:28659750:28669750,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:61339670:61349670,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:71272030:71282030,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:7999190:8009190,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:91269240:91279240,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:13375770:13385770,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:19005640:19015640,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:22891390:22901390,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:50758220:50768220,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:83123410:83133410,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:96862140:96872140 . YES_LDAS 2.6163 GT 1.7465 AG 1.5058 ["ChimerKB","ChimerPub","Cosmic","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.68Mb]"] chr1:156130773-chr1:156874906 False 1 PASS 26
FGFR3--BAIAP2L1 21 1 21.0 1.0 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 chr7:98362432:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:10416680:10426680,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:11271270:11281270,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:35109030:35119030,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:38838690:38848690,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:40392150:40402150,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:42849500:42859500,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:46057530:46067530,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:54511420:54521420,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:66861940:66871940,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:84946680:84956680,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:42089380:42099380,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:55616890:55626890,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:56578990:56588990,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:76883530:76893530,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:39082850:39092850,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:58463390:58473390,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:74943610:74953610,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:87706670:87716670,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:4348500:4358500,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:5140310:5150310,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:8342020:8352020 &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:20960190:20970190 YES_LDAS 2.2138 GT 1.8892 AG 1.8062 ["ChimerKB","Klijn_CellLines","ChimerPub","Cosmic","CCLE_StarF2019","INTERCHROMOSOMAL[chr4--chr7]"] chr4:1806934-chr7:98362432 False 1 PASS 22
ETV6--NTRK3 11 0 11.0 0.0 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11869969:+ NTRK3^ENSG00000140538.16 chr15:87940753:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:46890280:46900280,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:62249160:62259160,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:83615090:83625090,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:89693730:89703730,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:30913640:30923640,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54231830:54241830,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:96422090:96432090,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:14366840:14376840,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:46242410:46252410,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:83513290:83523290,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:98267340:98277340 . YES_LDAS 1.1069 GT 1.7819 AG 1.9656 ["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr12--chr15]"] chr12:11869969-chr15:87940753 False 1 PASS 11
KIF5B--RET 10 0 10.0 0.0 ONLY_REF_SPLICE KIF5B^ENSG00000170759.11 chr10:32017143:- RET^ENSG00000165731.20 chr10:43114480:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:50600840:50610840,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:62528620:62538620,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:61557770:61567770,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:1751670:1761670,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:90250180:90260180,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:98713850:98723850,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:10754780:10764780,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:22443210:22453210,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:89687090:89697090,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:96585540:96595540 . YES_LDAS 1.0063 GT 1.9656 AG 1.9656 ["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTRACHROMOSOMAL[chr10:11.02Mb]"] chr10:32017143-chr10:43114480 False 1 PASS 10
CD74--ROS1 10 0 10.0 0.0 ONLY_REF_SPLICE CD74^ENSG00000019582.16 chr5:150404680:- ROS1^ENSG00000047936.11 chr6:117324415:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:45221450:45231450,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:65779580:65789580,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:12516850:12526850,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:26182540:26192540,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:57529150:57539150,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:59193120:59203120,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:56356590:56366590,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:78948620:78958620,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:81680000:81690000,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:88080800:88090800 . YES_LDAS 1.0063 GT 1.7819 AG 1.7465 ["ChimerKB","ChimerSeq","TCGA_StarF2019","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr5--chr6]"] chr5:150404680-chr6:117324415 False 1 PASS 10
PAX8--PPARG 8 0 8.0 0.0 ONLY_REF_SPLICE PAX8^ENSG00000125618.18 chr2:113235394:- PPARG^ENSG00000132170.23 chr3:12379704:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:16887500:16897500,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:37680630:37690630,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:81157010:81167010,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:84478580:84488580,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:14604220:14614220,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:81025040:81035040,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:32146510:32156510,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:84808600:84818600 . YES_LDAS 0.805 GT 1.8295 AG 1.9329 ["Mitelman","ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr2--chr3]"] chr2:113235394-chr3:12379704 False 1 PASS 8
TFG--NTRK1 7 0 7.0 0.0 ONLY_REF_SPLICE TFG^ENSG00000114354.15 chr3:100732672:+ NTRK1^ENSG00000198400.13 chr1:156874571:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:70534020:70544020,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:21446870:21456870,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:31015700:31025700,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:62094520:62104520,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:13534050:13544050,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:20342280:20352280,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:8187220:8197220 . YES_LDAS 0.7044 GT 1.9329 AG 1.6895 ["ChimerKB","ChimerSeq","TCGA_StarF2019","HaasMedCancer","DEEPEST2019","chimerdb_pubmed","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr3--chr1]"] chr3:100732672-chr1:156874571 False 0 Read count too low: 7 < 8 FAIL 7
NCOA4--RET 7 0 7.0 0.0 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46012883:- RET^ENSG00000165731.20 chr10:43116584:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:12974860:12984860,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:53409600:53419600,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:11054120:11064120,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:15646250:15656250,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:17711310:17721310,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:64967110:64977110,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:99728030:99738030 . YES_LDAS 0.7044 GT 1.9086 AG 1.8323 ["ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:2.87Mb]"] chr10:46012883-chr10:43116584 False 0 Read count too low: 7 < 8 FAIL 7
CCDC6--RET 6 0 6.0 0.0 ONLY_REF_SPLICE CCDC6^ENSG00000108091.11 chr10:59906122:- RET^ENSG00000165731.20 chr10:43116584:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:93715690:93725690,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:9795350:9805350,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:96039050:96049050,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:60823020:60833020,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:6818570:6828570,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:71986860:71996860 . YES_LDAS 0.6038 GT 1.8892 AG 1.8323 ["Mitelman","ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:16.66Mb]"] chr10:59906122-chr10:43116584 False 0 Read count too low: 6 < 8 FAIL 6
SLC45A3--BRAF 5 0 5.0 0.0 ONLY_REF_SPLICE SLC45A3^ENSG00000158715.6 chr1:205680394:- BRAF^ENSG00000157764.14 chr7:140794467:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:38192480:38202480,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:57243320:57253320,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:66202390:66212390,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:15659710:15669710,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:7592960:7602960 . YES_LDAS 0.5031 GT 1.5628 AG 1.7465 ["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTERCHROMOSOMAL[chr1--chr7]"] chr1:205680394-chr7:140794467 False 0 Read count too low: 5 < 8 FAIL 5
RPL6--MT-RNR2 5 0 1.25 0.0 INCL_NON_REF_SPLICE RPL6^ENSG00000089009.16 chr12:112408420:- MT-RNR2^ENSG00000210082.2 chrM:2454:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:7338390:7348390,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:81089810:81099810,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:61326250:61336250,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:90981730:90991730,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:25472050:25482050 . NO_LDAS 0.1258 GT 1.9086 AG 1.2419 ["INTERCHROMOSOMAL[chr12--chrM]"] chr12:112408420-chrM:2454 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 5
EGFR--SEPTIN14 3 0 3.0 0.0 ONLY_REF_SPLICE EGFR^ENSG00000146648.19 chr7:55200413:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19530920:19540920,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:82738580:82748580,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:51624220:51634220 . YES_LDAS 0.3019 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr7:0.58Mb]"] chr7:55200413-chr7:55796092 False 0 Read count too low: 3 < 8 FAIL 3
COX4I2--IGL-@-ext 3 0 1.0 0.0 INCL_NON_REF_SPLICE COX4I2^ENSG00000131055.5 chr20:31639946:+ IGL-@-ext^IGL-.g@-ext chr22:22906776:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:3382780:3392780,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:25606690:25616690,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:37995560:38005560 . NO_LDAS 0.1006 AA 1.2419 AT 1.5219 ["INTERCHROMOSOMAL[chr20--chr22]"] chr20:31639946-chr22:22906776 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
WASH5P--WASH6P 3 1 3.0 1.0 ONLY_REF_SPLICE WASH5P^ENSG00000282458.1 chr19:66346:- WASH6P^ENSG00000182484.15 chrX:156021999:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:87064780:87074780,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:1670090:1680090,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:2801610:2811610 &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:62743400:62753400 YES_LDAS 0.4025 GT 1.9656 AG 1.8256 ["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chrX]"] chr19:66346-chrX:156021999 True pair|recurrent breakpoints 0 Blacklisted FAIL 4
TPM3--NTRK1 2 0 2.0 0.0 ONLY_REF_SPLICE TPM3^ENSG00000143549.21 chr1:154170400:- NTRK1^ENSG00000198400.13 chr1:156874571:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:68198860:68208860,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:59083260:59093260 . YES_LDAS 0.2013 GT 1.9329 AG 1.6895 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr1:2.62Mb]"] chr1:154170400-chr1:156874571 False 0 Read count too low: 2 < 8 FAIL 2
RBM14--RBM4 2 0 2.0 0.0 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ RBM4^ENSG00000173933.21 chr11:66639700:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:37758830:37768830,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:69702500:69712500 . YES_LDAS 0.2013 GT 1.7465 AG 1.9086 ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] chr11:66617057-chr11:66639700 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
LEPROTL1--SMG1P3 2 0 2.0 0.0 ONLY_REF_SPLICE LEPROTL1^ENSG00000104660.19 chr8:30104991:+ SMG1P3^ENSG00000180747.15 chr16:21487616:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:32516570:32526570,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:79641420:79651420 . NO_LDAS 0.2013 GC 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr16]"] chr8:30104991-chr16:21487616 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
EML4--ALK 2 0 2.0 0.0 ONLY_REF_SPLICE EML4^ENSG00000143924.19 chr2:42295516:+ ALK^ENSG00000171094.18 chr2:29223528:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:39670450:39680450,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:60475410:60485410 . YES_LDAS 0.2013 GT 1.6895 AG 1.9086 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr2:12.25Mb]"] chr2:42295516-chr2:29223528 False 0 Read count too low: 2 < 8 FAIL 2
DTX2--DTX1 2 0 2.0 0.0 ONLY_REF_SPLICE DTX2^ENSG00000091073.19 chr7:76503587:+ DTX1^ENSG00000135144.7 chr12:113095325:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:57977260:57987260,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:97099600:97109600 . NO_LDAS 0.2013 GT 1.9219 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr12]"] chr7:76503587-chr12:113095325 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 2
CHST11--MME 2 0 2.0 0.0 INCL_NON_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ MME^ENSG00000196549.13 chr3:155183570:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:16764490:16774490,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:63428760:63438760 . NO_LDAS 0.2013 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr3]"] chr12:104601991-chr3:155183570 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 2
CEPT1--MSN 2 0 2.0 0.0 INCL_NON_REF_SPLICE CEPT1^ENSG00000134255.14 chr1:111180361:+ MSN^ENSG00000147065.17 chrX:65727814:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:5644260:5654260,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:80900250:80910250 . NO_LDAS 0.2013 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chrX]"] chr1:111180361-chrX:65727814 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 2
BOLA2B--SMG1P2 2 0 1.0 0.0 INCL_NON_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30193358:- SMG1P2^ENSG00000205534.6 chr16:29548658:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:23676460:23686460,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:27382250:27392250 . YES_LDAS 0.1006 GT 1.9329 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:0.60Mb]"] chr16:30193358-chr16:29548658 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
AL590434.1--TMEM200A 2 0 1.0 0.0 ONLY_REF_SPLICE AL590434.1^ENSG00000284640.1 chr1:35146299:- TMEM200A^ENSG00000164484.12 chr6:130440407:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:66877340:66887340,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:70790410:70800410 . NO_LDAS 0.1006 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr6]"] chr1:35146299-chr6:130440407 False 0 Read count too low: 2 < 8 FAIL 2
AL139002.1--TMEM200A 2 0 1.0 0.0 ONLY_REF_SPLICE AL139002.1^ENSG00000233379.2 chr13:77975347:- TMEM200A^ENSG00000164484.12 chr6:130440407:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:66877340:66887340,&rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:70790410:70800410 . NO_LDAS 0.1006 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr13--chr6]"] chr13:77975347-chr6:130440407 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
ZNF720--ZNF254 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF720^ENSG00000197302.10 chr16:31723353:+ ZNF254^ENSG00000213096.11 chr19:24105940:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:63444030:63454030 . YES_LDAS 0.1006 GT 1.8892 AG 1.8892 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr16--chr19]"] chr16:31723353-chr19:24105940 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
ZNF565--CLEC17A 1 0 0.33 0.0 ONLY_REF_SPLICE ZNF565^ENSG00000196357.12 chr19:36214622:- CLEC17A^ENSG00000187912.12 chr19:14592281:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:26064650:26074650 . NO_LDAS 0.0332 GT 1.3996 AG 1.6402 ["INTRACHROMOSOMAL[chr19:21.57Mb]"] chr19:36214622-chr19:14592281 False 0 Read count too low: 1 < 8 FAIL 1
ZNF565--CLEC17A 1 0 0.33 0.0 ONLY_REF_SPLICE ZNF565^ENSG00000196357.12 chr19:36214622:- CLEC17A^ENSG00000187912.12 chr19:14587614:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:26064650:26074650 . NO_LDAS 0.0332 GT 1.3996 AG 1.6402 ["INTRACHROMOSOMAL[chr19:21.57Mb]"] chr19:36214622-chr19:14587614 False 0 Read count too low: 1 < 8 FAIL 1
ZNF565--CLEC17A 1 0 0.33 0.0 ONLY_REF_SPLICE ZNF565^ENSG00000196357.12 chr19:36214622:- CLEC17A^ENSG00000187912.12 chr19:14583357:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:26064650:26074650 . NO_LDAS 0.0332 GT 1.3996 AG 1.6402 ["INTRACHROMOSOMAL[chr19:21.57Mb]"] chr19:36214622-chr19:14583357 False 0 Read count too low: 1 < 8 FAIL 1
ZNF516--ACTN4 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF516^ENSG00000101493.11 chr18:76379050:- ACTN4^ENSG00000130402.13 chr19:38717948:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:76230740:76240740 . YES_LDAS 0.1006 GC 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr19]"] chr18:76379050-chr19:38717948 False 0 Read count too low: 1 < 8 FAIL 1
ZNF398--ZNF786 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF398^ENSG00000197024.9 chr7:149154340:+ ZNF786^ENSG00000197362.15 chr7:149074538:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:23315030:23325030 . YES_LDAS 0.1006 GT 1.8892 AG 1.9656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:0.04Mb]","LOCAL_INVERSION:+:-:[35634]"] chr7:149154340-chr7:149074538 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZNF398--METTL2A 1 0 0.5 0.0 ONLY_REF_SPLICE ZNF398^ENSG00000197024.9 chr7:149154340:+ METTL2A^ENSG00000087995.16 chr17:62440617:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:7230230:7240230 . YES_LDAS 0.0503 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr17]"] chr7:149154340-chr17:62440617 False 0 Read count too low: 1 < 8 FAIL 1
ZNF316--COQ9 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF316^ENSG00000205903.7 chr7:6637976:+ COQ9^ENSG00000088682.14 chr16:57456504:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:92863850:92873850 . NO_LDAS 0.1006 GT 1.5656 AG 1.5219 ["INTERCHROMOSOMAL[chr7--chr16]"] chr7:6637976-chr16:57456504 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF274--RFC2 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF274^ENSG00000171606.18 chr19:58183998:+ RFC2^ENSG00000049541.11 chr7:74249118:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:29725260:29735260 . NO_LDAS 0.1006 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr7]"] chr19:58183998-chr7:74249118 False 0 Read count too low: 1 < 8 FAIL 1
ZMYM4--SREBF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZMYM4^ENSG00000146463.12 chr1:35405150:+ SREBF1^ENSG00000072310.17 chr17:17819665:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:53269690:53279690 . YES_LDAS 0.1006 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr17]"] chr1:35405150-chr17:17819665 False 0 Read count too low: 1 < 8 FAIL 1
ZMYM4--RREB1 1 0 1.0 0.0 ONLY_REF_SPLICE ZMYM4^ENSG00000146463.12 chr1:35325405:+ RREB1^ENSG00000124782.20 chr6:7176655:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:81038830:81048830 . YES_LDAS 0.1006 GT 1.7465 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr6]"] chr1:35325405-chr6:7176655 False 0 Read count too low: 1 < 8 FAIL 1
ZMAT2--AQP4 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZMAT2^ENSG00000146007.11 chr5:140705842:+ AQP4^ENSG00000171885.18 chr18:26856045:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:6768190:6778190 . NO_LDAS 0.1006 GT 1.5546 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr18]"] chr5:140705842-chr18:26856045 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZFP62--ZNF660 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZFP62^ENSG00000196670.14 chr5:180850723:- ZNF660^ENSG00000144792.9 chr3:44595112:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:21829650:21839650 . YES_LDAS 0.1006 GT 1.5656 AG 1.9329 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr5--chr3]"] chr5:180850723-chr3:44595112 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZDHHC5--SPCS2 1 0 0.5 0.0 ONLY_REF_SPLICE ZDHHC5^ENSG00000156599.11 chr11:57673194:+ SPCS2^ENSG00000118363.12 chr11:74965034:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:18031260:18041260 . NO_LDAS 0.0503 GT 1.5329 AG 1.5656 ["INTRACHROMOSOMAL[chr11:17.25Mb]"] chr11:57673194-chr11:74965034 False 0 Read count too low: 1 < 8 FAIL 1
ZCCHC7--NBAS 1 0 1.0 0.0 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37126942:+ NBAS^ENSG00000151779.13 chr2:15417712:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:89923330:89933330 . YES_LDAS 0.1006 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr9--chr2]"] chr9:37126942-chr2:15417712 False 0 Read count too low: 1 < 8 FAIL 1
ZCCHC7--IGL-@-ext 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37126943:+ IGL-@-ext^IGL-.g@-ext chr22:22629900:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:47563420:47573420 . NO_LDAS 0.1006 TT 1.9656 GC 1.7232 ["INTERCHROMOSOMAL[chr9--chr22]"] chr9:37126943-chr22:22629900 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
Z95118.1--RPL37A 1 0 1.0 0.0 INCL_NON_REF_SPLICE Z95118.1^ENSG00000231559.1 chr6:108817819:+ RPL37A^ENSG00000197756.10 chr2:216499963:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:33500550:33510550 . YES_LDAS 0.1006 GT 1.6402 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr2]"] chr6:108817819-chr2:216499963 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
YWHAQ--DERA 1 0 1.0 0.0 ONLY_REF_SPLICE YWHAQ^ENSG00000134308.14 chr2:9630159:- DERA^ENSG00000023697.13 chr12:15982308:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:9319630:9329630 . NO_LDAS 0.1006 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chr12]"] chr2:9630159-chr12:15982308 False 0 Read count too low: 1 < 8 FAIL 1
YTHDC2--RPL29 1 0 1.0 0.0 INCL_NON_REF_SPLICE YTHDC2^ENSG00000047188.16 chr5:113581607:+ RPL29^ENSG00000162244.12 chr3:51993862:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:5935220:5945220 . NO_LDAS 0.1006 GT 1.9329 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr3]"] chr5:113581607-chr3:51993862 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YTHDC1--SH2B3 1 0 0.5 0.0 INCL_NON_REF_SPLICE YTHDC1^ENSG00000083896.13 chr4:68333231:- SH2B3^ENSG00000111252.11 chr12:111448356:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:8392550:8402550 . NO_LDAS 0.0503 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr4--chr12]"] chr4:68333231-chr12:111448356 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YTHDC1--GLB1 1 0 0.5 0.0 INCL_NON_REF_SPLICE YTHDC1^ENSG00000083896.13 chr4:68333231:- GLB1^ENSG00000170266.16 chr3:33051891:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:8392550:8402550 . NO_LDAS 0.0503 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr3]"] chr4:68333231-chr3:33051891 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YAF2--RYBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE YAF2^ENSG00000015153.15 chr12:42238155:- RYBP^ENSG00000163602.11 chr3:72446621:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:63425070:63435070 . YES_LDAS 0.1006 GT 1.5656 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr3]"] chr12:42238155-chr3:72446621 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
XRN2--CEP83 1 0 1.0 0.0 ONLY_REF_SPLICE XRN2^ENSG00000088930.8 chr20:21303473:+ CEP83^ENSG00000173588.15 chr12:94335664:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:3823200:3833200 . YES_LDAS 0.1006 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr12]"] chr20:21303473-chr12:94335664 False 0 Read count too low: 1 < 8 FAIL 1
XPO4--ZMYM2 1 0 1.0 0.0 ONLY_REF_SPLICE XPO4^ENSG00000132953.17 chr13:20790462:- ZMYM2^ENSG00000121741.17 chr13:20002850:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:70888830:70898830 . YES_LDAS 0.1006 GT 1.9899 AG 1.8323 ["INTRACHROMOSOMAL[chr13:0.69Mb]"] chr13:20790462-chr13:20002850 False 0 Read count too low: 1 < 8 FAIL 1
XPO4--TPP2 1 0 1.0 0.0 ONLY_REF_SPLICE XPO4^ENSG00000132953.17 chr13:20790462:- TPP2^ENSG00000134900.12 chr13:102614101:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:97750570:97760570 . YES_LDAS 0.1006 GT 1.9899 AG 1.9899 ["INTRACHROMOSOMAL[chr13:81.69Mb]"] chr13:20790462-chr13:102614101 False 0 Read count too low: 1 < 8 FAIL 1
WDR1--SLAIN1 1 0 0.5 0.0 INCL_NON_REF_SPLICE WDR1^ENSG00000071127.17 chr4:10093122:- SLAIN1^ENSG00000139737.22 chr13:77698142:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:47167310:47177310 . NO_LDAS 0.0503 GC 1.6895 AG 1.585 ["INTERCHROMOSOMAL[chr4--chr13]"] chr4:10093122-chr13:77698142 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WDFY4--CEP250 1 0 1.0 0.0 INCL_NON_REF_SPLICE WDFY4^ENSG00000128815.19 chr10:48817409:+ CEP250^ENSG00000126001.16 chr20:35512341:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:76741840:76751840 . NO_LDAS 0.1006 GT 1.8256 AG 1.3753 ["INTERCHROMOSOMAL[chr10--chr20]"] chr10:48817409-chr20:35512341 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VRK1--SETD3 1 0 1.0 0.0 ONLY_REF_SPLICE VRK1^ENSG00000100749.9 chr14:96797447:+ SETD3^ENSG00000183576.13 chr14:99413934:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:29133370:29143370 . YES_LDAS 0.1006 GT 1.7465 AG 1.6729 ["INTRACHROMOSOMAL[chr14:2.44Mb]"] chr14:96797447-chr14:99413934 False 0 Read count too low: 1 < 8 FAIL 1
VPS26C--CCND2P1 1 0 0.5 0.0 INCL_NON_REF_SPLICE VPS26C^ENSG00000157538.14 chr21:37228242:- CCND2P1^ENSG00000256847.1 chr11:63243220:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:76261430:76271430 . NO_LDAS 0.0503 GT 1.8295 AG 1.9219 ["INTERCHROMOSOMAL[chr21--chr11]"] chr21:37228242-chr11:63243220 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VPS13B--ZMAT1 1 0 1.0 0.0 ONLY_REF_SPLICE VPS13B^ENSG00000132549.19 chr8:99442635:+ ZMAT1^ENSG00000166432.15 chrX:101918633:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:44258830:44268830 . NO_LDAS 0.1006 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chrX]"] chr8:99442635-chrX:101918633 False 0 Read count too low: 1 < 8 FAIL 1
VOPP1--ITPR2 1 0 1.0 0.0 ONLY_REF_SPLICE VOPP1^ENSG00000154978.13 chr7:55521072:- ITPR2^ENSG00000123104.12 chr12:26602706:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:33267740:33277740 . NO_LDAS 0.1006 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr12]"] chr7:55521072-chr12:26602706 False 0 Read count too low: 1 < 8 FAIL 1
VCP--HMGB2P1 1 0 1.0 0.0 INCL_NON_REF_SPLICE VCP^ENSG00000165280.18 chr9:35062003:- HMGB2P1^ENSG00000267736.2 chr19:1203413:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:62903470:62913470 . NO_LDAS 0.1006 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr19]"] chr9:35062003-chr19:1203413 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VAV2--SLCO5A1 1 0 0.5 0.0 ONLY_REF_SPLICE VAV2^ENSG00000160293.17 chr9:133992075:- SLCO5A1^ENSG00000137571.11 chr8:69833169:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:94821270:94831270 . YES_LDAS 0.0503 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr8]"] chr9:133992075-chr8:69833169 False 0 Read count too low: 1 < 8 FAIL 1
VAV2--SLCO5A1 1 0 0.5 0.0 INCL_NON_REF_SPLICE VAV2^ENSG00000160293.17 chr9:133992082:- SLCO5A1^ENSG00000137571.11 chr8:69833472:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:94821270:94831270 . NO_LDAS 0.0503 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr9--chr8]"] chr9:133992082-chr8:69833472 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
VAPA--CEP192 1 0 1.0 0.0 ONLY_REF_SPLICE VAPA^ENSG00000101558.14 chr18:9931962:+ CEP192^ENSG00000101639.18 chr18:12999421:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:41855670:41865670 . YES_LDAS 0.1006 GT 1.8892 AG 1.585 ["INTRACHROMOSOMAL[chr18:3.03Mb]"] chr18:9931962-chr18:12999421 False 0 Read count too low: 1 < 8 FAIL 1
USP48--P2RY8 1 0 1.0 0.0 ONLY_REF_SPLICE USP48^ENSG00000090686.16 chr1:21782824:- P2RY8^ENSG00000182162.11 chrX:1466582:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:96236460:96246460 . YES_LDAS 0.1006 GT 1.7465 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chrX]"] chr1:21782824-chrX:1466582 False 0 Read count too low: 1 < 8 FAIL 1
USP48--NT5DC1 1 0 0.5 0.0 INCL_NON_REF_SPLICE USP48^ENSG00000090686.16 chr1:21757710:- NT5DC1^ENSG00000178425.14 chr6:116245743:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:91724450:91734450 . NO_LDAS 0.0503 AT 1.3383 AC 1.7056 ["INTERCHROMOSOMAL[chr1--chr6]"] chr1:21757710-chr6:116245743 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP48--KLF13 1 0 1.0 0.0 INCL_NON_REF_SPLICE USP48^ENSG00000090686.16 chr1:21721036:- KLF13^ENSG00000169926.11 chr15:31375531:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:13241190:13251190 . NO_LDAS 0.1006 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr15]"] chr1:21721036-chr15:31375531 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USP13--TBL1XR1 1 0 1.0 0.0 ONLY_REF_SPLICE USP13^ENSG00000058056.10 chr3:179653393:+ TBL1XR1^ENSG00000177565.18 chr3:177053918:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:86343650:86353650 . YES_LDAS 0.1006 GT 1.6402 AG 1.8295 ["INTRACHROMOSOMAL[chr3:2.43Mb]"] chr3:179653393-chr3:177053918 False 0 Read count too low: 1 < 8 FAIL 1
URM1--CPT1A 1 0 1.0 0.0 ONLY_REF_SPLICE URM1^ENSG00000167118.11 chr9:128378106:+ CPT1A^ENSG00000110090.13 chr11:68812576:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:21147060:21157060 . YES_LDAS 0.1006 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr11]"] chr9:128378106-chr11:68812576 False 0 Read count too low: 1 < 8 FAIL 1
UPF1--HSP90AB1 1 0 1.0 0.0 ONLY_REF_SPLICE UPF1^ENSG00000005007.13 chr19:18832440:+ HSP90AB1^ENSG00000096384.20 chr6:44253489:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:65402720:65412720 . YES_LDAS 0.1006 GT 1.7819 AG 1.585 ["INTERCHROMOSOMAL[chr19--chr6]"] chr19:18832440-chr6:44253489 False 0 Read count too low: 1 < 8 FAIL 1
UMAD1--GLCCI1 1 0 1.0 0.0 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7801743:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:17758910:17768910 . YES_LDAS 0.1006 GT 1.9656 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] chr7:7801743-chr7:8003908 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
UHRF2--NOP14 1 0 1.0 0.0 ONLY_REF_SPLICE UHRF2^ENSG00000147854.17 chr9:6413643:+ NOP14^ENSG00000087269.16 chr4:2942351:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:60957390:60967390 . YES_LDAS 0.1006 GT 1.8062 AG 1.8256 ["INTERCHROMOSOMAL[chr9--chr4]"] chr9:6413643-chr4:2942351 False 0 Read count too low: 1 < 8 FAIL 1
UBB--GTF3C2 1 0 1.0 0.0 INCL_NON_REF_SPLICE UBB^ENSG00000170315.14 chr17:16382438:+ GTF3C2^ENSG00000115207.13 chr2:27333973:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:94510940:94520940 . YES_LDAS 0.1006 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr2]"] chr17:16382438-chr2:27333973 False 0 Read count too low: 1 < 8 FAIL 1
TXNL4B--NUP188 1 0 1.0 0.0 ONLY_REF_SPLICE TXNL4B^ENSG00000140830.9 chr16:72088987:- NUP188^ENSG00000095319.14 chr9:128968506:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:85374230:85384230 . YES_LDAS 0.1006 GT 1.5656 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr9]"] chr16:72088987-chr9:128968506 False 0 Read count too low: 1 < 8 FAIL 1
TXN--IGL-@-ext 1 0 1.0 0.0 INCL_NON_REF_SPLICE TXN^ENSG00000136810.13 chr9:110256412:- IGL-@-ext^IGL-.g@-ext chr22:22710454:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:27544060:27554060 . NO_LDAS 0.1006 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr22]"] chr9:110256412-chr22:22710454 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TUBB6--ANKLE2 1 0 1.0 0.0 ONLY_REF_SPLICE TUBB6^ENSG00000176014.13 chr18:12311053:+ ANKLE2^ENSG00000176915.15 chr12:132755133:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:78018300:78028300 . YES_LDAS 0.1006 GT 1.8062 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr12]"] chr18:12311053-chr12:132755133 False 0 Read count too low: 1 < 8 FAIL 1
TTC38--SORCS3 1 0 1.0 0.0 INCL_NON_REF_SPLICE TTC38^ENSG00000075234.17 chr22:46273980:+ SORCS3^ENSG00000156395.14 chr10:105262455:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:40015770:40025770 . NO_LDAS 0.1006 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr10]"] chr22:46273980-chr10:105262455 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TTC14--CLASP2 1 0 1.0 0.0 ONLY_REF_SPLICE TTC14^ENSG00000163728.11 chr3:180607765:+ CLASP2^ENSG00000163539.17 chr3:33544841:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:68329010:68339010 . YES_LDAS 0.1006 GT 1.7968 AG 1.9329 ["INTRACHROMOSOMAL[chr3:146.88Mb]"] chr3:180607765-chr3:33544841 False 0 Read count too low: 1 < 8 FAIL 1
TTC1--GDAP1 1 0 1.0 0.0 ONLY_REF_SPLICE TTC1^ENSG00000113312.11 chr5:160043169:+ GDAP1^ENSG00000104381.14 chr8:74514459:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:97304300:97314300 . YES_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr8]"] chr5:160043169-chr8:74514459 False 0 Read count too low: 1 < 8 FAIL 1
TRMT1L--USP9Y 1 0 1.0 0.0 ONLY_REF_SPLICE TRMT1L^ENSG00000121486.12 chr1:185150379:- USP9Y^ENSG00000114374.13 chrY:12708634:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:52039800:52049800 . YES_LDAS 0.1006 GT 1.8256 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chrY]"] chr1:185150379-chrY:12708634 False 0 Read count too low: 1 < 8 FAIL 1
TRMT1L--RMND5B 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRMT1L^ENSG00000121486.12 chr1:185118871:- RMND5B^ENSG00000145916.19 chr5:178138108:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:55169600:55179600 . NO_LDAS 0.1006 GT 0.9056 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr5]"] chr1:185118871-chr5:178138108 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TPRXL--TIMELESS 1 0 1.0 0.0 ONLY_REF_SPLICE TPRXL^ENSG00000180438.15 chr3:14063508:+ TIMELESS^ENSG00000111602.12 chr12:56425152:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:68820210:68830210 . NO_LDAS 0.1006 GT 1.9656 AG 1.1033 ["INTERCHROMOSOMAL[chr3--chr12]"] chr3:14063508-chr12:56425152 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
TPM4--S1PR2 1 0 1.0 0.0 ONLY_REF_SPLICE TPM4^ENSG00000167460.17 chr19:16076697:+ S1PR2^ENSG00000267534.4 chr19:10224947:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:77216330:77226330 . YES_LDAS 0.1006 GT 1.5058 AG 1.9329 ["INTRACHROMOSOMAL[chr19:5.84Mb]"] chr19:16076697-chr19:10224947 False 0 Read count too low: 1 < 8 FAIL 1
TPM4--HBB 1 0 1.0 0.0 INCL_NON_REF_SPLICE TPM4^ENSG00000167460.17 chr19:16082039:+ HBB^ENSG00000244734.4 chr11:5226967:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:22758590:22768590 . NO_LDAS 0.1006 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr11]"] chr19:16082039-chr11:5226967 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TOX2--PHF13 1 0 1.0 0.0 ONLY_REF_SPLICE TOX2^ENSG00000124191.18 chr20:44054526:+ PHF13^ENSG00000116273.6 chr1:6616757:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:5629420:5639420 . YES_LDAS 0.1006 GT 1.4295 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr1]"] chr20:44054526-chr1:6616757 False 0 Read count too low: 1 < 8 FAIL 1
TNRC18--SEM1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TNRC18^ENSG00000182095.14 chr7:5359398:- SEM1^ENSG00000127922.9 chr7:96697300:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:24314540:24324540 . NO_LDAS 0.1006 GT 1.9899 AG 1.6402 ["INTRACHROMOSOMAL[chr7:91.06Mb]"] chr7:5359398-chr7:96697300 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TNFSF10--CSNK1G3 1 0 1.0 0.0 ONLY_REF_SPLICE TNFSF10^ENSG00000121858.11 chr3:172523253:- CSNK1G3^ENSG00000151292.17 chr5:123545417:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:9244060:9254060 . YES_LDAS 0.1006 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr5]"] chr3:172523253-chr5:123545417 False 0 Read count too low: 1 < 8 FAIL 1
TNFRSF17--SNX29 1 0 1.0 0.0 INCL_NON_REF_SPLICE TNFRSF17^ENSG00000048462.11 chr16:11967843:+ SNX29^ENSG00000048471.14 chr16:11999297:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:22423160:22433160 . NO_LDAS 0.1006 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr16:0.01Mb]","NEIGHBORS[8666]"] chr16:11967843-chr16:11999297 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
TMEM87A--SINHCAF 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM87A^ENSG00000103978.16 chr15:42272063:- SINHCAF^ENSG00000139146.14 chr12:31298224:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:42168860:42178860 . YES_LDAS 0.1006 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr12]"] chr15:42272063-chr12:31298224 False 0 Read count too low: 1 < 8 FAIL 1
TMEM18--GAK 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM18^ENSG00000151353.15 chr2:677289:- GAK^ENSG00000178950.17 chr4:904779:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:6451140:6461140 . YES_LDAS 0.1006 GT 1.7968 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr4]"] chr2:677289-chr4:904779 False 0 Read count too low: 1 < 8 FAIL 1
TMEM131L--HMGB1 1 0 0.5 0.0 ONLY_REF_SPLICE TMEM131L^ENSG00000121210.16 chr4:153604430:+ HMGB1^ENSG00000189403.15 chr13:30463694:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:60024360:60034360 . YES_LDAS 0.0503 GT 1.7232 AG 1.1033 ["INTERCHROMOSOMAL[chr4--chr13]"] chr4:153604430-chr13:30463694 False 0 Read count too low: 1 < 8 FAIL 1
TLK1--VPS13C 1 0 1.0 0.0 ONLY_REF_SPLICE TLK1^ENSG00000198586.14 chr2:171160290:- VPS13C^ENSG00000129003.19 chr15:62044255:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:31676840:31686840 . YES_LDAS 0.1006 GT 1.4566 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr15]"] chr2:171160290-chr15:62044255 False 0 Read count too low: 1 < 8 FAIL 1
TIPARP--MTRNR2L7 1 0 0.2 0.0 INCL_NON_REF_SPLICE TIPARP^ENSG00000163659.13 chr3:156703702:+ MTRNR2L7^ENSG00000256892.2 chr10:37602211:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:95931790:95941790 . NO_LDAS 0.0201 GT 1.3383 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr10]"] chr3:156703702-chr10:37602211 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
THOC2--CCDC15 1 0 1.0 0.0 ONLY_REF_SPLICE THOC2^ENSG00000125676.20 chrX:123732952:- CCDC15^ENSG00000149548.15 chr11:124954724:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:34845790:34855790 . NO_LDAS 0.1006 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr11]"] chrX:123732952-chr11:124954724 False 0 Read count too low: 1 < 8 FAIL 1
TFAM--RACGAP1 1 0 0.5 0.0 INCL_NON_REF_SPLICE TFAM^ENSG00000108064.11 chr10:58386338:+ RACGAP1^ENSG00000161800.13 chr12:49999717:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:97868060:97878060 . NO_LDAS 0.0503 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr12]"] chr10:58386338-chr12:49999717 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TEP1--SCN5A 1 0 1.0 0.0 INCL_NON_REF_SPLICE TEP1^ENSG00000129566.13 chr14:20378974:- SCN5A^ENSG00000183873.18 chr3:38549716:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:94287190:94297190 . NO_LDAS 0.1006 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr3]"] chr14:20378974-chr3:38549716 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TCF12--IGH-@-ext 1 0 0.5 0.0 INCL_NON_REF_SPLICE TCF12^ENSG00000140262.18 chr15:57197825:+ IGH-@-ext^IGH-.g@-ext chr14:106295493:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:36188140:36198140 . NO_LDAS 0.0503 GT 1.4566 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr14]"] chr15:57197825-chr14:106295493 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TCF12--EPN1 1 0 0.5 0.0 INCL_NON_REF_SPLICE TCF12^ENSG00000140262.18 chr15:57197825:+ EPN1^ENSG00000063245.15 chr19:55702816:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:36188140:36198140 . NO_LDAS 0.0503 GT 1.4566 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr19]"] chr15:57197825-chr19:55702816 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
TBC1D5--SMAP2 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D5^ENSG00000131374.14 chr3:17307992:- SMAP2^ENSG00000084070.12 chr1:40406736:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:3631030:3641030 . NO_LDAS 0.1006 GT 1.9899 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr1]"] chr3:17307992-chr1:40406736 False 0 Read count too low: 1 < 8 FAIL 1
TBC1D5--OXSR1 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D5^ENSG00000131374.14 chr3:17623849:- OXSR1^ENSG00000172939.9 chr3:38183003:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:96937690:96947690 . NO_LDAS 0.1006 GT 1.8295 AG 1.7968 ["INTRACHROMOSOMAL[chr3:20.42Mb]"] chr3:17623849-chr3:38183003 False 0 Read count too low: 1 < 8 FAIL 1
TBC1D23--TFG 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D23^ENSG00000036054.13 chr3:100281847:+ TFG^ENSG00000114354.15 chr3:100732508:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:98493830:98503830 . NO_LDAS 0.1006 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr3:0.38Mb]"] chr3:100281847-chr3:100732508 False 0 Read count too low: 1 < 8 FAIL 1
SUPT6H--KIAA0100 1 0 1.0 0.0 ONLY_REF_SPLICE SUPT6H^ENSG00000109111.15 chr17:28676430:+ KIAA0100^ENSG00000007202.15 chr17:28642335:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:812100:822100 . YES_LDAS 0.1006 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr17:0.02Mb]","LOCAL_INVERSION:+:-:[16744]"] chr17:28676430-chr17:28642335 False 0 Read count too low: 1 < 8 FAIL 1
SUB1--NNT 1 0 1.0 0.0 ONLY_REF_SPLICE SUB1^ENSG00000113387.12 chr5:32591685:+ NNT^ENSG00000112992.18 chr5:43675511:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:6233520:6243520 . NO_LDAS 0.1006 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr5:11.00Mb]"] chr5:32591685-chr5:43675511 False 0 Read count too low: 1 < 8 FAIL 1
STX16--NPEPL1 1 0 1.0 0.0 ONLY_REF_SPLICE STX16^ENSG00000124222.22 chr20:58673711:+ NPEPL1^ENSG00000215440.12 chr20:58691724:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:47307600:47317600 . NO_LDAS 0.1006 GT 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr20:0.01Mb]","NEIGHBORS[9605]"] chr20:58673711-chr20:58691724 False 0 Read count too low: 1 < 8 FAIL 1
STRN4--MRPS21 1 0 1.0 0.0 ONLY_REF_SPLICE STRN4^ENSG00000090372.15 chr19:46746149:- MRPS21^ENSG00000266472.6 chr1:150308048:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:67089250:67099250 . YES_LDAS 0.1006 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:46746149-chr1:150308048 False 0 Read count too low: 1 < 8 FAIL 1
STAT1--MTR 1 0 1.0 0.0 ONLY_REF_SPLICE STAT1^ENSG00000115415.20 chr2:191013525:- MTR^ENSG00000116984.15 chr1:236803428:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:43030620:43040620 . YES_LDAS 0.1006 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr1]"] chr2:191013525-chr1:236803428 False 0 Read count too low: 1 < 8 FAIL 1
SRIP1--SRI 1 0 1.0 0.0 INCL_NON_REF_SPLICE SRIP1^ENSG00000248660.1 chr4:58103246:+ SRI^ENSG00000075142.14 chr7:88209439:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:77980820:77990820 . NO_LDAS 0.1006 GT 1.5219 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr7]"] chr4:58103246-chr7:88209439 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SPTBN1--RNF34 1 0 1.0 0.0 INCL_NON_REF_SPLICE SPTBN1^ENSG00000115306.16 chr2:54621488:+ RNF34^ENSG00000170633.16 chr12:121423386:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:95150810:95160810 . YES_LDAS 0.1006 GT 1.9899 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr12]"] chr2:54621488-chr12:121423386 False 0 Read count too low: 1 < 8 FAIL 1
SPTBN1--MYCLP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE SPTBN1^ENSG00000115306.16 chr2:54666088:+ MYCLP2^ENSG00000228004.1 chrX:57934523:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:27900730:27910730 . NO_LDAS 0.1006 GT 1.9656 AG 1.6049 ["INTERCHROMOSOMAL[chr2--chrX]"] chr2:54666088-chrX:57934523 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SPEN--KDM2B 1 0 1.0 0.0 ONLY_REF_SPLICE SPEN^ENSG00000065526.12 chr1:15848150:+ KDM2B^ENSG00000089094.19 chr12:121453344:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:75618400:75628400 . YES_LDAS 0.1006 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr12]"] chr1:15848150-chr12:121453344 False 0 Read count too low: 1 < 8 FAIL 1
SPAG9--AC114801.3 1 0 0.2 0.0 INCL_NON_REF_SPLICE SPAG9^ENSG00000008294.21 chr17:51021246:- AC114801.3^ENSG00000249072.1 chr4:78008532:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:63463540:63473540 . NO_LDAS 0.0201 GT 1.7465 AG 1.371 ["INTERCHROMOSOMAL[chr17--chr4]"] chr17:51021246-chr4:78008532 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SOS2--TTLL5 1 0 1.0 0.0 ONLY_REF_SPLICE SOS2^ENSG00000100485.12 chr14:50145170:- TTLL5^ENSG00000119685.20 chr14:75820007:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:69108520:69118520 . YES_LDAS 0.1006 GT 1.9899 AG 1.8295 ["INTRACHROMOSOMAL[chr14:25.40Mb]"] chr14:50145170-chr14:75820007 False 0 Read count too low: 1 < 8 FAIL 1
SOS1--PREPL 1 0 1.0 0.0 ONLY_REF_SPLICE SOS1^ENSG00000115904.14 chr2:39120336:- PREPL^ENSG00000138078.16 chr2:44346390:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:37166490:37176490 . YES_LDAS 0.1006 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr2:5.19Mb]"] chr2:39120336-chr2:44346390 False 0 Read count too low: 1 < 8 FAIL 1
SORD2P--AKR1B15 1 0 0.5 0.0 ONLY_REF_SPLICE SORD2P^ENSG00000259479.6 chr15:44828450:- AKR1B15^ENSG00000227471.9 chr7:134564598:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:60974100:60984100 . YES_LDAS 0.0503 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr7]"] chr15:44828450-chr7:134564598 False 0 Read count too low: 1 < 8 FAIL 1
SORD2P--AC007317.1 1 0 0.5 0.0 ONLY_REF_SPLICE SORD2P^ENSG00000259479.6 chr15:44828450:- AC007317.1^ENSG00000285898.1 chr2:40677586:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:60974100:60984100 . YES_LDAS 0.0503 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr2]"] chr15:44828450-chr2:40677586 False 0 Read count too low: 1 < 8 FAIL 1
SNX17--EEF1B2 1 0 0.25 0.0 ONLY_REF_SPLICE SNX17^ENSG00000115234.11 chr2:27373311:+ EEF1B2^ENSG00000114942.14 chr2:206162038:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:92854070:92864070 . NO_LDAS 0.0252 GT 1.8256 AG 1.5329 ["INTRACHROMOSOMAL[chr2:178.78Mb]"] chr2:27373311-chr2:206162038 False 0 Read count too low: 1 < 8 FAIL 1
SNX1--HOXB-AS4 1 0 1.0 0.0 INCL_NON_REF_SPLICE SNX1^ENSG00000028528.15 chr15:64118244:+ HOXB-AS4^ENSG00000242207.1 chr17:48628813:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:7048070:7058070 . NO_LDAS 0.1006 GT 1.9329 AG 1.3996 ["INTERCHROMOSOMAL[chr15--chr17]"] chr15:64118244-chr17:48628813 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SNU13--SAT1 1 0 1.0 0.0 ONLY_REF_SPLICE SNU13^ENSG00000100138.15 chr22:41688794:- SAT1^ENSG00000130066.16 chrX:23783658:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:62352620:62362620 . YES_LDAS 0.1006 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chrX]"] chr22:41688794-chrX:23783658 False 0 Read count too low: 1 < 8 FAIL 1
SNTB1--NCALD 1 0 1.0 0.0 ONLY_REF_SPLICE SNTB1^ENSG00000172164.15 chr8:120811273:- NCALD^ENSG00000104490.18 chr8:101719648:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:60457010:60467010 . NO_LDAS 0.1006 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr8:18.41Mb]"] chr8:120811273-chr8:101719648 False 0 Read count too low: 1 < 8 FAIL 1
SMG7--RPS6KC1 1 0 1.0 0.0 ONLY_REF_SPLICE SMG7^ENSG00000116698.21 chr1:183544497:+ RPS6KC1^ENSG00000136643.12 chr1:213242569:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:55593570:55603570 . NO_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr1:29.45Mb]"] chr1:183544497-chr1:213242569 False 0 Read count too low: 1 < 8 FAIL 1
SMG1--NPIPB12 1 0 0.11 0.0 INCL_NON_REF_SPLICE SMG1^ENSG00000157106.17 chr16:18858170:- NPIPB12^ENSG00000169203.16 chr16:29505872:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:59983940:59993940 . YES_LDAS 0.0111 GT 1.4566 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:10.56Mb]"] chr16:18858170-chr16:29505872 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SLC9A7--STIM1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC9A7^ENSG00000065923.10 chrX:46758705:- STIM1^ENSG00000167323.12 chr11:3967552:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:75803890:75813890 . YES_LDAS 0.1006 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr11]"] chrX:46758705-chr11:3967552 False 0 Read count too low: 1 < 8 FAIL 1
SLC7A5P1--SMG1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC7A5P1^ENSG00000260727.2 chr16:29613103:- SMG1^ENSG00000157106.17 chr16:18900044:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:90873940:90883940 . YES_LDAS 0.1006 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr16:10.69Mb]"] chr16:29613103-chr16:18900044 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SLC44A2--PHF13 1 0 1.0 0.0 ONLY_REF_SPLICE SLC44A2^ENSG00000129353.15 chr19:10602561:+ PHF13^ENSG00000116273.6 chr1:6616757:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:6903450:6913450 . YES_LDAS 0.1006 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:10602561-chr1:6616757 False 0 Read count too low: 1 < 8 FAIL 1
SLC34A2--ROS1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC34A2^ENSG00000157765.13 chr4:25664330:+ ROS1^ENSG00000047936.11 chr6:117324415:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:21104900:21114900 . NO_LDAS 0.1006 GT 1.8892 AG 1.7465 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","Klijn_CellLines","GUO2018CR_TCGA","chimerdb_pubmed","ChimerPub","Cosmic","INTERCHROMOSOMAL[chr4--chr6]"] chr4:25664330-chr6:117324415 False 0 Read count too low: 1 < 8 FAIL 1
SLC25A6--SLC25A5P6 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC25A6^ENSG00000169100.14 chrX:1391899:- SLC25A5P6^ENSG00000213332.4 chr4:186329492:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:22703760:22713760 . YES_LDAS 0.1006 GT 1.9656 AG 1.8892 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrX--chr4]"] chrX:1391899-chr4:186329492 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
SLC25A26--SLC5A12 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC25A26^ENSG00000144741.18 chr3:66263379:+ SLC5A12^ENSG00000148942.15 chr11:26669558:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:36857390:36867390 . NO_LDAS 0.1006 GT 1.8062 AG 1.231 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr11]"] chr3:66263379-chr11:26669558 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
SLC25A17--TXLNGY 1 0 1.0 0.0 ONLY_REF_SPLICE SLC25A17^ENSG00000100372.15 chr22:40819195:- TXLNGY^ENSG00000131002.12 chrY:19589527:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:1673420:1683420 . NO_LDAS 0.1006 GT 1.6402 AG 1.3996 ["INTERCHROMOSOMAL[chr22--chrY]"] chr22:40819195-chrY:19589527 False 0 Read count too low: 1 < 8 FAIL 1
SLC15A4--POLE 1 0 1.0 0.0 ONLY_REF_SPLICE SLC15A4^ENSG00000139370.12 chr12:128814775:- POLE^ENSG00000177084.18 chr12:132681279:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:18241950:18251950 . YES_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr12:3.80Mb]"] chr12:128814775-chr12:132681279 False 0 Read count too low: 1 < 8 FAIL 1
SLC11A2--BTBD6 1 0 1.0 0.0 ONLY_REF_SPLICE SLC11A2^ENSG00000110911.17 chr12:51008476:- BTBD6^ENSG00000184887.13 chr14:105248782:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:97034070:97044070 . YES_LDAS 0.1006 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr14]"] chr12:51008476-chr14:105248782 False 0 Read count too low: 1 < 8 FAIL 1
SLAMF6--SLAMF1 1 0 1.0 0.0 ONLY_REF_SPLICE SLAMF6^ENSG00000162739.14 chr1:160523144:- SLAMF1^ENSG00000117090.15 chr1:160612580:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:52339390:52349390 . YES_LDAS 0.1006 GT 1.8256 AG 1.8892 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr1:0.08Mb]","LOCAL_REARRANGEMENT:-:[84844]"] chr1:160523144-chr1:160612580 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
SH3KBP1--SMS 1 0 1.0 0.0 ONLY_REF_SPLICE SH3KBP1^ENSG00000147010.18 chrX:19887307:- SMS^ENSG00000102172.16 chrX:21967196:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:65986040:65996040 . YES_LDAS 0.1006 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chrX:2.05Mb]"] chrX:19887307-chrX:21967196 False 0 Read count too low: 1 < 8 FAIL 1
SH3BP2--MTA2 1 0 1.0 0.0 ONLY_REF_SPLICE SH3BP2^ENSG00000087266.17 chr4:2824730:+ MTA2^ENSG00000149480.7 chr11:62598390:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:62192930:62202930 . YES_LDAS 0.1006 GT 1.3996 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr11]"] chr4:2824730-chr11:62598390 False 0 Read count too low: 1 < 8 FAIL 1
SFPQ--EMSY 1 0 1.0 0.0 INCL_NON_REF_SPLICE SFPQ^ENSG00000116560.11 chr1:35184151:- EMSY^ENSG00000158636.16 chr11:76526496:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:42898820:42908820 . YES_LDAS 0.1006 GT 0.6998 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr11]"] chr1:35184151-chr11:76526496 False 0 Read count too low: 1 < 8 FAIL 1
SETX--SPG21 1 0 0.5 0.0 INCL_NON_REF_SPLICE SETX^ENSG00000107290.14 chr9:132346265:- SPG21^ENSG00000090487.11 chr15:64988816:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:44938110:44948110 . NO_LDAS 0.0503 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr15]"] chr9:132346265-chr15:64988816 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SETX--FBXO4 1 0 0.5 0.0 INCL_NON_REF_SPLICE SETX^ENSG00000107290.14 chr9:132346265:- FBXO4^ENSG00000151876.13 chr5:41928518:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:44938110:44948110 . NO_LDAS 0.0503 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr5]"] chr9:132346265-chr5:41928518 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SEPTIN9--SNRPA 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEPTIN9^ENSG00000184640.20 chr17:77487552:+ SNRPA^ENSG00000077312.9 chr19:40765069:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:7066680:7076680 . YES_LDAS 0.1006 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:77487552-chr19:40765069 False 0 Read count too low: 1 < 8 FAIL 1
SENP1--OGFOD1 1 0 1.0 0.0 ONLY_REF_SPLICE SENP1^ENSG00000079387.14 chr12:48063710:- OGFOD1^ENSG00000087263.17 chr16:56462534:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:40185970:40195970 . YES_LDAS 0.1006 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr16]"] chr12:48063710-chr16:56462534 False 0 Read count too low: 1 < 8 FAIL 1
SEC22C--OGA 1 0 1.0 0.0 ONLY_REF_SPLICE SEC22C^ENSG00000093183.14 chr3:42568865:- OGA^ENSG00000198408.14 chr10:101791439:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:73976560:73986560 . YES_LDAS 0.1006 GT 1.8323 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr10]"] chr3:42568865-chr10:101791439 False 0 Read count too low: 1 < 8 FAIL 1
SEC14L1--USP7 1 0 1.0 0.0 ONLY_REF_SPLICE SEC14L1^ENSG00000129657.16 chr17:77143659:+ USP7^ENSG00000187555.16 chr16:8905331:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:14047310:14057310 . NO_LDAS 0.1006 GT 1.7819 AG 1.5301 ["INTERCHROMOSOMAL[chr17--chr16]"] chr17:77143659-chr16:8905331 False 0 Read count too low: 1 < 8 FAIL 1
SCAF11--ARID2 1 0 1.0 0.0 ONLY_REF_SPLICE SCAF11^ENSG00000139218.18 chr12:45945249:- ARID2^ENSG00000189079.17 chr12:45836589:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:95282240:95292240 . NO_LDAS 0.1006 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr12:0.01Mb]","LOCAL_INVERSION:-:+:[11091]"] chr12:45945249-chr12:45836589 False 0 Read count too low: 1 < 8 FAIL 1
SBNO1--KNTC1 1 0 1.0 0.0 ONLY_REF_SPLICE SBNO1^ENSG00000139697.14 chr12:123315373:- KNTC1^ENSG00000184445.12 chr12:122547415:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:54643020:54653020 . NO_LDAS 0.1006 GT 1.6895 AG 1.9329 ["INTRACHROMOSOMAL[chr12:0.66Mb]"] chr12:123315373-chr12:122547415 False 0 Read count too low: 1 < 8 FAIL 1
SAPCD1--BRD2 1 0 1.0 0.0 ONLY_REF_SPLICE SAPCD1^ENSG00000228727.9 chr6:31764355:+ BRD2^ENSG00000204256.14 chr6:32977442:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:14231510:14241510 . YES_LDAS 0.1006 GT 1.9656 AG 1.7056 ["INTRACHROMOSOMAL[chr6:1.20Mb]"] chr6:31764355-chr6:32977442 False 0 Read count too low: 1 < 8 FAIL 1
SAMD5--SASH1 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:87036430:87046430 . YES_LDAS 0.1006 GT 1.8295 AG 1.9219 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"] chr6:147509387-chr6:148390134 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
SAMD5--AL033504.1 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147733729:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:66400840:66410840 . YES_LDAS 0.1006 GT 1.8295 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] chr6:147509387-chr6:147733729 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
SAMD12--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD12^ENSG00000177570.15 chr8:118580715:- RABGAP1L^ENSG00000152061.23 chr1:174219125:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:16107730:16117730 . YES_LDAS 0.1006 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr8--chr1]"] chr8:118580715-chr1:174219125 False 0 Read count too low: 1 < 8 FAIL 1
RSF1--XPO1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RSF1^ENSG00000048649.13 chr11:77698487:- XPO1^ENSG00000082898.19 chr2:61525513:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:86586980:86596980 . NO_LDAS 0.1006 GT 1.9086 AG 1.1589 ["INTERCHROMOSOMAL[chr11--chr2]"] chr11:77698487-chr2:61525513 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RRP15--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE RRP15^ENSG00000067533.6 chr1:218307632:+ RABGAP1L^ENSG00000152061.23 chr1:174699525:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:38490530:38500530 . YES_LDAS 0.1006 GT 1.3996 AG 1.7465 ["INTRACHROMOSOMAL[chr1:43.29Mb]"] chr1:218307632-chr1:174699525 False 0 Read count too low: 1 < 8 FAIL 1
RPS6KA6--ABCB7 1 0 1.0 0.0 ONLY_REF_SPLICE RPS6KA6^ENSG00000072133.11 chrX:84096194:- ABCB7^ENSG00000131269.19 chrX:75076654:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:33916970:33926970 . YES_LDAS 0.1006 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chrX:8.90Mb]"] chrX:84096194-chrX:75076654 False 0 Read count too low: 1 < 8 FAIL 1
RPS3AP11--SEPTIN7 1 0 0.33 0.0 INCL_NON_REF_SPLICE RPS3AP11^ENSG00000230116.1 chr1:42491744:+ SEPTIN7^ENSG00000122545.20 chr7:35832798:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:43049870:43059870 . NO_LDAS 0.0332 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr7]"] chr1:42491744-chr7:35832798 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
RPS2P4--CENPM 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS2P4^ENSG00000196183.5 chr14:104836848:- CENPM^ENSG00000100162.15 chr22:41946496:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54890390:54900390 . NO_LDAS 0.1006 GT 0.0 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr22]"] chr14:104836848-chr22:41946496 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS29--POLE2 1 0 1.0 0.0 ONLY_REF_SPLICE RPS29^ENSG00000213741.11 chr14:49585950:- POLE2^ENSG00000100479.13 chr14:49674427:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:27872340:27882340 . NO_LDAS 0.1006 GT 1.8892 AG 1.9656 ["Klijn_CellLines","DEEPEST2019","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr14:0.04Mb]","LOCAL_REARRANGEMENT:-:[44391]"] chr14:49585950-chr14:49674427 True read_through|ribosomal genes|RPS29 0 Blacklisted FAIL 1
RPS23P3--RPS23 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPS23P3^ENSG00000244099.1 chr4:66431470:+ RPS23^ENSG00000186468.13 chr5:82277772:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:47386840:47396840 . YES_LDAS 0.0503 GT 1.9219 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr5]"] chr4:66431470-chr5:82277772 False 0 Read count too low: 1 < 8 FAIL 1
RPS12--HUWE1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS12^ENSG00000112306.8 chr6:132815088:+ HUWE1^ENSG00000086758.16 chrX:53562843:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:4693220:4703220 . NO_LDAS 0.1006 GT 1.7968 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chrX]"] chr6:132815088-chrX:53562843 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS12--HBE1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS12^ENSG00000112306.8 chr6:132817055:+ HBE1^ENSG00000213931.7 chr11:5269588:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:52462280:52472280 . NO_LDAS 0.1006 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr11]"] chr6:132817055-chr11:5269588 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPRD2--RBBP4 1 0 0.33 0.0 ONLY_REF_SPLICE RPRD2^ENSG00000163125.15 chr1:150446401:+ RBBP4^ENSG00000162521.19 chr1:32668225:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:37206730:37216730 . YES_LDAS 0.0332 GT 1.8256 AG 1.5058 ["INTRACHROMOSOMAL[chr1:117.68Mb]"] chr1:150446401-chr1:32668225 False 0 Read count too low: 1 < 8 FAIL 1
RPL7A--GIPR 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL7A^ENSG00000148303.17 chr9:133351071:+ GIPR^ENSG00000010310.9 chr19:45681741:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:34566750:34576750 . NO_LDAS 0.1006 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr19]"] chr9:133351071-chr19:45681741 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL5--RBM17 1 0 1.0 0.0 ONLY_REF_SPLICE RPL5^ENSG00000122406.14 chr1:92833660:+ RBM17^ENSG00000134453.16 chr10:6114049:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:95486010:95496010 . YES_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr10]"] chr1:92833660-chr10:6114049 False 0 Read count too low: 1 < 8 FAIL 1
RPL3--IGL-@-ext 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL3^ENSG00000100316.16 chr22:39314686:- IGL-@-ext^IGL-.g@-ext chr22:22740638:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:43292970:43302970 . NO_LDAS 0.1006 GT 1.6402 AG 1.7819 ["INTRACHROMOSOMAL[chr22:16.39Mb]"] chr22:39314686-chr22:22740638 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL27A--PATJ 1 0 1.0 0.0 ONLY_REF_SPLICE RPL27A^ENSG00000166441.13 chr11:8684892:+ PATJ^ENSG00000132849.21 chr1:61827422:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:13434310:13444310 . YES_LDAS 0.1006 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr1]"] chr11:8684892-chr1:61827422 False 0 Read count too low: 1 < 8 FAIL 1
RPL22--UBR5 1 0 1.0 0.0 ONLY_REF_SPLICE RPL22^ENSG00000116251.11 chr1:6192930:- UBR5^ENSG00000104517.13 chr8:102312485:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:10433240:10443240 . YES_LDAS 0.1006 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr8]"] chr1:6192930-chr8:102312485 False 0 Read count too low: 1 < 8 FAIL 1
RPL22--UBAP2L 1 0 1.0 0.0 ONLY_REF_SPLICE RPL22^ENSG00000116251.11 chr1:6192930:- UBAP2L^ENSG00000143569.19 chr1:154225084:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:25368640:25378640 . YES_LDAS 0.1006 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr1:148.01Mb]"] chr1:6192930-chr1:154225084 False 0 Read count too low: 1 < 8 FAIL 1
RPL18A--LINC01304 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL18A^ENSG00000105640.13 chr19:17863313:+ LINC01304^ENSG00000237401.8 chr2:3959556:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:32893990:32903990 . YES_LDAS 0.1006 GT 1.7465 AG 0.7219 ["INTERCHROMOSOMAL[chr19--chr2]"] chr19:17863313-chr2:3959556 False 0 Read count too low: 1 < 8 FAIL 1
RPL12--RPL12P43 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127450795:- RPL12P43^ENSG00000234524.1 chrX:118146234:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:61668820:61678820 . NO_LDAS 0.0503 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chrX]"] chr9:127450795-chrX:118146234 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL12--RPL12P34 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127450795:- RPL12P34^ENSG00000229824.1 chr13:68654742:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:61668820:61678820 . NO_LDAS 0.0503 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr13]"] chr9:127450795-chr13:68654742 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL12--CSRP1 1 0 1.0 0.0 ONLY_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127449281:- CSRP1^ENSG00000159176.14 chr1:201490344:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:24430700:24440700 . YES_LDAS 0.1006 GT 1.1033 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr1]"] chr9:127449281-chr1:201490344 False 0 Read count too low: 1 < 8 FAIL 1
RPGR--PA2G4 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPGR^ENSG00000156313.15 chrX:38326841:- PA2G4^ENSG00000170515.14 chr12:56106612:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:6788680:6798680 . YES_LDAS 0.0503 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr12]"] chrX:38326841-chr12:56106612 False 0 Read count too low: 1 < 8 FAIL 1
ROS1--AJ006995.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ROS1^ENSG00000047936.11 chr6:117319868:- AJ006995.1^ENSG00000234083.1 chr21:27985104:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:16730680:16740680 . NO_LDAS 0.1006 GT 1.6895 AG 1.5656 ["INTERCHROMOSOMAL[chr6--chr21]"] chr6:117319868-chr21:27985104 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RNVU1-27--MARCHF8 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ MARCHF8^ENSG00000165406.16 chr10:45461411:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:6747730:6757730 . YES_LDAS 0.1006 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr10]"] chr1:148522796-chr10:45461411 False 0 Read count too low: 1 < 8 FAIL 1
RNF213--RPS16 1 0 1.0 0.0 ONLY_REF_SPLICE RNF213^ENSG00000173821.19 chr17:80273404:+ RPS16^ENSG00000105193.9 chr19:39435708:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:18135270:18145270 . YES_LDAS 0.1006 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:80273404-chr19:39435708 False 0 Read count too low: 1 < 8 FAIL 1
RNF121--FCHSD2 1 0 1.0 0.0 ONLY_REF_SPLICE RNF121^ENSG00000137522.18 chr11:71960891:+ FCHSD2^ENSG00000137478.15 chr11:72921950:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:52057170:52067170 . YES_LDAS 0.1006 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr11:0.84Mb]"] chr11:71960891-chr11:72921950 False 0 Read count too low: 1 < 8 FAIL 1
RIOK2--ZFP41 1 0 1.0 0.0 INCL_NON_REF_SPLICE RIOK2^ENSG00000058729.11 chr5:97167467:- ZFP41^ENSG00000181638.20 chr8:143259888:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:58792770:58802770 . NO_LDAS 0.1006 GT 1.9656 AG 1.231 ["INTERCHROMOSOMAL[chr5--chr8]"] chr5:97167467-chr8:143259888 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RFX3--C9orf129 1 0 0.5 0.0 ONLY_REF_SPLICE RFX3^ENSG00000080298.15 chr9:3525747:- C9orf129^ENSG00000204352.4 chr9:93335976:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:10494070:10504070 . YES_LDAS 0.0503 GT 1.8323 AG 1.7465 ["INTRACHROMOSOMAL[chr9:89.79Mb]"] chr9:3525747-chr9:93335976 False 0 Read count too low: 1 < 8 FAIL 1
RFTN1--SETSIP 1 0 1.0 0.0 INCL_NON_REF_SPLICE RFTN1^ENSG00000131378.14 chr3:16493725:- SETSIP^ENSG00000230667.6 chr1:92075299:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:28298060:28308060 . YES_LDAS 0.1006 GT 1.9329 AG 1.2419 ["INTERCHROMOSOMAL[chr3--chr1]"] chr3:16493725-chr1:92075299 False 0 Read count too low: 1 < 8 FAIL 1
REPIN1--EEF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE REPIN1^ENSG00000214022.11 chr7:150372044:+ EEF2^ENSG00000167658.16 chr19:3976631:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:31979980:31989980 . YES_LDAS 0.1006 GT 1.6729 AG 1.7232 ["INTERCHROMOSOMAL[chr7--chr19]"] chr7:150372044-chr19:3976631 False 0 Read count too low: 1 < 8 FAIL 1
REEP5--HUWE1 1 0 1.0 0.0 INCL_NON_REF_SPLICE REEP5^ENSG00000129625.13 chr5:112878731:- HUWE1^ENSG00000086758.16 chrX:53569664:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:17182510:17192510 . YES_LDAS 0.1006 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr5--chrX]"] chr5:112878731-chrX:53569664 False 0 Read count too low: 1 < 8 FAIL 1
RCL1--AC105052.5 1 0 0.5 0.0 INCL_NON_REF_SPLICE RCL1^ENSG00000120158.12 chr9:4793227:+ AC105052.5^ENSG00000286830.1 chr7:102703481:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:96583110:96593110 . NO_LDAS 0.0503 GT 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr7]"] chr9:4793227-chr7:102703481 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RCC1--NCK2 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ NCK2^ENSG00000071051.14 chr2:105892982:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:94165040:94175040 . YES_LDAS 0.1006 GT 1.7968 AG 1.7232 ["INTERCHROMOSOMAL[chr1--chr2]"] chr1:28508160-chr2:105892982 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--GMEB1 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ GMEB1^ENSG00000162419.13 chr1:28683583:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:88587260:88597260 . YES_LDAS 0.1006 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.13Mb]"] chr1:28508160-chr1:28683583 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--EIF3M 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ EIF3M^ENSG00000149100.13 chr11:32600689:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:25627150:25637150 . YES_LDAS 0.1006 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr11]"] chr1:28508160-chr11:32600689 False 0 Read count too low: 1 < 8 FAIL 1
RBM47--SMC6 1 0 1.0 0.0 ONLY_REF_SPLICE RBM47^ENSG00000163694.15 chr4:40630463:- SMC6^ENSG00000163029.16 chr2:17745951:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:91610590:91620590 . YES_LDAS 0.1006 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr2]"] chr4:40630463-chr2:17745951 False 0 Read count too low: 1 < 8 FAIL 1
RBM33--CREB3L2 1 0 1.0 0.0 ONLY_REF_SPLICE RBM33^ENSG00000184863.11 chr7:155766655:+ CREB3L2^ENSG00000182158.15 chr7:137916012:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:63720320:63730320 . NO_LDAS 0.1006 GT 1.9656 AG 1.5058 ["INTRACHROMOSOMAL[chr7:17.64Mb]"] chr7:155766655-chr7:137916012 False 0 Read count too low: 1 < 8 FAIL 1
RBM14--RBM4B 1 0 1.0 0.0 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ RBM4B^ENSG00000173914.12 chr11:66677091:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:85501620:85511620 . YES_LDAS 0.1006 GT 1.7465 AG 1.9086 ["Klijn_CellLines","HGNC_GENEFAM","INTRACHROMOSOMAL[chr11:0.04Mb]","LOCAL_INVERSION:+:-:[35064]"] chr11:66617057-chr11:66677091 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
RB1--FNDC3A 1 0 1.0 0.0 ONLY_REF_SPLICE RB1^ENSG00000139687.16 chr13:48307406:+ FNDC3A^ENSG00000102531.16 chr13:49145778:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:12216300:12226300 . YES_LDAS 0.1006 GT 1.5058 AG 1.8295 ["INTRACHROMOSOMAL[chr13:0.38Mb]"] chr13:48307406-chr13:49145778 False 0 Read count too low: 1 < 8 FAIL 1
RAPGEF1--AL353743.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE RAPGEF1^ENSG00000107263.18 chr9:131621796:- AL353743.1^ENSG00000165121.11 chr9:85815879:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:56271200:56281200 . YES_LDAS 0.0503 GT 1.8062 AG 1.9329 ["INTRACHROMOSOMAL[chr9:45.73Mb]"] chr9:131621796-chr9:85815879 False 0 Read count too low: 1 < 8 FAIL 1
RAP1B--MYOM2 1 0 1.0 0.0 ONLY_REF_SPLICE RAP1B^ENSG00000127314.18 chr12:68611052:+ MYOM2^ENSG00000036448.10 chr8:2129127:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:34780:44780 . YES_LDAS 0.1006 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr8]"] chr12:68611052-chr8:2129127 False 0 Read count too low: 1 < 8 FAIL 1
RALGPS2--AVEN 1 0 1.0 0.0 ONLY_REF_SPLICE RALGPS2^ENSG00000116191.17 chr1:178785607:+ AVEN^ENSG00000169857.9 chr15:34003209:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:78696130:78706130 . YES_LDAS 0.1006 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr15]"] chr1:178785607-chr15:34003209 False 0 Read count too low: 1 < 8 FAIL 1
RALGAPA1--ARID2 1 0 0.5 0.0 ONLY_REF_SPLICE RALGAPA1^ENSG00000174373.17 chr14:35605586:- ARID2^ENSG00000189079.17 chr12:45860801:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:51722630:51732630 . YES_LDAS 0.0503 GT 1.5329 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr12]"] chr14:35605586-chr12:45860801 False 0 Read count too low: 1 < 8 FAIL 1
R3HDM2--MRPL42 1 0 1.0 0.0 ONLY_REF_SPLICE R3HDM2^ENSG00000179912.20 chr12:57395749:- MRPL42^ENSG00000198015.14 chr12:93501176:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:3167440:3177440 . NO_LDAS 0.1006 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr12:36.04Mb]"] chr12:57395749-chr12:93501176 False 0 Read count too low: 1 < 8 FAIL 1
R3HDM1--R3HDM2 1 0 1.0 0.0 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135639122:+ R3HDM2^ENSG00000179912.20 chr12:57297387:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:70641660:70651660 . NO_LDAS 0.1006 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr12]"] chr2:135639122-chr12:57297387 False 0 Read count too low: 1 < 8 FAIL 1
PWP1--EDEM1 1 0 1.0 0.0 ONLY_REF_SPLICE PWP1^ENSG00000136045.12 chr12:107704747:+ EDEM1^ENSG00000134109.11 chr3:5213319:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:96903790:96913790 . YES_LDAS 0.1006 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr3]"] chr12:107704747-chr3:5213319 False 0 Read count too low: 1 < 8 FAIL 1
PTBP3--UGCG 1 0 1.0 0.0 ONLY_REF_SPLICE PTBP3^ENSG00000119314.16 chr9:112333470:- UGCG^ENSG00000148154.10 chr9:111914605:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:24752290:24762290 . YES_LDAS 0.1006 GT 1.8295 AG 1.7819 ["INTRACHROMOSOMAL[chr9:0.28Mb]"] chr9:112333470-chr9:111914605 False 0 Read count too low: 1 < 8 FAIL 1
PSPC1--ZMYM5 1 0 1.0 0.0 ONLY_REF_SPLICE PSPC1^ENSG00000121390.19 chr13:19759323:- ZMYM5^ENSG00000132950.19 chr13:19835689:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:88247800:88257800 . NO_LDAS 0.1006 GT 1.4566 AG 1.9899 ["TumorFusionsNAR2018","ChimerSeq","CCLE_StarF2019","INTRACHROMOSOMAL[chr13:0.04Mb]","LOCAL_REARRANGEMENT:-:[40463]"] chr13:19759323-chr13:19835689 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
PSMD10--NPM1P2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSMD10^ENSG00000101843.19 chrX:108088776:- NPM1P2^ENSG00000266227.1 chr18:26205599:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:44653470:44663470 . NO_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr18]"] chrX:108088776-chr18:26205599 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSMB9--SENP1 1 0 1.0 0.0 ONLY_REF_SPLICE PSMB9^ENSG00000240065.8 chr6:32858505:+ SENP1^ENSG00000079387.14 chr12:48098124:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:84613230:84623230 . YES_LDAS 0.1006 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr12]"] chr6:32858505-chr12:48098124 False 0 Read count too low: 1 < 8 FAIL 1
PSMA7--DNAAF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSMA7^ENSG00000101182.15 chr20:62140909:- DNAAF1^ENSG00000154099.18 chr16:84145486:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:75996860:76006860 . NO_LDAS 0.1006 GT 1.4716 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr16]"] chr20:62140909-chr16:84145486 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSD4--MTA1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PSD4^ENSG00000125637.16 chr2:113186259:+ MTA1^ENSG00000182979.18 chr14:105465708:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:29830610:29840610 . NO_LDAS 0.1006 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr14]"] chr2:113186259-chr14:105465708 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRUNE1--SMAD2 1 0 1.0 0.0 ONLY_REF_SPLICE PRUNE1^ENSG00000143363.17 chr1:151008671:+ SMAD2^ENSG00000175387.16 chr18:47896809:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:14631500:14641500 . NO_LDAS 0.1006 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr18]"] chr1:151008671-chr18:47896809 False 0 Read count too low: 1 < 8 FAIL 1
PRRC2C--LINC00384 1 0 1.0 0.0 INCL_NON_REF_SPLICE PRRC2C^ENSG00000117523.16 chr1:171566634:+ LINC00384^ENSG00000232117.2 chr13:30153494:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:71138820:71148820 . NO_LDAS 0.1006 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr13]"] chr1:171566634-chr13:30153494 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PRKDC--PSMB1 1 0 1.0 0.0 ONLY_REF_SPLICE PRKDC^ENSG00000253729.8 chr8:47849154:- PSMB1^ENSG00000008018.9 chr6:170549113:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54218060:54228060 . YES_LDAS 0.1006 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr6]"] chr8:47849154-chr6:170549113 False 0 Read count too low: 1 < 8 FAIL 1
PPCDC--CSK 1 0 1.0 0.0 ONLY_REF_SPLICE PPCDC^ENSG00000138621.12 chr15:75028453:+ CSK^ENSG00000103653.16 chr15:74798233:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:14028750:14038750 . YES_LDAS 0.1006 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr15:0.22Mb]"] chr15:75028453-chr15:74798233 False 0 Read count too low: 1 < 8 FAIL 1
POLI--TAF4 1 0 1.0 0.0 ONLY_REF_SPLICE POLI^ENSG00000101751.11 chr18:54287411:+ TAF4^ENSG00000130699.18 chr20:62014707:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:41661350:41671350 . YES_LDAS 0.1006 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr20]"] chr18:54287411-chr20:62014707 False 0 Read count too low: 1 < 8 FAIL 1
POLE4--RHOA 1 0 1.0 0.0 ONLY_REF_SPLICE POLE4^ENSG00000115350.12 chr2:74960146:+ RHOA^ENSG00000067560.14 chr3:49375591:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:89198330:89208330 . YES_LDAS 0.1006 GT 1.7968 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr3]"] chr2:74960146-chr3:49375591 False 0 Read count too low: 1 < 8 FAIL 1
PMFBP1--AC009075.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PMFBP1^ENSG00000118557.16 chr16:72154211:- AC009075.1^ENSG00000261673.1 chr16:72225200:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:47030430:47040430 . YES_LDAS 0.1006 GT 1.6895 AG 1.8062 ["INTRACHROMOSOMAL[chr16:0.05Mb]","LOCAL_REARRANGEMENT:-:[47687]"] chr16:72154211-chr16:72225200 False 0 Read count too low: 1 < 8 FAIL 1
PKN3--SLC25A25 1 0 1.0 0.0 ONLY_REF_SPLICE PKN3^ENSG00000160447.7 chr9:128707405:+ SLC25A25^ENSG00000148339.12 chr9:128105729:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:46765910:46775910 . YES_LDAS 0.1006 GT 1.6402 AG 1.6729 ["INTRACHROMOSOMAL[chr9:0.59Mb]"] chr9:128707405-chr9:128105729 False 0 Read count too low: 1 < 8 FAIL 1
PKD1P2--RBCK1 1 0 0.33 0.0 ONLY_REF_SPLICE PKD1P2^ENSG00000227827.3 chr16:16375273:+ RBCK1^ENSG00000125826.21 chr20:417220:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:20031850:20041850 . NO_LDAS 0.0332 GT 1.9329 AG 1.2729 ["INTERCHROMOSOMAL[chr16--chr20]"] chr16:16375273-chr20:417220 False 0 Read count too low: 1 < 8 FAIL 1
PIGL--NCOR1 1 0 1.0 0.0 INCL_NON_REF_SPLICE PIGL^ENSG00000108474.17 chr17:16219143:+ NCOR1^ENSG00000141027.21 chr17:16108912:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:70865990:70875990 . YES_LDAS 0.1006 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr17:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[994]"] chr17:16219143-chr17:16108912 False 0 Read count too low: 1 < 8 FAIL 1
PIF1--SLC2A1 1 0 1.0 0.0 ONLY_REF_SPLICE PIF1^ENSG00000140451.13 chr15:64820982:- SLC2A1^ENSG00000117394.24 chr1:42931206:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:49384310:49394310 . NO_LDAS 0.1006 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr1]"] chr15:64820982-chr1:42931206 False 0 Read count too low: 1 < 8 FAIL 1
PIAS2--RPRD1A 1 0 1.0 0.0 ONLY_REF_SPLICE PIAS2^ENSG00000078043.16 chr18:46827959:- RPRD1A^ENSG00000141425.18 chr18:35993300:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:91114900:91124900 . YES_LDAS 0.1006 GT 1.5219 AG 1.7819 ["INTRACHROMOSOMAL[chr18:10.74Mb]"] chr18:46827959-chr18:35993300 False 0 Read count too low: 1 < 8 FAIL 1
PI4K2B--MTCH2 1 0 1.0 0.0 ONLY_REF_SPLICE PI4K2B^ENSG00000038210.14 chr4:25256674:+ MTCH2^ENSG00000109919.10 chr11:47627127:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:23111700:23121700 . YES_LDAS 0.1006 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr11]"] chr4:25256674-chr11:47627127 False 0 Read count too low: 1 < 8 FAIL 1
PHKB--PLCG2 1 0 1.0 0.0 ONLY_REF_SPLICE PHKB^ENSG00000102893.16 chr16:47461426:+ PLCG2^ENSG00000197943.10 chr16:81905403:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:58961810:58971810 . NO_LDAS 0.1006 GT 1.8256 AG 1.9086 ["INTRACHROMOSOMAL[chr16:34.04Mb]"] chr16:47461426-chr16:81905403 False 0 Read count too low: 1 < 8 FAIL 1
PGAM1--RRP12 1 0 1.0 0.0 ONLY_REF_SPLICE PGAM1^ENSG00000171314.9 chr10:97426446:+ RRP12^ENSG00000052749.14 chr10:97357196:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:56693190:56703190 . NO_LDAS 0.1006 GT 1.7465 AG 1.6895 ["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_INVERSION:+:-:[115]"] chr10:97426446-chr10:97357196 False 0 Read count too low: 1 < 8 FAIL 1
PFKL--CIRBP 1 0 1.0 0.0 ONLY_REF_SPLICE PFKL^ENSG00000141959.17 chr21:44325264:+ CIRBP^ENSG00000099622.14 chr19:1271329:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:29918730:29928730 . YES_LDAS 0.1006 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr21--chr19]"] chr21:44325264-chr19:1271329 False 0 Read count too low: 1 < 8 FAIL 1
PEDS1--FKBP1C 1 0 1.0 0.0 INCL_NON_REF_SPLICE PEDS1^ENSG00000240849.11 chr20:50153517:- FKBP1C^ENSG00000198225.5 chr6:63211755:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:46863300:46873300 . YES_LDAS 0.1006 GT 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr20--chr6]"] chr20:50153517-chr6:63211755 False 0 Read count too low: 1 < 8 FAIL 1
PCM1--CD33 1 0 1.0 0.0 INCL_NON_REF_SPLICE PCM1^ENSG00000078674.18 chr8:17960165:+ CD33^ENSG00000105383.15 chr19:51238708:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:74282260:74292260 . NO_LDAS 0.1006 GT 1.4716 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr19]"] chr8:17960165-chr19:51238708 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PCGF1--ELMOD3 1 0 1.0 0.0 ONLY_REF_SPLICE PCGF1^ENSG00000115289.14 chr2:74506732:- ELMOD3^ENSG00000115459.18 chr2:85356967:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:31523330:31533330 . YES_LDAS 0.1006 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr2:10.85Mb]"] chr2:74506732-chr2:85356967 False 0 Read count too low: 1 < 8 FAIL 1
PCED1B-AS1--ZNF431 1 0 1.0 0.0 INCL_NON_REF_SPLICE PCED1B-AS1^ENSG00000247774.7 chr12:47210640:- ZNF431^ENSG00000196705.8 chr19:21167568:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:51761700:51771700 . NO_LDAS 0.1006 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr19]"] chr12:47210640-chr19:21167568 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PCBP2--PCBP3 1 0 1.0 0.0 ONLY_REF_SPLICE PCBP2^ENSG00000197111.16 chr12:53454869:+ PCBP3^ENSG00000183570.17 chr21:45899599:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:20446200:20456200 . NO_LDAS 0.1006 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr21]"] chr12:53454869-chr21:45899599 False 0 Read count too low: 1 < 8 FAIL 1
PABPC1--AC022079.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PABPC1^ENSG00000070756.17 chr8:100709703:- AC022079.2^ENSG00000278733.1 chr12:28186149:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:71525360:71535360 . NO_LDAS 0.1006 GT 1.8892 AG 1.1033 ["INTERCHROMOSOMAL[chr8--chr12]"] chr8:100709703-chr12:28186149 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
P2RY8--PLCXD1 1 0 1.0 0.0 ONLY_REF_SPLICE P2RY8^ENSG00000182162.11 chrX:1536921:- PLCXD1^ENSG00000182378.15 chrX:284167:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:39644820:39654820 . YES_LDAS 0.1006 GT 1.9329 AG 1.9086 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chrX:1.16Mb]"] chrX:1536921-chrX:284167 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
OSBPL3--RBMS2 1 0 0.5 0.0 ONLY_REF_SPLICE OSBPL3^ENSG00000070882.13 chr7:24815059:- RBMS2^ENSG00000076067.13 chr12:56580278:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:97544210:97554210 . NO_LDAS 0.0503 GT 1.5219 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr12]"] chr7:24815059-chr12:56580278 False 0 Read count too low: 1 < 8 FAIL 1
OSBPL3--LINC01099 1 0 0.5 0.0 ONLY_REF_SPLICE OSBPL3^ENSG00000070882.13 chr7:24815059:- LINC01099^ENSG00000251504.1 chr4:177903948:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:97544210:97554210 . NO_LDAS 0.0503 GT 1.5219 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr4]"] chr7:24815059-chr4:177903948 False 0 Read count too low: 1 < 8 FAIL 1
NUP35--LIN54 1 0 1.0 0.0 ONLY_REF_SPLICE NUP35^ENSG00000163002.13 chr2:183130545:+ LIN54^ENSG00000189308.11 chr4:82931145:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:26232200:26242200 . YES_LDAS 0.1006 GT 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr4]"] chr2:183130545-chr4:82931145 False 0 Read count too low: 1 < 8 FAIL 1
NUP107--SLC22A15 1 0 0.5 0.0 INCL_NON_REF_SPLICE NUP107^ENSG00000111581.10 chr12:68727389:+ SLC22A15^ENSG00000163393.13 chr1:116067994:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:46556200:46566200 . NO_LDAS 0.0503 GT 1.7232 AG 1.5219 ["INTERCHROMOSOMAL[chr12--chr1]"] chr12:68727389-chr1:116067994 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUP107--ARIH1 1 0 0.5 0.0 INCL_NON_REF_SPLICE NUP107^ENSG00000111581.10 chr12:68727389:+ ARIH1^ENSG00000166233.15 chr15:72596142:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:46556200:46566200 . NO_LDAS 0.0503 GT 1.7232 AG 1.4295 ["INTERCHROMOSOMAL[chr12--chr15]"] chr12:68727389-chr15:72596142 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NSUN5--EIF5 1 0 1.0 0.0 ONLY_REF_SPLICE NSUN5^ENSG00000130305.17 chr7:73308431:- EIF5^ENSG00000100664.11 chr14:103340427:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:95379760:95389760 . YES_LDAS 0.1006 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr14]"] chr7:73308431-chr14:103340427 False 0 Read count too low: 1 < 8 FAIL 1
NSF--LRRC37A3 1 0 0.5 0.0 ONLY_REF_SPLICE NSF^ENSG00000073969.18 chr17:46704854:+ LRRC37A3^ENSG00000176809.10 chr17:64892600:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:4184600:4194600 . YES_LDAS 0.0503 GT 1.6729 AG 1.7232 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr17:18.10Mb]"] chr17:46704854-chr17:64892600 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
NRG2--DENND4C 1 0 1.0 0.0 ONLY_REF_SPLICE NRG2^ENSG00000158458.21 chr5:140042370:- DENND4C^ENSG00000137145.21 chr9:19276158:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:51981920:51991920 . YES_LDAS 0.1006 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr5--chr9]"] chr5:140042370-chr9:19276158 False 0 Read count too low: 1 < 8 FAIL 1
NRDE2--DDB2 1 0 1.0 0.0 INCL_NON_REF_SPLICE NRDE2^ENSG00000119720.18 chr14:90276518:- DDB2^ENSG00000134574.12 chr11:47238683:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:64828810:64838810 . YES_LDAS 0.1006 GC 1.9219 AG 1.1589 ["INTERCHROMOSOMAL[chr14--chr11]"] chr14:90276518-chr11:47238683 False 0 Read count too low: 1 < 8 FAIL 1
NR3C1--ARHGAP26 1 0 1.0 0.0 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143399656:- ARHGAP26^ENSG00000145819.18 chr5:143054439:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:56763570:56773570 . YES_LDAS 0.1006 GT 1.9086 AG 1.8892 ["Klijn_CellLines","INTRACHROMOSOMAL[chr5:0.05Mb]","LOCAL_INVERSION:-:+:[48920]"] chr5:143399656-chr5:143054439 False 0 Read count too low: 1 < 8 FAIL 1
NPIPB14P--PDXDC1 1 0 0.17 0.0 ONLY_REF_SPLICE NPIPB14P^ENSG00000226232.8 chr16:69996069:- PDXDC1^ENSG00000179889.19 chr16:15008779:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:77895640:77905640 . YES_LDAS 0.0171 GT 1.8323 AG 1.5058 ["INTRACHROMOSOMAL[chr16:54.84Mb]"] chr16:69996069-chr16:15008779 False 0 Read count too low: 1 < 8 FAIL 1
NPIPA8--RBCK1 1 0 0.33 0.0 ONLY_REF_SPLICE NPIPA8^ENSG00000214940.8 chr16:18336634:- RBCK1^ENSG00000125826.21 chr20:417220:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:20031850:20041850 . NO_LDAS 0.0332 GT 1.9329 AG 1.2729 ["INTERCHROMOSOMAL[chr16--chr20]"] chr16:18336634-chr20:417220 False 0 Read count too low: 1 < 8 FAIL 1
NPIPA2--PDXDC2P 1 0 0.17 0.0 ONLY_REF_SPLICE NPIPA2^ENSG00000254852.8 chr16:14748185:+ PDXDC2P^ENSG00000255185.6 chr16:70031968:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:77895640:77905640 . YES_LDAS 0.0171 GT 1.8323 AG 1.5058 ["INTRACHROMOSOMAL[chr16:55.25Mb]"] chr16:14748185-chr16:70031968 False 0 Read count too low: 1 < 8 FAIL 1
NPDC1--PTBP1 1 0 1.0 0.0 ONLY_REF_SPLICE NPDC1^ENSG00000107281.10 chr9:137045878:- PTBP1^ENSG00000011304.22 chr19:799413:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:37249390:37259390 . YES_LDAS 0.1006 GT 1.231 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr19]"] chr9:137045878-chr19:799413 False 0 Read count too low: 1 < 8 FAIL 1
NME2--NME1 1 0 1.0 0.0 ONLY_REF_SPLICE NME2^ENSG00000243678.12 chr17:51168343:+ NME1^ENSG00000239672.8 chr17:51161160:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:19600580:19610580 . YES_LDAS 0.1006 GT 1.8062 AG 1.5546 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr17:0.00Mb]","LOCAL_REARRANGEMENT:+:[3007]"] chr17:51168343-chr17:51161160 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
NLGN4Y--VPS13A 1 0 1.0 0.0 ONLY_REF_SPLICE NLGN4Y^ENSG00000165246.14 chrY:14723269:+ VPS13A^ENSG00000197969.14 chr9:77353409:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:95832090:95842090 . YES_LDAS 0.1006 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chrY--chr9]"] chrY:14723269-chr9:77353409 False 0 Read count too low: 1 < 8 FAIL 1
NIPAL2--VPS13B 1 0 1.0 0.0 ONLY_REF_SPLICE NIPAL2^ENSG00000104361.10 chr8:98294003:- VPS13B^ENSG00000132549.19 chr8:99384208:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:9018000:9028000 . YES_LDAS 0.1006 GT 1.8256 AG 1.6729 ["INTRACHROMOSOMAL[chr8:0.72Mb]"] chr8:98294003-chr8:99384208 False 0 Read count too low: 1 < 8 FAIL 1
NFKBIA--PHF14 1 0 1.0 0.0 ONLY_REF_SPLICE NFKBIA^ENSG00000100906.11 chr14:35404418:- PHF14^ENSG00000106443.17 chr7:11111350:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:7653800:7663800 . YES_LDAS 0.1006 GT 1.7465 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr7]"] chr14:35404418-chr7:11111350 False 0 Read count too low: 1 < 8 FAIL 1
NFKB1--SNX14 1 0 1.0 0.0 ONLY_REF_SPLICE NFKB1^ENSG00000109320.13 chr4:102567135:+ SNX14^ENSG00000135317.13 chr6:85547226:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:92281300:92291300 . YES_LDAS 0.1006 GT 1.7232 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr6]"] chr4:102567135-chr6:85547226 False 0 Read count too low: 1 < 8 FAIL 1
NFATC3--IST1 1 0 1.0 0.0 ONLY_REF_SPLICE NFATC3^ENSG00000072736.19 chr16:68183366:+ IST1^ENSG00000182149.21 chr16:71922474:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:70364870:70374870 . YES_LDAS 0.1006 GT 1.8256 AG 1.9219 ["INTRACHROMOSOMAL[chr16:3.62Mb]"] chr16:68183366-chr16:71922474 False 0 Read count too low: 1 < 8 FAIL 1
NETO2--PHKB 1 0 1.0 0.0 ONLY_REF_SPLICE NETO2^ENSG00000171208.10 chr16:47143579:- PHKB^ENSG00000102893.16 chr16:47641035:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:65508000:65518000 . NO_LDAS 0.1006 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr16:0.32Mb]"] chr16:47143579-chr16:47641035 False 0 Read count too low: 1 < 8 FAIL 1
NELFB--EEF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE NELFB^ENSG00000188986.9 chr9:137255396:+ EEF2^ENSG00000167658.16 chr19:3983291:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:51156460:51166460 . YES_LDAS 0.1006 GC 1.1589 AG 1.5628 ["INTERCHROMOSOMAL[chr9--chr19]"] chr9:137255396-chr19:3983291 False 0 Read count too low: 1 < 8 FAIL 1
NDUFA13--GPR132 1 0 1.0 0.0 INCL_NON_REF_SPLICE NDUFA13^ENSG00000186010.19 chr19:19528087:+ GPR132^ENSG00000183484.12 chr14:105051340:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:52054810:52064810 . NO_LDAS 0.1006 GC 1.585 AG 1.4295 ["INTERCHROMOSOMAL[chr19--chr14]"] chr19:19528087-chr14:105051340 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NDUFA11--ALKBH6 1 0 1.0 0.0 ONLY_REF_SPLICE NDUFA11^ENSG00000174886.14 chr19:5896453:- ALKBH6^ENSG00000239382.10 chr19:36009553:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:37735500:37745500 . YES_LDAS 0.1006 GT 1.9086 AG 1.2419 ["INTRACHROMOSOMAL[chr19:30.11Mb]"] chr19:5896453-chr19:36009553 False 0 Read count too low: 1 < 8 FAIL 1
N4BP2--ATP8A1 1 0 1.0 0.0 ONLY_REF_SPLICE N4BP2^ENSG00000078177.14 chr4:40113508:+ ATP8A1^ENSG00000124406.16 chr4:42507154:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:33898850:33908850 . NO_LDAS 0.1006 GT 1.7968 AG 1.8062 ["INTRACHROMOSOMAL[chr4:2.25Mb]"] chr4:40113508-chr4:42507154 False 0 Read count too low: 1 < 8 FAIL 1
MYLK-AS1--SEC24D 1 0 1.0 0.0 INCL_NON_REF_SPLICE MYLK-AS1^ENSG00000239523.6 chr3:123586210:+ SEC24D^ENSG00000150961.15 chr4:118764917:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:6111740:6121740 . NO_LDAS 0.1006 GT 1.2419 AG 1.5058 ["INTERCHROMOSOMAL[chr3--chr4]"] chr3:123586210-chr4:118764917 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MYCBP2-AS1--SLC7A6 1 0 1.0 0.0 ONLY_REF_SPLICE MYCBP2-AS1^ENSG00000236051.7 chr13:77092567:+ SLC7A6^ENSG00000103064.15 chr16:68294705:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:43464270:43474270 . NO_LDAS 0.1006 GT 1.9329 AG 1.4295 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr13--chr16]"] chr13:77092567-chr16:68294705 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
MTOR--IGH-@-ext 1 0 1.0 0.0 INCL_NON_REF_SPLICE MTOR^ENSG00000198793.13 chr1:11237848:- IGH-@-ext^IGH-.g@-ext chr14:105585563:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:65451290:65461290 . NO_LDAS 0.1006 TC 1.9899 CC 1.2419 ["INTERCHROMOSOMAL[chr1--chr14]"] chr1:11237848-chr14:105585563 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MRPS18A--PDC-AS1 1 0 0.5 0.0 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- PDC-AS1^ENSG00000229739.4 chr1:186459293:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:61476990:61486990 . YES_LDAS 0.0503 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] chr6:43687668-chr1:186459293 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
MRPS18A--AC061975.8 1 0 0.5 0.0 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- AC061975.8^ENSG00000287721.1 chr17:28223196:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:61476990:61486990 . YES_LDAS 0.0503 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr17]"] chr6:43687668-chr17:28223196 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MPST--RNASET2 1 0 1.0 0.0 INCL_NON_REF_SPLICE MPST^ENSG00000128309.17 chr22:37024810:+ RNASET2^ENSG00000026297.16 chr6:166922892:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:60225700:60235700 . NO_LDAS 0.1006 GT 1.5058 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr6]"] chr22:37024810-chr6:166922892 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MPP6--GSDME 1 0 1.0 0.0 ONLY_REF_SPLICE MPP6^ENSG00000105926.16 chr7:24680520:+ GSDME^ENSG00000105928.16 chr7:24699259:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:82950540:82960540 . NO_LDAS 0.1006 GT 1.8892 AG 1.5058 ["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_INVERSION:+:-:[4162]"] chr7:24680520-chr7:24699259 False 0 Read count too low: 1 < 8 FAIL 1
MON1A--LUC7L2 1 0 1.0 0.0 ONLY_REF_SPLICE MON1A^ENSG00000164077.14 chr3:49929609:- LUC7L2^ENSG00000146963.18 chr7:139422163:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:61986720:61996720 . YES_LDAS 0.1006 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr3--chr7]"] chr3:49929609-chr7:139422163 False 0 Read count too low: 1 < 8 FAIL 1
MLLT10--PATJ 1 0 1.0 0.0 ONLY_REF_SPLICE MLLT10^ENSG00000078403.17 chr10:21551921:+ PATJ^ENSG00000132849.21 chr1:61875243:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:98513740:98523740 . YES_LDAS 0.1006 GT 1.7232 AG 1.3996 ["INTERCHROMOSOMAL[chr10--chr1]"] chr10:21551921-chr1:61875243 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
MKRN2--RAF1 1 0 1.0 0.0 ONLY_REF_SPLICE MKRN2^ENSG00000075975.17 chr3:12557176:+ RAF1^ENSG00000132155.13 chr3:12618747:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:24923110:24933110 . YES_LDAS 0.1006 GT 1.9899 AG 1.4566 ["INTRACHROMOSOMAL[chr3:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[2607]"] chr3:12557176-chr3:12618747 False 0 Read count too low: 1 < 8 FAIL 1
MINDY3--SFMBT2 1 0 1.0 0.0 ONLY_REF_SPLICE MINDY3^ENSG00000148481.14 chr10:15860206:- SFMBT2^ENSG00000198879.12 chr10:7248649:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:38657730:38667730 . YES_LDAS 0.1006 GT 1.7819 AG 1.9899 ["INTRACHROMOSOMAL[chr10:8.37Mb]"] chr10:15860206-chr10:7248649 False 0 Read count too low: 1 < 8 FAIL 1
METTL1--MMP17 1 0 1.0 0.0 INCL_NON_REF_SPLICE METTL1^ENSG00000037897.17 chr12:57770942:- MMP17^ENSG00000198598.7 chr12:131838195:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:49817830:49827830 . YES_LDAS 0.1006 GT 1.8323 AG 1.7968 ["INTRACHROMOSOMAL[chr12:74.06Mb]"] chr12:57770942-chr12:131838195 False 0 Read count too low: 1 < 8 FAIL 1
MEIS2--DNA2 1 0 1.0 0.0 ONLY_REF_SPLICE MEIS2^ENSG00000134138.20 chr15:37036814:- DNA2^ENSG00000138346.15 chr10:68470163:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:82597810:82607810 . NO_LDAS 0.1006 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr10]"] chr15:37036814-chr10:68470163 False 0 Read count too low: 1 < 8 FAIL 1
MECR--R3HDM2 1 0 1.0 0.0 ONLY_REF_SPLICE MECR^ENSG00000116353.16 chr1:29221075:- R3HDM2^ENSG00000179912.20 chr12:57395818:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:30097000:30107000 . NO_LDAS 0.1006 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr12]"] chr1:29221075-chr12:57395818 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
MCOLN2--TUT4 1 0 1.0 0.0 ONLY_REF_SPLICE MCOLN2^ENSG00000153898.13 chr1:84996796:- TUT4^ENSG00000134744.14 chr1:52446667:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:11261200:11271200 . YES_LDAS 0.1006 GT 1.9899 AG 1.7819 ["INTRACHROMOSOMAL[chr1:32.37Mb]"] chr1:84996796-chr1:52446667 False 0 Read count too low: 1 < 8 FAIL 1
MAST1--MAN2B1 1 0 1.0 0.0 ONLY_REF_SPLICE MAST1^ENSG00000105613.10 chr19:12867977:+ MAN2B1^ENSG00000104774.13 chr19:12652460:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:68282920:68292920 . YES_LDAS 0.1006 GT 1.7819 AG 1.8062 ["INTRACHROMOSOMAL[chr19:0.17Mb]"] chr19:12867977-chr19:12652460 False 0 Read count too low: 1 < 8 FAIL 1
MARS1--DHX16 1 0 1.0 0.0 ONLY_REF_SPLICE MARS1^ENSG00000166986.15 chr12:57511868:+ DHX16^ENSG00000204560.10 chr6:30659834:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:86576720:86586720 . YES_LDAS 0.1006 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr6]"] chr12:57511868-chr6:30659834 False 0 Read count too low: 1 < 8 FAIL 1
MAP2K4--PTBP3 1 0 1.0 0.0 ONLY_REF_SPLICE MAP2K4^ENSG00000065559.15 chr17:12021001:+ PTBP3^ENSG00000119314.16 chr9:112297916:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:52408660:52418660 . NO_LDAS 0.1006 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr9]"] chr17:12021001-chr9:112297916 False 0 Read count too low: 1 < 8 FAIL 1
LYN--UTP6 1 0 1.0 0.0 ONLY_REF_SPLICE LYN^ENSG00000254087.8 chr8:55952115:+ UTP6^ENSG00000108651.10 chr17:31878781:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:21158020:21168020 . YES_LDAS 0.1006 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr17]"] chr8:55952115-chr17:31878781 False 0 Read count too low: 1 < 8 FAIL 1
LY75--NCOA3 1 0 1.0 0.0 INCL_NON_REF_SPLICE LY75^ENSG00000054219.11 chr2:159810582:- NCOA3^ENSG00000124151.19 chr20:47636583:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:76319670:76329670 . NO_LDAS 0.1006 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr20]"] chr2:159810582-chr20:47636583 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LUC7L2--BRWD1-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE LUC7L2^ENSG00000146963.18 chr7:139360322:+ BRWD1-AS1^ENSG00000238141.2 chr21:39317045:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:1480540:1490540 . NO_LDAS 0.1006 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr21]"] chr7:139360322-chr21:39317045 False 0 Read count too low: 1 < 8 FAIL 1
LTO1--RNPEP 1 0 1.0 0.0 ONLY_REF_SPLICE LTO1^ENSG00000149716.13 chr11:69667479:- RNPEP^ENSG00000176393.11 chr1:202001376:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:42548820:42558820 . YES_LDAS 0.1006 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr1]"] chr11:69667479-chr1:202001376 False 0 Read count too low: 1 < 8 FAIL 1
LRRC8A--NUP98 1 0 1.0 0.0 ONLY_REF_SPLICE LRRC8A^ENSG00000136802.12 chr9:128882250:+ NUP98^ENSG00000110713.17 chr11:3686194:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:75225190:75235190 . NO_LDAS 0.1006 GT 1.4295 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr11]"] chr9:128882250-chr11:3686194 False 0 Read count too low: 1 < 8 FAIL 1
LPCAT1--HOXA4 1 0 1.0 0.0 INCL_NON_REF_SPLICE LPCAT1^ENSG00000153395.10 chr5:1501461:- HOXA4^ENSG00000197576.14 chr7:27130388:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:64663350:64673350 . NO_LDAS 0.1006 GT 1.8295 AG 1.3383 ["INTERCHROMOSOMAL[chr5--chr7]"] chr5:1501461-chr7:27130388 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LNCTAM34A--TMC8 1 0 1.0 0.0 INCL_NON_REF_SPLICE LNCTAM34A^ENSG00000234546.4 chr1:9183987:+ TMC8^ENSG00000167895.15 chr17:78140834:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:99969820:99979820 . YES_LDAS 0.1006 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr17]"] chr1:9183987-chr17:78140834 False 0 Read count too low: 1 < 8 FAIL 1
LIPE--MCM7 1 0 1.0 0.0 ONLY_REF_SPLICE LIPE^ENSG00000079435.10 chr19:42405385:- MCM7^ENSG00000166508.18 chr7:100096167:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:62172880:62182880 . YES_LDAS 0.1006 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr7]"] chr19:42405385-chr7:100096167 False 0 Read count too low: 1 < 8 FAIL 1
LINC02728--GAB2 1 0 1.0 0.0 ONLY_REF_SPLICE LINC02728^ENSG00000251323.3 chr11:78425337:- GAB2^ENSG00000033327.13 chr11:78280901:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:86186260:86196260 . NO_LDAS 0.1006 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[5634]"] chr11:78425337-chr11:78280901 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LINC01531--NSD1 1 0 1.0 0.0 ONLY_REF_SPLICE LINC01531^ENSG00000205786.8 chr19:35411282:+ NSD1^ENSG00000165671.21 chr5:177204120:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:71110170:71120170 . NO_LDAS 0.1006 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr5]"] chr19:35411282-chr5:177204120 False 0 Read count too low: 1 < 8 FAIL 1
LINC00893--IDS 1 0 1.0 0.0 ONLY_REF_SPLICE LINC00893^ENSG00000241769.7 chrX:149529367:- IDS^ENSG00000010404.18 chrX:149501037:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:46696730:46706730 . YES_LDAS 0.1006 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chrX:0.01Mb]","NEIGHBORS[6495]"] chrX:149529367-chrX:149501037 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LILRB1--LILRA5 1 0 1.0 0.0 ONLY_REF_SPLICE LILRB1^ENSG00000104972.15 chr19:54631107:+ LILRA5^ENSG00000187116.14 chr19:54312370:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:18462270:18472270 . YES_LDAS 0.1006 GT 1.7819 AG 1.7465 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.30Mb]"] chr19:54631107-chr19:54312370 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
LAT2--CLIP2 1 0 1.0 0.0 ONLY_REF_SPLICE LAT2^ENSG00000086730.17 chr7:74210088:+ CLIP2^ENSG00000106665.16 chr7:74375887:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:29689390:29699390 . YES_LDAS 0.1006 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[59573]"] chr7:74210088-chr7:74375887 False 0 Read count too low: 1 < 8 FAIL 1
LARGE1--PSMB2 1 0 1.0 0.0 ONLY_REF_SPLICE LARGE1^ENSG00000133424.22 chr22:33564848:- PSMB2^ENSG00000126067.12 chr1:35609408:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:29812840:29822840 . NO_LDAS 0.1006 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr1]"] chr22:33564848-chr1:35609408 False 0 Read count too low: 1 < 8 FAIL 1
LAMC1--ZC3H14 1 0 1.0 0.0 ONLY_REF_SPLICE LAMC1^ENSG00000135862.6 chr1:183103632:+ ZC3H14^ENSG00000100722.20 chr14:88574693:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:4647010:4657010 . YES_LDAS 0.1006 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr14]"] chr1:183103632-chr14:88574693 False 0 Read count too low: 1 < 8 FAIL 1
KPNA3--BRAF 1 0 1.0 0.0 ONLY_REF_SPLICE KPNA3^ENSG00000102753.10 chr13:49792438:- BRAF^ENSG00000157764.14 chr7:140850212:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:71196250:71206250 . YES_LDAS 0.1006 GT 1.8295 AG 1.8062 ["INTERCHROMOSOMAL[chr13--chr7]"] chr13:49792438-chr7:140850212 False 0 Read count too low: 1 < 8 FAIL 1
KPNA2--AC092121.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE KPNA2^ENSG00000182481.10 chr17:68045921:+ AC092121.1^ENSG00000261144.1 chr16:59167037:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:88754600:88764600 . YES_LDAS 0.1006 GT 1.8295 AG 1.5329 ["INTERCHROMOSOMAL[chr17--chr16]"] chr17:68045921-chr16:59167037 False 0 Read count too low: 1 < 8 FAIL 1
KMT2E--NDUFB2 1 0 1.0 0.0 ONLY_REF_SPLICE KMT2E^ENSG00000005483.21 chr7:105014535:+ NDUFB2^ENSG00000090266.13 chr7:140702866:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:71410890:71420890 . YES_LDAS 0.1006 GT 1.9656 AG 1.3996 ["INTRACHROMOSOMAL[chr7:35.58Mb]"] chr7:105014535-chr7:140702866 False 0 Read count too low: 1 < 8 FAIL 1
KLHL18--LINC02149 1 0 1.0 0.0 INCL_NON_REF_SPLICE KLHL18^ENSG00000114648.12 chr3:47283094:+ LINC02149^ENSG00000249332.2 chr5:15192378:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:16750720:16760720 . NO_LDAS 0.1006 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr5]"] chr3:47283094-chr5:15192378 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KLHDC4--PRPF4B 1 0 1.0 0.0 ONLY_REF_SPLICE KLHDC4^ENSG00000104731.14 chr16:87748673:- PRPF4B^ENSG00000112739.17 chr6:4031559:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:13293460:13303460 . YES_LDAS 0.1006 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr6]"] chr16:87748673-chr6:4031559 False 0 Read count too low: 1 < 8 FAIL 1
KLF12--UGGT2 1 0 1.0 0.0 ONLY_REF_SPLICE KLF12^ENSG00000118922.17 chr13:73943981:- UGGT2^ENSG00000102595.20 chr13:95999307:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:66480130:66490130 . YES_LDAS 0.1006 GT 1.8323 AG 1.7819 ["INTRACHROMOSOMAL[chr13:21.81Mb]"] chr13:73943981-chr13:95999307 False 0 Read count too low: 1 < 8 FAIL 1
KDM5D--MIR663AHG 1 0 1.0 0.0 INCL_NON_REF_SPLICE KDM5D^ENSG00000012817.16 chrY:19715352:- MIR663AHG^ENSG00000227195.11 chr20:26208395:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:99169420:99179420 . NO_LDAS 0.1006 GT 1.8295 AG 1.8323 ["INTERCHROMOSOMAL[chrY--chr20]"] chrY:19715352-chr20:26208395 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KDM2A--CBL 1 0 1.0 0.0 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67132073:+ CBL^ENSG00000110395.7 chr11:119232448:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:66698850:66708850 . NO_LDAS 0.1006 GT 1.9656 AG 1.2729 ["INTRACHROMOSOMAL[chr11:51.95Mb]"] chr11:67132073-chr11:119232448 False 0 Read count too low: 1 < 8 FAIL 1
KCTD13--BCL2L1 1 0 1.0 0.0 ONLY_REF_SPLICE KCTD13^ENSG00000174943.11 chr16:29923190:- BCL2L1^ENSG00000171552.14 chr20:31666086:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:97040640:97050640 . YES_LDAS 0.1006 GT 1.8323 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr20]"] chr16:29923190-chr20:31666086 False 0 Read count too low: 1 < 8 FAIL 1
KCND2--PMS1 1 0 1.0 0.0 ONLY_REF_SPLICE KCND2^ENSG00000184408.10 chr7:120275747:+ PMS1^ENSG00000064933.18 chr2:189791790:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:29826170:29836170 . YES_LDAS 0.1006 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr2]"] chr7:120275747-chr2:189791790 False 0 Read count too low: 1 < 8 FAIL 1
KANTR--EWSR1 1 0 1.0 0.0 ONLY_REF_SPLICE KANTR^ENSG00000232593.7 chrX:53094474:+ EWSR1^ENSG00000182944.18 chr22:29292137:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:6071300:6081300 . YES_LDAS 0.1006 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr22]"] chrX:53094474-chr22:29292137 False 0 Read count too low: 1 < 8 FAIL 1
JPT2--UBE2I 1 0 1.0 0.0 ONLY_REF_SPLICE JPT2^ENSG00000206053.13 chr16:1678356:+ UBE2I^ENSG00000103275.21 chr16:1314020:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:14924890:14934890 . NO_LDAS 0.1006 GT 1.5329 AG 1.9329 ["INTRACHROMOSOMAL[chr16:0.35Mb]"] chr16:1678356-chr16:1314020 False 0 Read count too low: 1 < 8 FAIL 1
JAK2--SMARCA2 1 0 1.0 0.0 ONLY_REF_SPLICE JAK2^ENSG00000096968.14 chr9:5090911:+ SMARCA2^ENSG00000080503.24 chr9:2028987:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:65431930:65441930 . YES_LDAS 0.1006 GT 1.9329 AG 1.8256 ["INTRACHROMOSOMAL[chr9:2.79Mb]"] chr9:5090911-chr9:2028987 False 0 Read count too low: 1 < 8 FAIL 1
ITPR2--WBP2NL 1 0 0.25 0.0 INCL_NON_REF_SPLICE ITPR2^ENSG00000123104.12 chr12:26578713:- WBP2NL^ENSG00000183066.14 chr22:42002950:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:5988940:5998940 . NO_LDAS 0.0252 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr22]"] chr12:26578713-chr22:42002950 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ITPKC--SGSM1 1 0 0.33 0.0 INCL_NON_REF_SPLICE ITPKC^ENSG00000086544.3 chr19:40729250:+ SGSM1^ENSG00000167037.19 chr22:24847772:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:33235140:33245140 . NO_LDAS 0.0332 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr22]"] chr19:40729250-chr22:24847772 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ISCA1--SETSIP 1 0 1.0 0.0 INCL_NON_REF_SPLICE ISCA1^ENSG00000135070.15 chr9:86272007:- SETSIP^ENSG00000230667.6 chr1:92075299:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:73310820:73320820 . YES_LDAS 0.1006 GT 1.7819 AG 1.2419 ["INTERCHROMOSOMAL[chr9--chr1]"] chr9:86272007-chr1:92075299 False 0 Read count too low: 1 < 8 FAIL 1
IRF4--WDR44 1 0 1.0 0.0 ONLY_REF_SPLICE IRF4^ENSG00000137265.15 chr6:401777:+ WDR44^ENSG00000131725.14 chrX:118432781:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:66544230:66554230 . YES_LDAS 0.1006 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chrX]"] chr6:401777-chrX:118432781 False 0 Read count too low: 1 < 8 FAIL 1
IRF4--PRKCD 1 0 1.0 0.0 INCL_NON_REF_SPLICE IRF4^ENSG00000137265.15 chr6:397243:+ PRKCD^ENSG00000163932.15 chr3:53183497:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:32207980:32217980 . NO_LDAS 0.1006 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr3]"] chr6:397243-chr3:53183497 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IQCH-AS1--SRGAP2 1 0 1.0 0.0 ONLY_REF_SPLICE IQCH-AS1^ENSG00000259673.6 chr15:67520192:- SRGAP2^ENSG00000266028.7 chr1:206303281:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:31524600:31534600 . NO_LDAS 0.1006 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr1]"] chr15:67520192-chr1:206303281 False 0 Read count too low: 1 < 8 FAIL 1
IPP--U2AF1 1 0 0.5 0.0 ONLY_REF_SPLICE IPP^ENSG00000197429.11 chr1:45746120:- U2AF1^ENSG00000160201.12 chr21:43095743:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:93916130:93926130 . YES_LDAS 0.0503 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr21]"] chr1:45746120-chr21:43095743 False 0 Read count too low: 1 < 8 FAIL 1
INTS13--IFI44L 1 0 1.0 0.0 ONLY_REF_SPLICE INTS13^ENSG00000064102.15 chr12:26934556:- IFI44L^ENSG00000137959.17 chr1:78627906:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:62042510:62052510 . YES_LDAS 0.1006 GT 1.8295 AG 1.6729 ["INTERCHROMOSOMAL[chr12--chr1]"] chr12:26934556-chr1:78627906 False 0 Read count too low: 1 < 8 FAIL 1
IKZF2--ABI2 1 0 1.0 0.0 ONLY_REF_SPLICE IKZF2^ENSG00000030419.16 chr2:213147708:- ABI2^ENSG00000138443.17 chr2:203402576:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:23307010:23317010 . YES_LDAS 0.1006 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr2:9.55Mb]"] chr2:213147708-chr2:203402576 False 0 Read count too low: 1 < 8 FAIL 1
IGL-@-ext--TRMT1L 1 0 0.5 0.0 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22532906:- TRMT1L^ENSG00000121486.12 chr1:185156699:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:17339120:17349120 . YES_LDAS 0.0503 TG 1.6895 GG 1.6729 ["INTERCHROMOSOMAL[chr22--chr1]"] chr22:22532906-chr1:185156699 False 0 Read count too low: 1 < 8 FAIL 1
IGH-@-ext--TPT1 1 0 0.17 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105769397:+ TPT1^ENSG00000133112.17 chr13:45341159:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19807820:19817820 . YES_LDAS 0.0171 GC 1.8892 CC 1.4716 ["INTERCHROMOSOMAL[chr14--chr13]"] chr14:105769397-chr13:45341159 False 0 Read count too low: 1 < 8 FAIL 1
IGH-@-ext--TPT1 1 0 0.17 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105741633:+ TPT1^ENSG00000133112.17 chr13:45341159:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19807820:19817820 . YES_LDAS 0.0171 GC 1.8062 CC 1.4716 ["INTERCHROMOSOMAL[chr14--chr13]"] chr14:105741633-chr13:45341159 False 0 Read count too low: 1 < 8 FAIL 1
IGH-@-ext--TPT1 1 0 0.17 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105643363:+ TPT1^ENSG00000133112.17 chr13:45341159:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19807820:19817820 . YES_LDAS 0.0171 GT 1.8892 CC 1.4716 ["INTERCHROMOSOMAL[chr14--chr13]"] chr14:105643363-chr13:45341159 False 0 Read count too low: 1 < 8 FAIL 1
IGH-@-ext--TAGLN2 1 0 0.33 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106760371:+ TAGLN2^ENSG00000158710.15 chr1:159920582:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:8884540:8894540 . NO_LDAS 0.0332 TC 1.9219 CA 1.7968 ["INTERCHROMOSOMAL[chr14--chr1]"] chr14:106760371-chr1:159920582 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IGH-@-ext--TAGLN2 1 0 0.33 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106712967:+ TAGLN2^ENSG00000158710.15 chr1:159920582:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:8884540:8894540 . NO_LDAS 0.0332 TC 1.9219 CA 1.7968 ["INTERCHROMOSOMAL[chr14--chr1]"] chr14:106712967-chr1:159920582 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IGH-@-ext--TAGLN2 1 0 0.33 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106508741:+ TAGLN2^ENSG00000158710.15 chr1:159920582:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:8884540:8894540 . NO_LDAS 0.0332 TC 1.9219 CA 1.7968 ["INTERCHROMOSOMAL[chr14--chr1]"] chr14:106508741-chr1:159920582 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IGH-@-ext--RPL39 1 0 0.17 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106675132:+ RPL39^ENSG00000198918.8 chrX:119786724:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19331430:19341430 . NO_LDAS 0.0171 AG 1.9329 CT 1.8295 ["INTERCHROMOSOMAL[chr14--chrX]"] chr14:106675132-chrX:119786724 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IGH-@-ext--RPL39 1 0 0.17 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106592793:+ RPL39^ENSG00000198918.8 chrX:119786724:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19331430:19341430 . NO_LDAS 0.0171 AG 1.9329 CT 1.8295 ["INTERCHROMOSOMAL[chr14--chrX]"] chr14:106592793-chrX:119786724 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IGH-@-ext--RPL39 1 0 0.17 0.0 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:106268723:+ RPL39^ENSG00000198918.8 chrX:119786724:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19331430:19341430 . NO_LDAS 0.0171 AG 1.9329 CT 1.8295 ["INTERCHROMOSOMAL[chr14--chrX]"] chr14:106268723-chrX:119786724 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IER2--TNK2 1 0 1.0 0.0 ONLY_REF_SPLICE IER2^ENSG00000160888.7 chr19:13150552:+ TNK2^ENSG00000061938.20 chr3:195872470:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:54428940:54438940 . YES_LDAS 0.1006 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr3]"] chr19:13150552-chr3:195872470 False 0 Read count too low: 1 < 8 FAIL 1
HSPE1--MTRNR2L7 1 0 1.0 0.0 INCL_NON_REF_SPLICE HSPE1^ENSG00000115541.11 chr2:197503056:+ MTRNR2L7^ENSG00000256892.2 chr10:37602884:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:40496530:40506530 . NO_LDAS 0.1006 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr2--chr10]"] chr2:197503056-chr10:37602884 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HSPA4--SEC24A 1 0 1.0 0.0 ONLY_REF_SPLICE HSPA4^ENSG00000170606.15 chr5:133089161:+ SEC24A^ENSG00000113615.13 chr5:134688181:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:24083340:24093340 . YES_LDAS 0.1006 GT 1.7056 AG 1.9219 ["INTRACHROMOSOMAL[chr5:1.54Mb]"] chr5:133089161-chr5:134688181 False 0 Read count too low: 1 < 8 FAIL 1
HNRNPU--SSH1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNRNPU^ENSG00000153187.20 chr1:244863674:- SSH1^ENSG00000084112.15 chr12:108787836:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:86077710:86087710 . NO_LDAS 0.1006 GT 1.4566 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr12]"] chr1:244863674-chr12:108787836 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HNF1B--SIPA1L1 1 0 1.0 0.0 ONLY_REF_SPLICE HNF1B^ENSG00000275410.5 chr17:37744541:- SIPA1L1^ENSG00000197555.9 chr14:71413948:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:34388070:34398070 . NO_LDAS 0.1006 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr14]"] chr17:37744541-chr14:71413948 False 0 Read count too low: 1 < 8 FAIL 1
HNF1B--EIF4A3 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNF1B^ENSG00000275410.5 chr17:37731595:- EIF4A3^ENSG00000141543.12 chr17:80134985:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:92204750:92214750 . YES_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr17:42.39Mb]"] chr17:37731595-chr17:80134985 False 0 Read count too low: 1 < 8 FAIL 1
HIVEP1--TIA1 1 0 1.0 0.0 ONLY_REF_SPLICE HIVEP1^ENSG00000095951.17 chr6:12015668:+ TIA1^ENSG00000116001.17 chr2:70229091:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:9666100:9676100 . YES_LDAS 0.1006 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr2]"] chr6:12015668-chr2:70229091 False 0 Read count too low: 1 < 8 FAIL 1
HIC2--PI4KA 1 0 1.0 0.0 ONLY_REF_SPLICE HIC2^ENSG00000169635.10 chr22:21442857:+ PI4KA^ENSG00000241973.11 chr22:20733843:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:8841670:8851670 . YES_LDAS 0.1006 GT 1.7465 AG 1.7819 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr22:0.56Mb]"] chr22:21442857-chr22:20733843 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
HCN3--PHKG2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HCN3^ENSG00000143630.10 chr1:155285311:+ PHKG2^ENSG00000156873.16 chr16:30756184:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:23161920:23171920 . NO_LDAS 0.1006 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr16]"] chr1:155285311-chr16:30756184 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HCCS--FASTKD1 1 0 1.0 0.0 ONLY_REF_SPLICE HCCS^ENSG00000004961.15 chrX:11112160:+ FASTKD1^ENSG00000138399.18 chr2:169544835:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:88498710:88508710 . YES_LDAS 0.1006 GT 1.231 AG 1.5656 ["INTERCHROMOSOMAL[chrX--chr2]"] chrX:11112160-chr2:169544835 False 0 Read count too low: 1 < 8 FAIL 1
HADH--NVL 1 0 1.0 0.0 ONLY_REF_SPLICE HADH^ENSG00000138796.17 chr4:107990064:+ NVL^ENSG00000143748.18 chr1:224250318:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:37835680:37845680 . YES_LDAS 0.1006 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr1]"] chr4:107990064-chr1:224250318 False 0 Read count too low: 1 < 8 FAIL 1
H2BC5--SPART 1 0 1.0 0.0 ONLY_REF_SPLICE H2BC5^ENSG00000158373.8 chr6:26158559:+ SPART^ENSG00000133104.14 chr13:36331596:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:22127750:22137750 . YES_LDAS 0.1006 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr13]"] chr6:26158559-chr13:36331596 False 0 Read count too low: 1 < 8 FAIL 1
H2BC18--CHD2 1 0 0.5 0.0 ONLY_REF_SPLICE H2BC18^ENSG00000203814.6 chr1:149811947:- CHD2^ENSG00000173575.22 chr15:93009145:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:25764610:25774610 . YES_LDAS 0.0503 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr15]"] chr1:149811947-chr15:93009145 False 0 Read count too low: 1 < 8 FAIL 1
H2BC12--BRD4 1 0 1.0 0.0 INCL_NON_REF_SPLICE H2BC12^ENSG00000197903.8 chr6:27146409:- BRD4^ENSG00000141867.19 chr19:15273133:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:75107340:75117340 . YES_LDAS 0.1006 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr19]"] chr6:27146409-chr19:15273133 False 0 Read count too low: 1 < 8 FAIL 1
H2AC6--CDKAL1 1 0 1.0 0.0 ONLY_REF_SPLICE H2AC6^ENSG00000180573.10 chr6:26124633:+ CDKAL1^ENSG00000145996.11 chr6:20781145:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:3702430:3712430 . YES_LDAS 0.1006 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr6:4.89Mb]"] chr6:26124633-chr6:20781145 False 0 Read count too low: 1 < 8 FAIL 1
GTF3C2-AS1--COPS3 1 0 1.0 0.0 ONLY_REF_SPLICE GTF3C2-AS1^ENSG00000234945.8 chr2:27340373:+ COPS3^ENSG00000141030.13 chr17:17260474:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:64748520:64758520 . NO_LDAS 0.1006 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr17]"] chr2:27340373-chr17:17260474 False 0 Read count too low: 1 < 8 FAIL 1
GSR--TCP11L2 1 0 1.0 0.0 INCL_NON_REF_SPLICE GSR^ENSG00000104687.14 chr8:30692979:- TCP11L2^ENSG00000166046.11 chr12:106323510:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:14704800:14714800 . NO_LDAS 0.1006 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr12]"] chr8:30692979-chr12:106323510 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GOSR2--TBC1D22A 1 0 1.0 0.0 ONLY_REF_SPLICE GOSR2^ENSG00000108433.17 chr17:46938704:+ TBC1D22A^ENSG00000054611.14 chr22:46878653:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:49035890:49045890 . YES_LDAS 0.1006 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr22]"] chr17:46938704-chr22:46878653 False 0 Read count too low: 1 < 8 FAIL 1
GOLGA8A--PRPF3 1 0 0.5 0.0 ONLY_REF_SPLICE GOLGA8A^ENSG00000175265.17 chr15:34387833:- PRPF3^ENSG00000117360.13 chr1:150327557:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:93020980:93030980 . YES_LDAS 0.0503 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr1]"] chr15:34387833-chr1:150327557 False 0 Read count too low: 1 < 8 FAIL 1
GOLGA8A--MTPAP 1 0 0.5 0.0 ONLY_REF_SPLICE GOLGA8A^ENSG00000175265.17 chr15:34383746:- MTPAP^ENSG00000107951.15 chr10:30369133:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:99293240:99303240 . NO_LDAS 0.0503 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr10]"] chr15:34383746-chr10:30369133 False 0 Read count too low: 1 < 8 FAIL 1
GNA13--VMP1 1 0 1.0 0.0 ONLY_REF_SPLICE GNA13^ENSG00000120063.10 chr17:65053502:- VMP1^ENSG00000062716.13 chr17:59773754:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:71456330:71466330 . NO_LDAS 0.1006 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr17:5.17Mb]"] chr17:65053502-chr17:59773754 False 0 Read count too low: 1 < 8 FAIL 1
GNA12--ZNF451 1 0 1.0 0.0 ONLY_REF_SPLICE GNA12^ENSG00000146535.14 chr7:2794928:- ZNF451^ENSG00000112200.17 chr6:57124734:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:59798100:59808100 . NO_LDAS 0.1006 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr6]"] chr7:2794928-chr6:57124734 False 0 Read count too low: 1 < 8 FAIL 1
GLYR1--SPHK2 1 0 0.2 0.0 INCL_NON_REF_SPLICE GLYR1^ENSG00000140632.17 chr16:4821547:- SPHK2^ENSG00000063176.16 chr19:48624277:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:42593230:42603230 . NO_LDAS 0.0201 GT 1.4566 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chr19]"] chr16:4821547-chr19:48624277 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GLYR1--ARRB1 1 0 0.2 0.0 INCL_NON_REF_SPLICE GLYR1^ENSG00000140632.17 chr16:4821547:- ARRB1^ENSG00000137486.17 chr11:75265965:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:42593230:42603230 . NO_LDAS 0.0201 GT 1.4566 AG 1.7232 ["INTERCHROMOSOMAL[chr16--chr11]"] chr16:4821547-chr11:75265965 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GLB1--UBP1 1 0 1.0 0.0 ONLY_REF_SPLICE GLB1^ENSG00000170266.16 chr3:33014056:- UBP1^ENSG00000153560.12 chr3:33425741:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:41705130:41715130 . YES_LDAS 0.1006 GT 1.9329 AG 1.7968 ["DEEPEST2019","INTRACHROMOSOMAL[chr3:0.29Mb]"] chr3:33014056-chr3:33425741 False 0 Read count too low: 1 < 8 FAIL 1
GBF1--SLC35E2B 1 0 1.0 0.0 ONLY_REF_SPLICE GBF1^ENSG00000107862.6 chr10:102358729:+ SLC35E2B^ENSG00000189339.12 chr1:1670151:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:19836040:19846040 . NO_LDAS 0.1006 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr1]"] chr10:102358729-chr1:1670151 False 0 Read count too low: 1 < 8 FAIL 1
GANAB--TOM1L2 1 0 1.0 0.0 INCL_NON_REF_SPLICE GANAB^ENSG00000089597.18 chr11:62633005:- TOM1L2^ENSG00000175662.18 chr17:17869341:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:26320350:26330350 . NO_LDAS 0.1006 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr17]"] chr11:62633005-chr17:17869341 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
GALNT7--AGL 1 0 1.0 0.0 ONLY_REF_SPLICE GALNT7^ENSG00000109586.12 chr4:173248440:+ AGL^ENSG00000162688.17 chr1:99916410:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:93299110:93309110 . YES_LDAS 0.1006 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr1]"] chr4:173248440-chr1:99916410 False 0 Read count too low: 1 < 8 FAIL 1
G3BP1--RARS1 1 0 1.0 0.0 ONLY_REF_SPLICE G3BP1^ENSG00000145907.16 chr5:151791062:+ RARS1^ENSG00000113643.9 chr5:168488602:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:94845810:94855810 . YES_LDAS 0.1006 GT 1.8256 AG 1.3383 ["INTRACHROMOSOMAL[chr5:16.67Mb]"] chr5:151791062-chr5:168488602 False 0 Read count too low: 1 < 8 FAIL 1
FP565260.3--PFKL 1 0 0.5 0.0 ONLY_REF_SPLICE FP565260.3^ENSG00000277117.5 chr21:5032217:+ PFKL^ENSG00000141959.17 chr21:44312978:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:65122310:65132310 . NO_LDAS 0.0503 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr21:39.26Mb]"] chr21:5032217-chr21:44312978 False 0 Read count too low: 1 < 8 FAIL 1
FCRL5--SIL1 1 0 1.0 0.0 ONLY_REF_SPLICE FCRL5^ENSG00000143297.19 chr1:157549560:- SIL1^ENSG00000120725.13 chr5:139127853:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:43117880:43127880 . NO_LDAS 0.1006 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr5]"] chr1:157549560-chr5:139127853 False 0 Read count too low: 1 < 8 FAIL 1
FCRL5--GATAD2B 1 0 1.0 0.0 ONLY_REF_SPLICE FCRL5^ENSG00000143297.19 chr1:157549560:- GATAD2B^ENSG00000143614.10 chr1:153828348:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:32827650:32837650 . NO_LDAS 0.1006 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr1:3.59Mb]"] chr1:157549560-chr1:153828348 False 0 Read count too low: 1 < 8 FAIL 1
FANCM--GOLGA5 1 0 1.0 0.0 ONLY_REF_SPLICE FANCM^ENSG00000187790.11 chr14:45136539:+ GOLGA5^ENSG00000066455.13 chr14:92806736:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:28423170:28433170 . YES_LDAS 0.1006 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr14:47.59Mb]"] chr14:45136539-chr14:92806736 False 0 Read count too low: 1 < 8 FAIL 1
FANCD2--RPUSD3 1 0 1.0 0.0 ONLY_REF_SPLICE FANCD2^ENSG00000144554.12 chr3:10092252:+ RPUSD3^ENSG00000156990.14 chr3:9840805:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:44260050:44270050 . YES_LDAS 0.1006 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.18Mb]"] chr3:10092252-chr3:9840805 False 0 Read count too low: 1 < 8 FAIL 1
FAM193A--TMEM168 1 0 1.0 0.0 ONLY_REF_SPLICE FAM193A^ENSG00000125386.16 chr4:2672372:+ TMEM168^ENSG00000146802.13 chr7:112775318:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:61992610:62002610 . YES_LDAS 0.1006 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr7]"] chr4:2672372-chr7:112775318 False 0 Read count too low: 1 < 8 FAIL 1
FAM120A--SCAMP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE FAM120A^ENSG00000048828.17 chr9:93564558:+ SCAMP2^ENSG00000140497.16 chr15:74852837:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:11108670:11118670 . NO_LDAS 0.1006 GT 1.4566 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr15]"] chr9:93564558-chr15:74852837 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FAAP24--GRAMD1A 1 0 1.0 0.0 ONLY_REF_SPLICE FAAP24^ENSG00000131944.10 chr19:32974212:+ GRAMD1A^ENSG00000089351.15 chr19:35011474:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:71941930:71951930 . NO_LDAS 0.1006 GT 1.9086 AG 1.4295 ["INTRACHROMOSOMAL[chr19:2.02Mb]"] chr19:32974212-chr19:35011474 False 0 Read count too low: 1 < 8 FAIL 1
EVL--SKIL 1 0 1.0 0.0 ONLY_REF_SPLICE EVL^ENSG00000196405.13 chr14:100097658:+ SKIL^ENSG00000136603.14 chr3:170359699:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:10701820:10711820 . NO_LDAS 0.1006 GT 1.8892 AG 1.3383 ["INTERCHROMOSOMAL[chr14--chr3]"] chr14:100097658-chr3:170359699 False 0 Read count too low: 1 < 8 FAIL 1
EVI2B--BUD31 1 0 1.0 0.0 ONLY_REF_SPLICE EVI2B^ENSG00000185862.7 chr17:31313979:- BUD31^ENSG00000106245.11 chr7:99411064:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:32724890:32734890 . YES_LDAS 0.1006 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr7]"] chr17:31313979-chr7:99411064 False 0 Read count too low: 1 < 8 FAIL 1
ETS1--FLI1 1 0 1.0 0.0 ONLY_REF_SPLICE ETS1^ENSG00000134954.14 chr11:128521913:- FLI1^ENSG00000151702.17 chr11:128758115:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:25954480:25964480 . YES_LDAS 0.1006 GT 1.3996 AG 1.7465 ["DEEPEST2019","ChimerSeq","INTRACHROMOSOMAL[chr11:0.10Mb]","LOCAL_INVERSION:-:+:[98977]"] chr11:128521913-chr11:128758115 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ERP44--KMT2C 1 0 1.0 0.0 ONLY_REF_SPLICE ERP44^ENSG00000023318.8 chr9:100052417:- KMT2C^ENSG00000055609.20 chr7:152199459:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:77356300:77366300 . YES_LDAS 0.1006 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr7]"] chr9:100052417-chr7:152199459 False 0 Read count too low: 1 < 8 FAIL 1
EPSTI1--ALG13 1 0 1.0 0.0 ONLY_REF_SPLICE EPSTI1^ENSG00000133106.15 chr13:42926336:- ALG13^ENSG00000101901.12 chrX:111717846:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:60893630:60903630 . NO_LDAS 0.1006 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr13--chrX]"] chr13:42926336-chrX:111717846 False 0 Read count too low: 1 < 8 FAIL 1
EPC2--SSH1 1 0 0.5 0.0 INCL_NON_REF_SPLICE EPC2^ENSG00000135999.12 chr2:148785003:+ SSH1^ENSG00000084112.15 chr12:108787833:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:72895260:72905260 . NO_LDAS 0.0503 GT 1.9086 AG 1.4716 ["INTERCHROMOSOMAL[chr2--chr12]"] chr2:148785003-chr12:108787833 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EPC2--AC025470.2 1 0 0.5 0.0 INCL_NON_REF_SPLICE EPC2^ENSG00000135999.12 chr2:148785003:+ AC025470.2^ENSG00000250961.2 chr5:57395120:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:72895260:72905260 . NO_LDAS 0.0503 GT 1.9086 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr5]"] chr2:148785003-chr5:57395120 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EML4--GRAMD1C 1 0 1.0 0.0 INCL_NON_REF_SPLICE EML4^ENSG00000143924.19 chr2:42330254:+ GRAMD1C^ENSG00000178075.20 chr3:113890805:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:43021660:43031660 . NO_LDAS 0.1006 GT 1.7968 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr3]"] chr2:42330254-chr3:113890805 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EMB--FBXL17 1 0 1.0 0.0 ONLY_REF_SPLICE EMB^ENSG00000170571.12 chr5:50428144:- FBXL17^ENSG00000145743.17 chr5:108224228:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:70593310:70603310 . YES_LDAS 0.1006 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr5:57.42Mb]"] chr5:50428144-chr5:108224228 False 0 Read count too low: 1 < 8 FAIL 1
ELP4--UVRAG 1 0 1.0 0.0 ONLY_REF_SPLICE ELP4^ENSG00000109911.19 chr11:31650221:+ UVRAG^ENSG00000198382.9 chr11:76115924:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:47461440:47471440 . YES_LDAS 0.1006 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr11:44.02Mb]"] chr11:31650221-chr11:76115924 False 0 Read count too low: 1 < 8 FAIL 1
ELOVL6--GALNT7 1 0 1.0 0.0 ONLY_REF_SPLICE ELOVL6^ENSG00000170522.10 chr4:110198247:- GALNT7^ENSG00000109586.12 chr4:173247980:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:17287640:17297640 . YES_LDAS 0.1006 GT 1.8323 AG 1.8323 ["INTRACHROMOSOMAL[chr4:62.97Mb]"] chr4:110198247-chr4:173247980 False 0 Read count too low: 1 < 8 FAIL 1
ELMO1--OSBPL9 1 0 1.0 0.0 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:37211386:- OSBPL9^ENSG00000117859.19 chr1:51745536:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:48644010:48654010 . NO_LDAS 0.1006 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr1]"] chr7:37211386-chr1:51745536 False 0 Read count too low: 1 < 8 FAIL 1
ELF4--TMLHE 1 0 1.0 0.0 ONLY_REF_SPLICE ELF4^ENSG00000102034.17 chrX:130110325:- TMLHE^ENSG00000185973.12 chrX:155524632:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:21973490:21983490 . YES_LDAS 0.1006 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chrX:25.38Mb]"] chrX:130110325-chrX:155524632 False 0 Read count too low: 1 < 8 FAIL 1
ELF2--RABGAP1L 1 0 1.0 0.0 ONLY_REF_SPLICE ELF2^ENSG00000109381.20 chr4:139084133:- RABGAP1L^ENSG00000152061.23 chr1:174393995:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:19710710:19720710 . YES_LDAS 0.1006 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr1]"] chr4:139084133-chr1:174393995 False 0 Read count too low: 1 < 8 FAIL 1
EIF4ENIF1--CD33 1 0 1.0 0.0 INCL_NON_REF_SPLICE EIF4ENIF1^ENSG00000184708.18 chr22:31463681:- CD33^ENSG00000105383.15 chr19:51238708:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:72053830:72063830 . NO_LDAS 0.1006 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr22--chr19]"] chr22:31463681-chr19:51238708 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EIF3D--PDLIM1 1 0 1.0 0.0 INCL_NON_REF_SPLICE EIF3D^ENSG00000100353.18 chr22:36519405:- PDLIM1^ENSG00000107438.9 chr10:95263954:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:66420430:66430430 . YES_LDAS 0.1006 GT 1.9219 AG 1.7056 ["INTERCHROMOSOMAL[chr22--chr10]"] chr22:36519405-chr10:95263954 False 0 Read count too low: 1 < 8 FAIL 1
EHD1--MTA3 1 0 1.0 0.0 ONLY_REF_SPLICE EHD1^ENSG00000110047.18 chr11:64874421:- MTA3^ENSG00000057935.14 chr2:42718988:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:32743360:32753360 . YES_LDAS 0.1006 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr2]"] chr11:64874421-chr2:42718988 False 0 Read count too low: 1 < 8 FAIL 1
EFL1--AC243562.2 1 0 0.17 0.0 INCL_NON_REF_SPLICE EFL1^ENSG00000140598.15 chr15:82214717:- AC243562.2^ENSG00000259683.1 chr15:84389732:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:63247510:63257510 . YES_LDAS 0.0171 GT 1.9086 AG 1.5058 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr15:2.13Mb]"] chr15:82214717-chr15:84389732 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
EEF2K--ASS1P12 1 0 1.0 0.0 INCL_NON_REF_SPLICE EEF2K^ENSG00000103319.12 chr16:22225975:+ ASS1P12^ENSG00000237437.1 chr9:32946131:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:83738220:83748220 . NO_LDAS 0.1006 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr16--chr9]"] chr16:22225975-chr9:32946131 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EEF1AKNMT--AC003086.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE EEF1AKNMT^ENSG00000010165.20 chr1:171787930:+ AC003086.1^ENSG00000287672.1 chr7:91885984:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:31529720:31539720 . NO_LDAS 0.1006 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr7]"] chr1:171787930-chr7:91885984 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EAF2--HCLS1 1 0 1.0 0.0 ONLY_REF_SPLICE EAF2^ENSG00000145088.9 chr3:121872788:+ HCLS1^ENSG00000180353.11 chr3:121637256:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:93308080:93318080 . YES_LDAS 0.1006 GT 1.7056 AG 1.8892 ["INTRACHROMOSOMAL[chr3:0.17Mb]"] chr3:121872788-chr3:121637256 False 0 Read count too low: 1 < 8 FAIL 1
E4F1--NCAPG2 1 0 1.0 0.0 ONLY_REF_SPLICE E4F1^ENSG00000167967.16 chr16:2229675:+ NCAPG2^ENSG00000146918.20 chr7:158631717:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:25746570:25756570 . YES_LDAS 0.1006 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr7]"] chr16:2229675-chr7:158631717 False 0 Read count too low: 1 < 8 FAIL 1
DYNC1H1--HSPA5 1 0 0.5 0.0 INCL_NON_REF_SPLICE DYNC1H1^ENSG00000197102.13 chr14:101986658:+ HSPA5^ENSG00000044574.9 chr9:125236646:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:65644170:65654170 . NO_LDAS 0.0503 GT 1.6895 AG 1.5546 ["INTERCHROMOSOMAL[chr14--chr9]"] chr14:101986658-chr9:125236646 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DYNC1H1--FAM160B2 1 0 0.5 0.0 INCL_NON_REF_SPLICE DYNC1H1^ENSG00000197102.13 chr14:101986658:+ FAM160B2^ENSG00000158863.22 chr8:22089822:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:65644170:65654170 . NO_LDAS 0.0503 GT 1.6895 AG 1.7056 ["INTERCHROMOSOMAL[chr14--chr8]"] chr14:101986658-chr8:22089822 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DUSP22--EXOC2 1 0 1.0 0.0 ONLY_REF_SPLICE DUSP22^ENSG00000112679.14 chr6:311962:+ EXOC2^ENSG00000112685.14 chr6:532610:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:73635840:73645840 . NO_LDAS 0.1006 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr6:0.13Mb]"] chr6:311962-chr6:532610 False 0 Read count too low: 1 < 8 FAIL 1
DSN1--DLGAP4 1 0 1.0 0.0 ONLY_REF_SPLICE DSN1^ENSG00000149636.16 chr20:36773394:- DLGAP4^ENSG00000080845.18 chr20:36524250:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:99440780:99450780 . YES_LDAS 0.1006 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr20:0.22Mb]"] chr20:36773394-chr20:36524250 False 0 Read count too low: 1 < 8 FAIL 1
DRG1--NPHP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE DRG1^ENSG00000185721.13 chr22:31400743:+ NPHP1^ENSG00000144061.14 chr2:110132646:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:31364300:31374300 . NO_LDAS 0.1006 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr2]"] chr22:31400743-chr2:110132646 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNMT1--SF3A2 1 0 1.0 0.0 ONLY_REF_SPLICE DNMT1^ENSG00000130816.17 chr19:10194820:- SF3A2^ENSG00000104897.10 chr19:2243382:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:88129900:88139900 . NO_LDAS 0.1006 GT 1.8323 AG 1.8256 ["INTRACHROMOSOMAL[chr19:7.88Mb]"] chr19:10194820-chr19:2243382 False 0 Read count too low: 1 < 8 FAIL 1
DNMT1--IGH-@-ext 1 0 0.2 0.0 INCL_NON_REF_SPLICE DNMT1^ENSG00000130816.17 chr19:10137087:- IGH-@-ext^IGH-.g@-ext chr14:105849424:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:45397100:45407100 . NO_LDAS 0.0201 AG 1.8256 AC 1.5656 ["INTERCHROMOSOMAL[chr19--chr14]"] chr19:10137087-chr14:105849424 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DNMT1--DUSP14 1 0 1.0 0.0 ONLY_REF_SPLICE DNMT1^ENSG00000130816.17 chr19:10159658:- DUSP14^ENSG00000276023.5 chr17:37510677:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:37897830:37907830 . YES_LDAS 0.1006 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr19--chr17]"] chr19:10159658-chr17:37510677 False 0 Read count too low: 1 < 8 FAIL 1
DNAJB12--PLCG2 1 0 1.0 0.0 INCL_NON_REF_SPLICE DNAJB12^ENSG00000148719.15 chr10:72336654:- PLCG2^ENSG00000197943.10 chr16:81958304:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:49050990:49060990 . YES_LDAS 0.1006 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr16]"] chr10:72336654-chr16:81958304 False 0 Read count too low: 1 < 8 FAIL 1
DNAI3--BAZ1A 1 0 1.0 0.0 ONLY_REF_SPLICE DNAI3^ENSG00000162643.13 chr1:85130112:+ BAZ1A^ENSG00000198604.11 chr14:34862322:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:36112720:36122720 . YES_LDAS 0.1006 GT 1.5546 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr14]"] chr1:85130112-chr14:34862322 False 0 Read count too low: 1 < 8 FAIL 1
DLST--CASP2 1 0 1.0 0.0 ONLY_REF_SPLICE DLST^ENSG00000119689.15 chr14:74891167:+ CASP2^ENSG00000106144.20 chr7:143304674:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:37163680:37173680 . YES_LDAS 0.1006 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr14--chr7]"] chr14:74891167-chr7:143304674 False 0 Read count too low: 1 < 8 FAIL 1
DIP2C--CSNK1E 1 0 1.0 0.0 INCL_NON_REF_SPLICE DIP2C^ENSG00000151240.17 chr10:345036:- CSNK1E^ENSG00000213923.13 chr22:38317374:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:69648040:69658040 . NO_LDAS 0.1006 GT 1.4716 AG 0.9183 ["INTERCHROMOSOMAL[chr10--chr22]"] chr10:345036-chr22:38317374 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DDX3Y--DOCK2 1 0 1.0 0.0 ONLY_REF_SPLICE DDX3Y^ENSG00000067048.17 chrY:12913062:+ DOCK2^ENSG00000134516.18 chr5:169840757:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:83457540:83467540 . YES_LDAS 0.1006 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chrY--chr5]"] chrY:12913062-chr5:169840757 False 0 Read count too low: 1 < 8 FAIL 1
DDX10--AL390760.1 1 0 0.5 0.0 ONLY_REF_SPLICE DDX10^ENSG00000178105.11 chr11:108715966:+ AL390760.1^ENSG00000203364.2 chr9:93148333:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:62711320:62721320 . NO_LDAS 0.0503 GT 1.6895 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr9]"] chr11:108715966-chr9:93148333 False 0 Read count too low: 1 < 8 FAIL 1
DDX10--AC006001.3 1 0 0.5 0.0 ONLY_REF_SPLICE DDX10^ENSG00000178105.11 chr11:108715966:+ AC006001.3^ENSG00000229180.7 chr7:66560675:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:62711320:62721320 . NO_LDAS 0.0503 GT 1.6895 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr7]"] chr11:108715966-chr7:66560675 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
DDI2--GALK2 1 0 1.0 0.0 ONLY_REF_SPLICE DDI2^ENSG00000197312.12 chr1:15617808:+ GALK2^ENSG00000156958.15 chr15:49201162:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:87120720:87130720 . YES_LDAS 0.1006 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] chr1:15617808-chr15:49201162 False 0 Read count too low: 1 < 8 FAIL 1
CYTH1--BAIAP3 1 0 1.0 0.0 ONLY_REF_SPLICE CYTH1^ENSG00000108669.16 chr17:78709650:- BAIAP3^ENSG00000007516.14 chr16:1347545:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:62204820:62214820 . NO_LDAS 0.1006 GT 1.9899 AG 1.5329 ["INTERCHROMOSOMAL[chr17--chr16]"] chr17:78709650-chr16:1347545 False 0 Read count too low: 1 < 8 FAIL 1
CYFIP2--STK10 1 0 1.0 0.0 ONLY_REF_SPLICE CYFIP2^ENSG00000055163.20 chr5:157361598:+ STK10^ENSG00000072786.13 chr5:172061268:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:84370600:84380600 . YES_LDAS 0.1006 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr5:14.65Mb]"] chr5:157361598-chr5:172061268 False 0 Read count too low: 1 < 8 FAIL 1
CTSC--SNX19 1 0 1.0 0.0 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88334937:- SNX19^ENSG00000120451.11 chr11:130908083:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:31307350:31317350 . YES_LDAS 0.1006 GT 1.6049 AG 1.7968 ["INTRACHROMOSOMAL[chr11:42.51Mb]"] chr11:88334937-chr11:130908083 False 0 Read count too low: 1 < 8 FAIL 1
CTSC--RAB38 1 0 1.0 0.0 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88300530:- RAB38^ENSG00000123892.12 chr11:88149955:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:56576070:56586070 . YES_LDAS 0.1006 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"] chr11:88300530-chr11:88149955 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CTSC--RAB38 1 0 1.0 0.0 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88296133:- RAB38^ENSG00000123892.12 chr11:88149955:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:57720080:57730080 . NO_LDAS 0.1006 GT 1.9899 AG 1.8062 ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"] chr11:88296133-chr11:88149955 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CTSB--SLC29A1 1 0 1.0 0.0 ONLY_REF_SPLICE CTSB^ENSG00000164733.22 chr8:11850866:- SLC29A1^ENSG00000112759.19 chr6:44231998:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:30000810:30010810 . YES_LDAS 0.1006 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr6]"] chr8:11850866-chr6:44231998 False 0 Read count too low: 1 < 8 FAIL 1
CSNK1D--SNRPC 1 0 1.0 0.0 ONLY_REF_SPLICE CSNK1D^ENSG00000141551.14 chr17:82265686:- SNRPC^ENSG00000124562.10 chr6:34770291:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:17804960:17814960 . YES_LDAS 0.1006 GT 1.6402 AG 1.4566 ["INTERCHROMOSOMAL[chr17--chr6]"] chr17:82265686-chr6:34770291 False 0 Read count too low: 1 < 8 FAIL 1
CPSF6--GRM8 1 0 1.0 0.0 INCL_NON_REF_SPLICE CPSF6^ENSG00000111605.18 chr12:69262562:+ GRM8^ENSG00000179603.18 chr7:126445313:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:94164960:94174960 . NO_LDAS 0.1006 GT 1.9899 AG 1.8256 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTERCHROMOSOMAL[chr12--chr7]"] chr12:69262562-chr7:126445313 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
CPHXL--SMURF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE CPHXL^ENSG00000283755.2 chr16:75714844:- SMURF2^ENSG00000108854.16 chr17:64545755:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:94323970:94333970 . NO_LDAS 0.1006 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr16--chr17]"] chr16:75714844-chr17:64545755 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
COX6C--MX1 1 0 1.0 0.0 ONLY_REF_SPLICE COX6C^ENSG00000164919.11 chr8:99887490:- MX1^ENSG00000157601.15 chr21:41449137:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:51761770:51771770 . YES_LDAS 0.1006 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr8--chr21]"] chr8:99887490-chr21:41449137 False 0 Read count too low: 1 < 8 FAIL 1
CNOT9--PASK 1 0 1.0 0.0 ONLY_REF_SPLICE CNOT9^ENSG00000144580.14 chr2:218568978:+ PASK^ENSG00000115687.14 chr2:241127451:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:55548520:55558520 . NO_LDAS 0.1006 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr2:22.51Mb]"] chr2:218568978-chr2:241127451 False 0 Read count too low: 1 < 8 FAIL 1
CNN2--PPP1R12C 1 0 1.0 0.0 ONLY_REF_SPLICE CNN2^ENSG00000064666.15 chr19:1032696:+ PPP1R12C^ENSG00000125503.13 chr19:55096335:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:4730980:4740980 . NO_LDAS 0.1006 GT 1.6402 AG 1.7968 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr19:54.05Mb]"] chr19:1032696-chr19:55096335 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CNBP--YBX3 1 0 1.0 0.0 INCL_NON_REF_SPLICE CNBP^ENSG00000169714.17 chr3:129171093:- YBX3^ENSG00000060138.13 chr12:10723304:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:85572340:85582340 . NO_LDAS 0.1006 GT 1.6402 AG 1.585 ["INTERCHROMOSOMAL[chr3--chr12]"] chr3:129171093-chr12:10723304 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CMIP--IGL-@-ext 1 0 1.0 0.0 INCL_NON_REF_SPLICE CMIP^ENSG00000153815.17 chr16:81645503:+ IGL-@-ext^IGL-.g@-ext chr22:22906681:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:66603490:66613490 . NO_LDAS 0.1006 AG 1.8256 GT 1.1033 ["INTERCHROMOSOMAL[chr16--chr22]"] chr16:81645503-chr22:22906681 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLN6--SLF1 1 0 1.0 0.0 ONLY_REF_SPLICE CLN6^ENSG00000128973.13 chr15:68218536:- SLF1^ENSG00000133302.13 chr5:94628811:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:74845950:74855950 . YES_LDAS 0.1006 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr5]"] chr15:68218536-chr5:94628811 False 0 Read count too low: 1 < 8 FAIL 1
CLK3--SCAPER 1 0 1.0 0.0 ONLY_REF_SPLICE CLK3^ENSG00000179335.19 chr15:74620225:+ SCAPER^ENSG00000140386.13 chr15:76665789:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:27863150:27873150 . YES_LDAS 0.1006 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr15:1.70Mb]"] chr15:74620225-chr15:76665789 False 0 Read count too low: 1 < 8 FAIL 1
CLIP2--MIOS 1 0 1.0 0.0 ONLY_REF_SPLICE CLIP2^ENSG00000106665.16 chr7:74380863:+ MIOS^ENSG00000164654.16 chr7:7605942:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:1550340:1560340 . NO_LDAS 0.1006 GT 1.6895 AG 1.7465 ["INTRACHROMOSOMAL[chr7:66.68Mb]"] chr7:74380863-chr7:7605942 False 0 Read count too low: 1 < 8 FAIL 1
CLINT1--STXBP4 1 0 1.0 0.0 ONLY_REF_SPLICE CLINT1^ENSG00000113282.14 chr5:157858930:- STXBP4^ENSG00000166263.13 chr17:55141310:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:59655060:59665060 . YES_LDAS 0.1006 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr5--chr17]"] chr5:157858930-chr17:55141310 False 0 Read count too low: 1 < 8 FAIL 1
CLEC17A--PDIA5 1 0 0.33 0.0 ONLY_REF_SPLICE CLEC17A^ENSG00000187912.12 chr19:14592358:+ PDIA5^ENSG00000065485.20 chr3:123209199:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:50984150:50994150 . YES_LDAS 0.0332 GT 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr19--chr3]"] chr19:14592358-chr3:123209199 False 0 Read count too low: 1 < 8 FAIL 1
CLEC17A--PDIA5 1 0 0.33 0.0 ONLY_REF_SPLICE CLEC17A^ENSG00000187912.12 chr19:14587691:+ PDIA5^ENSG00000065485.20 chr3:123209199:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:50984150:50994150 . YES_LDAS 0.0332 GT 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr19--chr3]"] chr19:14587691-chr3:123209199 False 0 Read count too low: 1 < 8 FAIL 1
CLEC17A--PDIA5 1 0 0.33 0.0 ONLY_REF_SPLICE CLEC17A^ENSG00000187912.12 chr19:14583434:+ PDIA5^ENSG00000065485.20 chr3:123209199:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:50984150:50994150 . YES_LDAS 0.0332 GT 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr19--chr3]"] chr19:14583434-chr3:123209199 False 0 Read count too low: 1 < 8 FAIL 1
CHD6--DZANK1 1 0 1.0 0.0 ONLY_REF_SPLICE CHD6^ENSG00000124177.16 chr20:41533050:- DZANK1^ENSG00000089091.16 chr20:18398626:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:55652570:55662570 . YES_LDAS 0.1006 GT 1.8062 AG 1.8323 ["INTRACHROMOSOMAL[chr20:22.93Mb]"] chr20:41533050-chr20:18398626 False 0 Read count too low: 1 < 8 FAIL 1
CHD4--EMP3 1 0 1.0 0.0 INCL_NON_REF_SPLICE CHD4^ENSG00000111642.16 chr12:6587712:- EMP3^ENSG00000142227.11 chr19:48325355:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:91130060:91140060 . NO_LDAS 0.1006 GT 1.9086 AG 0.9968 ["INTERCHROMOSOMAL[chr12--chr19]"] chr12:6587712-chr19:48325355 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHD2--HECTD4 1 0 1.0 0.0 ONLY_REF_SPLICE CHD2^ENSG00000173575.22 chr15:92901299:+ HECTD4^ENSG00000173064.13 chr12:112204623:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:83071730:83081730 . YES_LDAS 0.1006 GT 1.9329 AG 1.5219 ["INTERCHROMOSOMAL[chr15--chr12]"] chr15:92901299-chr12:112204623 False 0 Read count too low: 1 < 8 FAIL 1
CHD2--BIRC5 1 0 1.0 0.0 INCL_NON_REF_SPLICE CHD2^ENSG00000173575.22 chr15:92997269:+ BIRC5^ENSG00000089685.15 chr17:78214404:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:35497390:35507390 . NO_LDAS 0.1006 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr15--chr17]"] chr15:92997269-chr17:78214404 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CGRRF1--ANKIB1 1 0 1.0 0.0 ONLY_REF_SPLICE CGRRF1^ENSG00000100532.13 chr14:54522593:+ ANKIB1^ENSG00000001629.10 chr7:92343024:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:17066740:17076740 . YES_LDAS 0.1006 GT 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr7]"] chr14:54522593-chr7:92343024 False 0 Read count too low: 1 < 8 FAIL 1
CEP44--AC114801.3 1 0 0.25 0.0 INCL_NON_REF_SPLICE CEP44^ENSG00000164118.13 chr4:174316567:+ AC114801.3^ENSG00000249072.1 chr4:78008681:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:21967860:21977860 . NO_LDAS 0.0252 GT 1.2419 AG 1.6402 ["INTRACHROMOSOMAL[chr4:96.28Mb]"] chr4:174316567-chr4:78008681 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CEP250--SSH1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CEP250^ENSG00000126001.16 chr20:35491346:+ SSH1^ENSG00000084112.15 chr12:108787836:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54457300:54467300 . NO_LDAS 0.1006 GT 1.6402 AG 1.6729 ["INTERCHROMOSOMAL[chr20--chr12]"] chr20:35491346-chr12:108787836 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CDRT1--TRIM16 1 0 1.0 0.0 ONLY_REF_SPLICE CDRT1^ENSG00000241322.11 chr17:15615645:- TRIM16^ENSG00000221926.13 chr17:15683157:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:83430430:83440430 . YES_LDAS 0.1006 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr17:0.01Mb]","LOCAL_REARRANGEMENT:-:[8256]"] chr17:15615645-chr17:15683157 False 0 Read count too low: 1 < 8 FAIL 1
CDR2--MOB4 1 0 1.0 0.0 ONLY_REF_SPLICE CDR2^ENSG00000140743.8 chr16:22429796:- MOB4^ENSG00000115540.15 chr2:197523624:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:94502060:94512060 . YES_LDAS 0.1006 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr2]"] chr16:22429796-chr2:197523624 False 0 Read count too low: 1 < 8 FAIL 1
CDKN1A--TCF20 1 0 1.0 0.0 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ TCF20^ENSG00000100207.20 chr22:42215341:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:45250630:45260630 . YES_LDAS 0.1006 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr22]"] chr6:36678798-chr22:42215341 False 0 Read count too low: 1 < 8 FAIL 1
CDK5RAP3--BRD4 1 0 1.0 0.0 ONLY_REF_SPLICE CDK5RAP3^ENSG00000108465.15 chr17:47976822:+ BRD4^ENSG00000141867.19 chr19:15267551:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54237860:54247860 . YES_LDAS 0.1006 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:47976822-chr19:15267551 False 0 Read count too low: 1 < 8 FAIL 1
CDK5RAP2--SSH1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CDK5RAP2^ENSG00000136861.18 chr9:120487294:- SSH1^ENSG00000084112.15 chr12:108787836:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:50550750:50560750 . NO_LDAS 0.1006 GT 1.8256 AG 1.6729 ["INTERCHROMOSOMAL[chr9--chr12]"] chr9:120487294-chr12:108787836 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CDK5RAP2--ICE2 1 0 1.0 0.0 ONLY_REF_SPLICE CDK5RAP2^ENSG00000136861.18 chr9:120437295:- ICE2^ENSG00000128915.12 chr15:60456794:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:14923850:14933850 . YES_LDAS 0.1006 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr15]"] chr9:120437295-chr15:60456794 False 0 Read count too low: 1 < 8 FAIL 1
CD48--SNX27 1 0 1.0 0.0 ONLY_REF_SPLICE CD48^ENSG00000117091.10 chr1:160711682:- SNX27^ENSG00000143376.14 chr1:151658235:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:29570590:29580590 . YES_LDAS 0.1006 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr1:8.98Mb]"] chr1:160711682-chr1:151658235 False 0 Read count too low: 1 < 8 FAIL 1
CD44--USP6NL 1 0 1.0 0.0 ONLY_REF_SPLICE CD44^ENSG00000026508.20 chr11:35139370:+ USP6NL^ENSG00000148429.14 chr10:11527567:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:65950670:65960670 . YES_LDAS 0.1006 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr10]"] chr11:35139370-chr10:11527567 False 0 Read count too low: 1 < 8 FAIL 1
CD19--RBM28 1 0 1.0 0.0 INCL_NON_REF_SPLICE CD19^ENSG00000177455.15 chr16:28937132:+ RBM28^ENSG00000106344.8 chr7:128302049:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:84298580:84308580 . NO_LDAS 0.1006 GT 1.4295 AG 1.5058 ["INTERCHROMOSOMAL[chr16--chr7]"] chr16:28937132-chr7:128302049 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCNK--SETD3 1 0 1.0 0.0 ONLY_REF_SPLICE CCNK^ENSG00000090061.17 chr14:99481479:+ SETD3^ENSG00000183576.13 chr14:99413934:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:15790670:15800670 . NO_LDAS 0.1006 GT 1.8295 AG 1.6729 ["INTRACHROMOSOMAL[chr14:0.00Mb]","LOCAL_INVERSION:+:-:[280]"] chr14:99481479-chr14:99413934 False 0 Read count too low: 1 < 8 FAIL 1
CCND2--GDI1 1 0 0.5 0.0 INCL_NON_REF_SPLICE CCND2^ENSG00000118971.9 chr12:4300113:+ GDI1^ENSG00000203879.12 chrX:154442954:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:94450050:94460050 . NO_LDAS 0.0503 AT 0.9056 AC 1.5546 ["INTERCHROMOSOMAL[chr12--chrX]"] chr12:4300113-chrX:154442954 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCL4--DCAF5 1 0 1.0 0.0 ONLY_REF_SPLICE CCL4^ENSG00000275302.2 chr17:36103981:+ DCAF5^ENSG00000139990.18 chr14:69062511:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:62131930:62141930 . YES_LDAS 0.1006 GT 1.7968 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr14]"] chr17:36103981-chr14:69062511 False 0 Read count too low: 1 < 8 FAIL 1
CCDC6--BICC1 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC6^ENSG00000108091.11 chr10:59906122:- BICC1^ENSG00000122870.12 chr10:58620855:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:25140350:25150350 . NO_LDAS 0.1006 GT 1.8892 AG 1.9219 ["INTRACHROMOSOMAL[chr10:0.96Mb]"] chr10:59906122-chr10:58620855 False 0 Read count too low: 1 < 8 FAIL 1
CCDC50--CHL1 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC50^ENSG00000152492.15 chr3:191329723:+ CHL1^ENSG00000134121.10 chr3:244613:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:35420220:35430220 . YES_LDAS 0.1006 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chr3:190.92Mb]"] chr3:191329723-chr3:244613 False 0 Read count too low: 1 < 8 FAIL 1
CARS2--ZNF512 1 0 1.0 0.0 ONLY_REF_SPLICE CARS2^ENSG00000134905.17 chr13:110701438:- ZNF512^ENSG00000243943.10 chr2:27607845:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:92719670:92729670 . YES_LDAS 0.1006 GT 1.6402 AG 1.5058 ["INTERCHROMOSOMAL[chr13--chr2]"] chr13:110701438-chr2:27607845 False 0 Read count too low: 1 < 8 FAIL 1
CARD8-AS1--ZNF131 1 0 1.0 0.0 ONLY_REF_SPLICE CARD8-AS1^ENSG00000268001.1 chr19:48255794:+ ZNF131^ENSG00000172262.11 chr5:43122039:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:20754760:20764760 . YES_LDAS 0.1006 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr5]"] chr19:48255794-chr5:43122039 False 0 Read count too low: 1 < 8 FAIL 1
CANX--PPM1A 1 0 1.0 0.0 ONLY_REF_SPLICE CANX^ENSG00000127022.16 chr5:179710065:+ PPM1A^ENSG00000100614.18 chr14:60282684:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:20067950:20077950 . NO_LDAS 0.1006 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr14]"] chr5:179710065-chr14:60282684 False 0 Read count too low: 1 < 8 FAIL 1
C1D--MCEE 1 0 1.0 0.0 ONLY_REF_SPLICE C1D^ENSG00000197223.12 chr2:68062958:- MCEE^ENSG00000124370.11 chr2:71124543:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:25368290:25378290 . NO_LDAS 0.1006 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr2:3.00Mb]"] chr2:68062958-chr2:71124543 False 0 Read count too low: 1 < 8 FAIL 1
BRD4--AKAP8 1 0 1.0 0.0 ONLY_REF_SPLICE BRD4^ENSG00000141867.19 chr19:15332290:- AKAP8^ENSG00000105127.10 chr19:15362251:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:35070780:35080780 . YES_LDAS 0.1006 GT 1.9086 AG 1.9219 ["DEEPEST2019","INTRACHROMOSOMAL[chr19:0.02Mb]","LOCAL_REARRANGEMENT:-:[20840]"] chr19:15332290-chr19:15362251 False 0 Read count too low: 1 < 8 FAIL 1
BRD2--MLLT1 1 0 1.0 0.0 ONLY_REF_SPLICE BRD2^ENSG00000204256.14 chr6:32972927:+ MLLT1^ENSG00000130382.9 chr19:6270759:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:67492810:67502810 . YES_LDAS 0.1006 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr19]"] chr6:32972927-chr19:6270759 False 0 Read count too low: 1 < 8 FAIL 1
BRAF--PARP14 1 0 1.0 0.0 ONLY_REF_SPLICE BRAF^ENSG00000157764.14 chr7:140850111:- PARP14^ENSG00000173193.15 chr3:122727812:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:96529570:96539570 . NO_LDAS 0.1006 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr3]"] chr7:140850111-chr3:122727812 False 0 Read count too low: 1 < 8 FAIL 1
BPTF--DCXR 1 0 0.5 0.0 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ DCXR^ENSG00000169738.8 chr17:82037080:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:23140310:23150310 . NO_LDAS 0.0503 GT 1.5628 AG 1.6049 ["INTRACHROMOSOMAL[chr17:14.05Mb]"] chr17:67945620-chr17:82037080 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
BPTF--BSND 1 0 0.5 0.0 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ BSND^ENSG00000162399.9 chr1:55006997:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:23140310:23150310 . NO_LDAS 0.0503 GT 1.5628 AG 1.4256 ["INTERCHROMOSOMAL[chr17--chr1]"] chr17:67945620-chr1:55006997 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
BOLA2B--SMG1P2 1 0 0.5 0.0 INCL_NON_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30192996:- SMG1P2^ENSG00000205534.6 chr16:29548658:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:46971560:46981560 . YES_LDAS 0.0503 GC 1.8062 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:0.60Mb]"] chr16:30192996-chr16:29548658 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
BLNK--ABCD3 1 0 1.0 0.0 ONLY_REF_SPLICE BLNK^ENSG00000095585.17 chr10:96271352:- ABCD3^ENSG00000117528.14 chr1:94458607:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:34355370:34365370 . YES_LDAS 0.1006 GT 1.9086 AG 1.3383 ["INTERCHROMOSOMAL[chr10--chr1]"] chr10:96271352-chr1:94458607 False 0 Read count too low: 1 < 8 FAIL 1
BLK--ZC3H12D 1 0 1.0 0.0 ONLY_REF_SPLICE BLK^ENSG00000136573.14 chr8:11494591:+ ZC3H12D^ENSG00000178199.14 chr6:149474613:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:8129110:8139110 . YES_LDAS 0.1006 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr6]"] chr8:11494591-chr6:149474613 False 0 Read count too low: 1 < 8 FAIL 1
BCKDHB--AL359715.4 1 0 1.0 0.0 INCL_NON_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.4^ENSG00000279022.1 chr6:80440685:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:11484700:11494700 . YES_LDAS 0.1006 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[94460]"] chr6:80273221-chr6:80440685 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
BAZ1A--FAM156A 1 0 0.5 0.0 ONLY_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34874492:- FAM156A^ENSG00000268350.7 chrX:52956755:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:55400540:55410540 . NO_LDAS 0.0503 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chrX]"] chr14:34874492-chrX:52956755 False 0 Read count too low: 1 < 8 FAIL 1
B4GALT1--RIC1 1 0 1.0 0.0 ONLY_REF_SPLICE B4GALT1^ENSG00000086062.13 chr9:33166758:- RIC1^ENSG00000107036.12 chr9:5742869:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:33859830:33869830 . NO_LDAS 0.1006 GT 1.8062 AG 1.6402 ["INTRACHROMOSOMAL[chr9:27.33Mb]"] chr9:33166758-chr9:5742869 False 0 Read count too low: 1 < 8 FAIL 1
B2M--DNAJB6 1 0 1.0 0.0 ONLY_REF_SPLICE B2M^ENSG00000166710.21 chr15:44711613:+ DNAJB6^ENSG00000105993.15 chr7:157409795:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:18061160:18071160 . YES_LDAS 0.1006 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr7]"] chr15:44711613-chr7:157409795 False 0 Read count too low: 1 < 8 FAIL 1
AVL9--MSC-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE AVL9^ENSG00000105778.19 chr7:32495802:+ MSC-AS1^ENSG00000235531.11 chr8:71962923:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:91370080:91380080 . YES_LDAS 0.1006 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr8]"] chr7:32495802-chr8:71962923 False 0 Read count too low: 1 < 8 FAIL 1
ATXN2L--MVP 1 0 1.0 0.0 ONLY_REF_SPLICE ATXN2L^ENSG00000168488.18 chr16:28826986:+ MVP^ENSG00000013364.19 chr16:29840178:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:9024850:9034850 . YES_LDAS 0.1006 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr16:0.98Mb]"] chr16:28826986-chr16:29840178 False 0 Read count too low: 1 < 8 FAIL 1
ATP8B2--RET 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATP8B2^ENSG00000143515.19 chr1:154344450:+ RET^ENSG00000165731.20 chr10:43112148:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:39390140:39400140 . NO_LDAS 0.1006 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr10]"] chr1:154344450-chr10:43112148 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ASMTL--RACK1 1 0 1.0 0.0 ONLY_REF_SPLICE ASMTL^ENSG00000169093.16 chrX:1439097:- RACK1^ENSG00000204628.12 chr5:181239582:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:65891610:65901610 . YES_LDAS 0.1006 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr5]"] chrX:1439097-chr5:181239582 False 0 Read count too low: 1 < 8 FAIL 1
ARPC2--ITGAL 1 0 1.0 0.0 INCL_NON_REF_SPLICE ARPC2^ENSG00000163466.16 chr2:218228796:+ ITGAL^ENSG00000005844.19 chr16:30472769:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:8736380:8746380 . NO_LDAS 0.1006 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr16]"] chr2:218228796-chr16:30472769 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARL3--UEVLD 1 0 1.0 0.0 INCL_NON_REF_SPLICE ARL3^ENSG00000138175.9 chr10:102685816:- UEVLD^ENSG00000151116.17 chr11:18547024:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:43322130:43332130 . YES_LDAS 0.1006 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr11]"] chr10:102685816-chr11:18547024 False 0 Read count too low: 1 < 8 FAIL 1
ARID5B--CYB5D2 1 0 1.0 0.0 ONLY_REF_SPLICE ARID5B^ENSG00000150347.17 chr10:61902413:+ CYB5D2^ENSG00000167740.10 chr17:4149891:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:30056620:30066620 . YES_LDAS 0.1006 GT 1.8062 AG 1.8062 ["INTERCHROMOSOMAL[chr10--chr17]"] chr10:61902413-chr17:4149891 False 0 Read count too low: 1 < 8 FAIL 1
ARID3A--STK11 1 0 1.0 0.0 ONLY_REF_SPLICE ARID3A^ENSG00000116017.11 chr19:932742:+ STK11^ENSG00000118046.16 chr19:1218417:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:90261730:90271730 . NO_LDAS 0.1006 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.20Mb]"] chr19:932742-chr19:1218417 False 0 Read count too low: 1 < 8 FAIL 1
ARID3A--AHSA2P 1 0 1.0 0.0 ONLY_REF_SPLICE ARID3A^ENSG00000116017.11 chr19:932742:+ AHSA2P^ENSG00000173209.23 chr2:61178981:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:62774030:62784030 . YES_LDAS 0.1006 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr2]"] chr19:932742-chr2:61178981 False 0 Read count too low: 1 < 8 FAIL 1
ARID1B--WTAP 1 0 1.0 0.0 ONLY_REF_SPLICE ARID1B^ENSG00000049618.24 chr6:156779471:+ WTAP^ENSG00000146457.16 chr6:159738990:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:32468580:32478580 . YES_LDAS 0.1006 GT 1.9329 AG 1.8256 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr6:2.51Mb]"] chr6:156779471-chr6:159738990 False 0 Read count too low: 1 < 8 FAIL 1
ARID1A--CEP72 1 0 0.5 0.0 INCL_NON_REF_SPLICE ARID1A^ENSG00000117713.20 chr1:26697177:+ CEP72^ENSG00000112877.8 chr5:666069:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:61909660:61919660 . NO_LDAS 0.0503 GC 1.5546 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr5]"] chr1:26697177-chr5:666069 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARHGEF7--KLF13 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111153991:+ KLF13^ENSG00000169926.11 chr15:31372010:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:25606370:25616370 . YES_LDAS 0.1006 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr15]"] chr13:111153991-chr15:31372010 False 0 Read count too low: 1 < 8 FAIL 1
ARHGEF7--ACO2 1 0 1.0 0.0 INCL_NON_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111280677:+ ACO2^ENSG00000100412.17 chr22:41517434:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:6370860:6380860 . NO_LDAS 0.1006 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr22]"] chr13:111280677-chr22:41517434 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ARHGAP45--SET 1 0 1.0 0.0 ONLY_REF_SPLICE ARHGAP45^ENSG00000180448.11 chr19:1067495:+ SET^ENSG00000119335.17 chr9:128691170:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:86942610:86952610 . NO_LDAS 0.1006 GT 1.5628 AG 1.2419 ["INTERCHROMOSOMAL[chr19--chr9]"] chr19:1067495-chr9:128691170 False 0 Read count too low: 1 < 8 FAIL 1
ARHGAP26--RPS16 1 0 1.0 0.0 INCL_NON_REF_SPLICE ARHGAP26^ENSG00000145819.18 chr5:142894348:+ RPS16^ENSG00000105193.9 chr19:39433671:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:35751580:35761580 . NO_LDAS 0.1006 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr19]"] chr5:142894348-chr19:39433671 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
APTX--RABEP2 1 0 1.0 0.0 INCL_NON_REF_SPLICE APTX^ENSG00000137074.20 chr9:32983299:- RABEP2^ENSG00000177548.13 chr16:28914722:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:17282530:17292530 . YES_LDAS 0.1006 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr16]"] chr9:32983299-chr16:28914722 False 0 Read count too low: 1 < 8 FAIL 1
AP3B1--TENT2 1 0 1.0 0.0 ONLY_REF_SPLICE AP3B1^ENSG00000132842.14 chr5:78294452:- TENT2^ENSG00000164329.13 chr5:79668892:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:42058880:42068880 . YES_LDAS 0.1006 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr5:1.32Mb]"] chr5:78294452-chr5:79668892 False 0 Read count too low: 1 < 8 FAIL 1
AP000873.1--VPS13A 1 0 1.0 0.0 ONLY_REF_SPLICE AP000873.1^ENSG00000247137.9 chr11:83192736:- VPS13A^ENSG00000197969.14 chr9:77403236:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:29939360:29949360 . YES_LDAS 0.1006 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr9]"] chr11:83192736-chr9:77403236 False 0 Read count too low: 1 < 8 FAIL 1
ANKRD44--HMCN1 1 0 1.0 0.0 INCL_NON_REF_SPLICE ANKRD44^ENSG00000065413.20 chr2:197136588:- HMCN1^ENSG00000143341.12 chr1:185909359:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:8157550:8167550 . NO_LDAS 0.1006 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] chr2:197136588-chr1:185909359 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL590652.1--DNMT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AL590652.1^ENSG00000227885.3 chr6:53794499:- DNMT1^ENSG00000130816.17 chr19:10140161:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:10144450:10154450 . NO_LDAS 0.1006 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr6--chr19]"] chr6:53794499-chr19:10140161 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL357075.1--PCCA 1 0 0.5 0.0 INCL_NON_REF_SPLICE AL357075.1^ENSG00000275419.1 chr6:154542716:+ PCCA^ENSG00000175198.17 chr13:100425633:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:33626340:33636340 . NO_LDAS 0.0503 GT 1.7968 AG 1.4566 ["INTERCHROMOSOMAL[chr6--chr13]"] chr6:154542716-chr13:100425633 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AL356534.1--MYBL2 1 0 1.0 0.0 ONLY_REF_SPLICE AL356534.1^ENSG00000286215.1 chr6:126819392:- MYBL2^ENSG00000101057.16 chr20:43692157:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:2600820:2610820 . NO_LDAS 0.1006 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr20]"] chr6:126819392-chr20:43692157 False 0 Read count too low: 1 < 8 FAIL 1
AL132656.2--ABHD13 1 0 0.33 0.0 ONLY_REF_SPLICE AL132656.2^ENSG00000244733.5 chr10:79671133:+ ABHD13^ENSG00000139826.6 chr13:108229199:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:85575980:85585980 . YES_LDAS 0.0332 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr13]"] chr10:79671133-chr13:108229199 False 0 Read count too low: 1 < 8 FAIL 1
AKAP8L--CLCN7 1 0 1.0 0.0 ONLY_REF_SPLICE AKAP8L^ENSG00000011243.19 chr19:15418911:- CLCN7^ENSG00000103249.18 chr16:1465338:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:28001080:28011080 . YES_LDAS 0.1006 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr16]"] chr19:15418911-chr16:1465338 False 0 Read count too low: 1 < 8 FAIL 1
AIG1--PEX3 1 0 1.0 0.0 ONLY_REF_SPLICE AIG1^ENSG00000146416.19 chr6:143165183:+ PEX3^ENSG00000034693.15 chr6:143468122:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54154190:54164190 . YES_LDAS 0.1006 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.11Mb]"] chr6:143165183-chr6:143468122 False 0 Read count too low: 1 < 8 FAIL 1
AIFM1--MTG1 1 0 1.0 0.0 ONLY_REF_SPLICE AIFM1^ENSG00000156709.15 chrX:130165551:- MTG1^ENSG00000148824.19 chr10:133395713:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:57813280:57823280 . YES_LDAS 0.1006 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr10]"] chrX:130165551-chr10:133395713 False 0 Read count too low: 1 < 8 FAIL 1
AHRR--RBM5 1 0 1.0 0.0 ONLY_REF_SPLICE AHRR^ENSG00000063438.19 chr5:413433:+ RBM5^ENSG00000003756.17 chr3:50104248:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:71969770:71979770 . YES_LDAS 0.1006 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr3]"] chr5:413433-chr3:50104248 False 0 Read count too low: 1 < 8 FAIL 1
AGRN--SBNO2 1 0 1.0 0.0 ONLY_REF_SPLICE AGRN^ENSG00000188157.15 chr1:1035324:+ SBNO2^ENSG00000064932.16 chr19:1127765:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:53470800:53480800 . YES_LDAS 0.1006 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr19]"] chr1:1035324-chr19:1127765 False 0 Read count too low: 1 < 8 FAIL 1
AGRN--LIMD2 1 0 1.0 0.0 ONLY_REF_SPLICE AGRN^ENSG00000188157.15 chr1:1035324:+ LIMD2^ENSG00000136490.9 chr17:63699348:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:64880270:64890270 . YES_LDAS 0.1006 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr17]"] chr1:1035324-chr17:63699348 False 0 Read count too low: 1 < 8 FAIL 1
AGAP2--LSM14A 1 0 1.0 0.0 ONLY_REF_SPLICE AGAP2^ENSG00000135439.11 chr12:57741912:- LSM14A^ENSG00000257103.9 chr19:34215124:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:99127620:99137620 . YES_LDAS 0.1006 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr19]"] chr12:57741912-chr19:34215124 False 0 Read count too low: 1 < 8 FAIL 1
AGAP10P--BMS1P4 1 0 0.11 0.0 ONLY_REF_SPLICE AGAP10P^ENSG00000230869.1 chr10:45684520:+ BMS1P4^ENSG00000242338.6 chr10:73722577:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:63538660:63548660 . YES_LDAS 0.0111 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr10:28.02Mb]"] chr10:45684520-chr10:73722577 False 0 Read count too low: 1 < 8 FAIL 1
ADK--SAMD8 1 0 1.0 0.0 ONLY_REF_SPLICE ADK^ENSG00000156110.15 chr10:74224591:+ SAMD8^ENSG00000156671.15 chr10:75150514:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:79078550:79088550 . YES_LDAS 0.1006 GT 1.6402 AG 1.3996 ["INTRACHROMOSOMAL[chr10:0.39Mb]"] chr10:74224591-chr10:75150514 False 0 Read count too low: 1 < 8 FAIL 1
ADAMTS12--RSBN1 1 0 1.0 0.0 ONLY_REF_SPLICE ADAMTS12^ENSG00000151388.11 chr5:33576054:- RSBN1^ENSG00000081019.13 chr1:113798036:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:21886090:21896090 . YES_LDAS 0.1006 GT 1.6895 AG 1.5546 ["INTERCHROMOSOMAL[chr5--chr1]"] chr5:33576054-chr1:113798036 False 0 Read count too low: 1 < 8 FAIL 1
ADAM9--BMI1 1 0 1.0 0.0 ONLY_REF_SPLICE ADAM9^ENSG00000168615.13 chr8:38997160:+ BMI1^ENSG00000168283.14 chr10:22326431:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:98128830:98138830 . YES_LDAS 0.1006 GT 1.5329 AG 1.7968 ["INTERCHROMOSOMAL[chr8--chr10]"] chr8:38997160-chr10:22326431 False 0 Read count too low: 1 < 8 FAIL 1
ACBD3--MIR663AHG 1 0 1.0 0.0 INCL_NON_REF_SPLICE ACBD3^ENSG00000182827.9 chr1:226152335:- MIR663AHG^ENSG00000227195.11 chr20:26208385:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:63214380:63224380 . NO_LDAS 0.1006 GT 1.2867 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr20]"] chr1:226152335-chr20:26208385 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ACACA--TAF1D 1 0 1.0 0.0 ONLY_REF_SPLICE ACACA^ENSG00000278540.5 chr17:37330173:- TAF1D^ENSG00000166012.17 chr11:93730712:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:65590:75590 . YES_LDAS 0.1006 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr11]"] chr17:37330173-chr11:93730712 False 0 Read count too low: 1 < 8 FAIL 1
AC242842.2--GPN2 1 0 0.17 0.0 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ GPN2^ENSG00000142751.15 chr1:26889125:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:81839560:81849560 . YES_LDAS 0.0171 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr1:122.72Mb]"] chr1:149607554-chr1:26889125 False 0 Read count too low: 1 < 8 FAIL 1
AC242842.2--GABPA 1 0 0.2 0.0 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ GABPA^ENSG00000154727.11 chr21:25741573:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:12228890:12238890 . YES_LDAS 0.0201 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr21]"] chr1:149607554-chr21:25741573 False 0 Read count too low: 1 < 8 FAIL 1
AC233699.1--MTRNR2L1 1 0 0.5 0.0 INCL_NON_REF_SPLICE AC233699.1^ENSG00000261499.2 chr17:36307350:+ MTRNR2L1^ENSG00000256618.3 chr17:22523883:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:47369460:47379460 . NO_LDAS 0.0503 GT 1.5546 AG 1.2419 ["INTRACHROMOSOMAL[chr17:13.75Mb]"] chr17:36307350-chr17:22523883 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC093512.2--ADCY2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC093512.2^ENSG00000285043.2 chr16:30069510:+ ADCY2^ENSG00000078295.17 chr5:7804658:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:50300980:50310980 . NO_LDAS 0.1006 GT 1.8062 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr5]"] chr16:30069510-chr5:7804658 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC068989.1--DDX60 1 0 1.0 0.0 ONLY_REF_SPLICE AC068989.1^ENSG00000287188.1 chr4:168194397:- DDX60^ENSG00000137628.18 chr4:168237795:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:17642580:17652580 . YES_LDAS 0.1006 GT 1.7056 AG 1.9656 ["INTRACHROMOSOMAL[chr4:0.02Mb]","LOCAL_REARRANGEMENT:-:[21430]"] chr4:168194397-chr4:168237795 False 0 Read count too low: 1 < 8 FAIL 1
AC027097.1--TP53BP1 1 0 1.0 0.0 ONLY_REF_SPLICE AC027097.1^ENSG00000267040.6 chr18:57642052:+ TP53BP1^ENSG00000067369.14 chr15:43470066:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:20531320:20541320 . YES_LDAS 0.1006 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr18--chr15]"] chr18:57642052-chr15:43470066 False 0 Read count too low: 1 < 8 FAIL 1
AC026191.1--SRGAP3 1 0 1.0 0.0 ONLY_REF_SPLICE AC026191.1^ENSG00000254485.5 chr3:9326010:- SRGAP3^ENSG00000196220.16 chr3:9124917:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:24834010:24844010 . YES_LDAS 0.1006 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[42903]"] chr3:9326010-chr3:9124917 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
AC016074.2--CNOT10 1 0 1.0 0.0 ONLY_REF_SPLICE AC016074.2^ENSG00000286122.1 chr8:125680044:+ CNOT10^ENSG00000182973.19 chr3:32703868:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:33821460:33831460 . NO_LDAS 0.1006 GT 1.5656 AG 1.7056 ["INTERCHROMOSOMAL[chr8--chr3]"] chr8:125680044-chr3:32703868 False 0 Read count too low: 1 < 8 FAIL 1
AC015712.1--ATF7IP 1 0 1.0 0.0 ONLY_REF_SPLICE AC015712.1^ENSG00000232386.9 chr15:100850332:+ ATF7IP^ENSG00000171681.12 chr12:14434337:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:4:1101:16751650:16761650 . NO_LDAS 0.1006 GT 1.9656 AG 1.6402 ["INTERCHROMOSOMAL[chr15--chr12]"] chr15:100850332-chr12:14434337 False 0 Read count too low: 1 < 8 FAIL 1
AC008038.1--MX1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC008038.1^ENSG00000283041.1 chr7:133035034:- MX1^ENSG00000157601.15 chr21:41440917:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:88706400:88716400 . YES_LDAS 0.1006 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr21]"] chr7:133035034-chr21:41440917 False 0 Read count too low: 1 < 8 FAIL 1
AC007216.5--SNX29P1 1 0 0.02 0.0 INCL_NON_REF_SPLICE AC007216.5^ENSG00000277458.1 chr16:11926304:+ SNX29P1^ENSG00000158482.10 chr16:21380145:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:52262720:52272720 . NO_LDAS 0.002 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr16:9.45Mb]"] chr16:11926304-chr16:21380145 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC005695.1--MIGA2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC005695.1^ENSG00000262966.2 chr17:9176085:- MIGA2^ENSG00000148343.18 chr9:129070337:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:94733920:94743920 . NO_LDAS 0.1006 GT 0.9056 AG 1.3996 ["INTERCHROMOSOMAL[chr17--chr9]"] chr17:9176085-chr9:129070337 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC004687.1--TRAF2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004687.1^ENSG00000265206.5 chr17:58332470:- TRAF2^ENSG00000127191.18 chr9:136898713:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:54429170:54439170 . YES_LDAS 0.1006 GT 1.7968 AG 1.5058 ["INTERCHROMOSOMAL[chr17--chr9]"] chr17:58332470-chr9:136898713 False 0 Read count too low: 1 < 8 FAIL 1
AC004687.1--EML2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004687.1^ENSG00000265206.5 chr17:58332470:- EML2^ENSG00000125746.18 chr19:45638873:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:94446860:94456860 . YES_LDAS 0.1006 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:58332470-chr19:45638873 False 0 Read count too low: 1 < 8 FAIL 1
ABHD2--DLGAP5 1 0 1.0 0.0 ONLY_REF_SPLICE ABHD2^ENSG00000140526.18 chr15:89185516:+ DLGAP5^ENSG00000126787.13 chr14:55148473:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:2:1101:50089350:50099350 . YES_LDAS 0.1006 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr14]"] chr15:89185516-chr14:55148473 False 0 Read count too low: 1 < 8 FAIL 1
ABCA7--DPEP2NB 1 0 1.0 0.0 INCL_NON_REF_SPLICE ABCA7^ENSG00000064687.13 chr19:1054858:+ DPEP2NB^ENSG00000263201.1 chr16:68013775:- &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:81736130:81746130 . NO_LDAS 0.1006 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr16]"] chr19:1054858-chr16:68013775 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ABCA5--IGH-@-ext 1 0 0.25 0.0 INCL_NON_REF_SPLICE ABCA5^ENSG00000154265.16 chr17:69306793:- IGH-@-ext^IGH-.g@-ext chr14:106442007:+ &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:1:1101:12287730:12297730 . NO_LDAS 0.0252 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr14]"] chr17:69306793-chr14:106442007 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BMS1--IGH-@-ext 0 1 0.0 1.0 NO_JUNCTION_READS_IDENTIFIED BMS1^ENSG00000165733.8 chr10:42830974 IGH-@-ext^IGH-.g@-ext chr14:105913424 . &rna_s1200_S21@SYNTHESIZER:1:REGRESSION:3:1101:59370340:59380340 NO_LDAS 0.1006 ? ? ["INTERCHROMOSOMAL[chr10--chr14]"] False 0 Read count too low: 1 < 8 FAIL 1
494 rows