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rna_s1221_S42.starfusion.starfusion.fusion_predictions.filtered.tsv
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s3://natera-rnd-pltf-dev-s3-gitlab-results/rnafusion/build2786062/regression-run/63191069/starfusion/rna_s1221_S42.starfusion.starfusion.fusion_predictions.filtered.tsv
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Jun 03, 2026 3:01 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint JunctionReads SpanningFrags LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots breakpoint_ID blacklisted blacklist_reasons aih_curated_reason CALL filter_reason FILTER total_reads
FGFR3--TACC3 29 0 29.0 0.0 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ TACC3^ENSG00000013810.20 chr4:1739702:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:110254350:110264350,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:144045710:144055710,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:153535120:153545120,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:160550110:160560110,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:164815460:164825460,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165731810:165741810,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:170063320:170073320,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:178999920:179009920,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:112919410:112929410,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:118464700:118474700,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:124371890:124381890,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:139793760:139803760,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:142938110:142948110,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:145670420:145680420,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:150072740:150082740,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:163095770:163105770,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:188123480:188133480,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:199687200:199697200,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:127173320:127183320,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:151699350:151709350,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:163982960:163992960,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171930860:171940860,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:194263860:194273860,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:197101420:197111420,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:120300050:120310050,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:129123590:129133590,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:142537460:142547460,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:169368800:169378800,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:189380640:189390640 . YES_LDAS 2.9199 GT 1.8892 AG 1.7819 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","Klijn_CellLines","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr4:0.05Mb]","LOCAL_REARRANGEMENT:+:[48122]"] chr4:1806934-chr4:1739702 False 1 PASS 29
LMNA--NTRK1 22 0 22.0 0.0 ONLY_REF_SPLICE LMNA^ENSG00000160789.23 chr1:156130773:+ NTRK1^ENSG00000198400.13 chr1:156874906:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:106142050:106152050,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135814020:135824020,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:154376590:154386590,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:162985760:162995760,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:178383360:178393360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:183101920:183111920,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:185976960:185986960,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:188936360:188946360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:114170330:114180330,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:140089430:140099430,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:141994820:142004820,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:157079590:157089590,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:162923440:162933440,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:174359880:174369880,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:177787000:177797000,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:119331150:119341150,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:139444180:139454180,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:152444590:152454590,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:180678360:180688360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:142221230:142231230,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:168290960:168300960,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:182105480:182115480 . YES_LDAS 2.2151 GT 1.7465 AG 1.5058 ["ChimerKB","ChimerPub","Cosmic","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.68Mb]"] chr1:156130773-chr1:156874906 False 1 PASS 22
PAX8--PPARG 19 0 19.0 0.0 ONLY_REF_SPLICE PAX8^ENSG00000125618.18 chr2:113235394:- PPARG^ENSG00000132170.23 chr3:12379704:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:110557600:110567600,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:123685670:123695670,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:129145280:129155280,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135873490:135883490,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:142667990:142677990,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:145413880:145423880,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:160896630:160906630,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:175591860:175601860,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:114157790:114167790,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:186829560:186839560,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:105790680:105800680,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:107887330:107897330,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:125391490:125401490,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:170907060:170917060,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171041080:171051080,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:102689670:102699670,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:107114360:107124360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:129188250:129198250,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:154504510:154514510 . YES_LDAS 1.913 GT 1.8295 AG 1.9329 ["Mitelman","ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr2--chr3]"] chr2:113235394-chr3:12379704 False 1 PASS 19
ETV6--NTRK3 19 0 19.0 0.0 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11869969:+ NTRK3^ENSG00000140538.16 chr15:87940753:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:108436840:108446840,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:117665360:117675360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:143897140:143907140,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:109656140:109666140,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:114379060:114389060,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:187135080:187145080,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:194468760:194478760,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:112717140:112727140,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:115047590:115057590,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:142495850:142505850,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:163563280:163573280,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:167892680:167902680,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:176592440:176602440,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:193542040:193552040,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:107746990:107756990,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:125293000:125303000,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:142989740:142999740,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:180328560:180338560,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:199816980:199826980 . YES_LDAS 1.913 GT 1.7819 AG 1.9656 ["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr12--chr15]"] chr12:11869969-chr15:87940753 False 1 PASS 19
EGFR--SEPTIN14 19 0 19.0 0.0 ONLY_REF_SPLICE EGFR^ENSG00000146648.19 chr7:55200413:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:123837080:123847080,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:154211320:154221320,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:175887920:175897920,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:184009660:184019660,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:184188320:184198320,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:190825340:190835340,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:104544800:104554800,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:192037840:192047840,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:101331620:101341620,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:104460550:104470550,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:117301920:117311920,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:125998540:126008540,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:175966020:175976020,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:191697200:191707200,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:105963210:105973210,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:117795060:117805060,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:142980110:142990110,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:175531440:175541440,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:175621460:175631460 . YES_LDAS 1.913 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr7:0.58Mb]"] chr7:55200413-chr7:55796092 False 1 PASS 19
FGFR3--BAIAP2L1 17 0 17.0 0.0 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 chr7:98362432:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:102533240:102543240,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:133736800:133746800,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:159620770:159630770,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:162189670:162199670,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165144720:165154720,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165773160:165783160,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:157573110:157583110,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:104672530:104682530,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:125428790:125438790,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:154139900:154149900,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:156600120:156610120,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:166255480:166265480,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:177723880:177733880,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:121204890:121214890,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:167667880:167677880,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:176895300:176905300,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:181456980:181466980 . YES_LDAS 1.7116 GT 1.8892 AG 1.8062 ["ChimerKB","Klijn_CellLines","ChimerPub","Cosmic","CCLE_StarF2019","INTERCHROMOSOMAL[chr4--chr7]"] chr4:1806934-chr7:98362432 False 1 PASS 17
KIF5B--RET 15 0 15.0 0.0 ONLY_REF_SPLICE KIF5B^ENSG00000170759.11 chr10:32017143:- RET^ENSG00000165731.20 chr10:43114480:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:103070150:103080150,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:107479970:107489970,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:176792320:176802320,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:185165200:185175200,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:101734440:101744440,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:103771410:103781410,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:125250910:125260910,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:150086940:150096940,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:170177900:170187900,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:177425480:177435480,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:119669980:119679980,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:131014380:131024380,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:185301520:185311520,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:135013380:135023380,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:160998930:161008930 . YES_LDAS 1.5103 GT 1.9656 AG 1.9656 ["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTRACHROMOSOMAL[chr10:11.02Mb]"] chr10:32017143-chr10:43114480 False 1 PASS 15
CD74--ROS1 12 1 12.0 1.0 ONLY_REF_SPLICE CD74^ENSG00000019582.16 chr5:150404680:- ROS1^ENSG00000047936.11 chr6:117324415:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:123501700:123511700,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165849850:165859850,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:141458070:141468070,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:155946520:155956520,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:163839600:163849600,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:163939440:163949440,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:177099000:177109000,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:168414720:168424720,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:147556630:147566630,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:165006360:165016360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:167689610:167699610,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:185288800:185298800 &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:159296320:159306320 YES_LDAS 1.3089 GT 1.7819 AG 1.7465 ["ChimerKB","ChimerSeq","TCGA_StarF2019","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr5--chr6]"] chr5:150404680-chr6:117324415 False 1 PASS 13
NCOA4--RET 11 0 11.0 0.0 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46012883:- RET^ENSG00000165731.20 chr10:43116584:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:123748870:123758870,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:146132110:146142110,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:113709440:113719440,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:132675980:132685980,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:139941720:139951720,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:184004760:184014760,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:115141820:115151820,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:129575110:129585110,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:167336160:167346160,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:142941020:142951020,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:152609140:152619140 . YES_LDAS 1.1075 GT 1.9086 AG 1.8323 ["ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:2.87Mb]"] chr10:46012883-chr10:43116584 False 1 PASS 11
SLC45A3--BRAF 8 0 8.0 0.0 ONLY_REF_SPLICE SLC45A3^ENSG00000158715.6 chr1:205680394:- BRAF^ENSG00000157764.14 chr7:140794467:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:102019990:102029990,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:114480240:114490240,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:151846950:151856950,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:180341680:180351680,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:113217710:113227710,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:177309360:177319360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:183363880:183373880,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:194269680:194279680 . YES_LDAS 0.8055 GT 1.5628 AG 1.7465 ["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTERCHROMOSOMAL[chr1--chr7]"] chr1:205680394-chr7:140794467 False 1 PASS 8
CCDC6--RET 7 0 7.0 0.0 ONLY_REF_SPLICE CCDC6^ENSG00000108091.11 chr10:59906122:- RET^ENSG00000165731.20 chr10:43116584:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:109089400:109099400,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:175824400:175834400,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:128771480:128781480,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:127963900:127973900,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:159869100:159879100,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:163503910:163513910,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:195935080:195945080 . YES_LDAS 0.7048 GT 1.8892 AG 1.8323 ["Mitelman","ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:16.66Mb]"] chr10:59906122-chr10:43116584 False 0 Read count too low: 7 < 8 FAIL 7
TFG--NTRK1 6 0 6.0 0.0 ONLY_REF_SPLICE TFG^ENSG00000114354.15 chr3:100732672:+ NTRK1^ENSG00000198400.13 chr1:156874571:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:106200170:106210170,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:125502780:125512780,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165780740:165790740,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:168587920:168597920,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:185402840:185412840,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:177292020:177302020 . YES_LDAS 0.6041 GT 1.9329 AG 1.6895 ["ChimerKB","ChimerSeq","TCGA_StarF2019","HaasMedCancer","DEEPEST2019","chimerdb_pubmed","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr3--chr1]"] chr3:100732672-chr1:156874571 False 0 Read count too low: 6 < 8 FAIL 6
EML4--ALK 6 0 6.0 0.0 ONLY_REF_SPLICE EML4^ENSG00000143924.19 chr2:42295516:+ ALK^ENSG00000171094.18 chr2:29223528:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:128262090:128272090,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135792610:135802610,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:177669960:177679960,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:151282770:151292770,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:135316850:135326850,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:186659800:186669800 . YES_LDAS 0.6041 GT 1.6895 AG 1.9086 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr2:12.25Mb]"] chr2:42295516-chr2:29223528 False 0 Read count too low: 6 < 8 FAIL 6
TPM3--NTRK1 6 1 6.0 1.0 ONLY_REF_SPLICE TPM3^ENSG00000143549.21 chr1:154170400:- NTRK1^ENSG00000198400.13 chr1:156874571:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:170819600:170829600,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:178201220:178211220,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:100245160:100255160,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:155802760:155812760,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:175273260:175283260,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:121317540:121327540 &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:188988440:188998440 YES_LDAS 0.7048 GT 1.9329 AG 1.6895 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr1:2.62Mb]"] chr1:154170400-chr1:156874571 False 0 Read count too low: 7 < 8 FAIL 7
SLC34A2--ROS1 5 1 5.0 1.0 ONLY_REF_SPLICE SLC34A2^ENSG00000157765.13 chr4:25664330:+ ROS1^ENSG00000047936.11 chr6:117324415:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:130977870:130987870,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:141828610:141838610,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:115479950:115489950,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:136724050:136734050,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:167453070:167463070 &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:105933070:105943070 YES_LDAS 0.6041 GT 1.8892 AG 1.7465 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","Klijn_CellLines","GUO2018CR_TCGA","chimerdb_pubmed","ChimerPub","Cosmic","INTERCHROMOSOMAL[chr4--chr6]"] chr4:25664330-chr6:117324415 False 0 Read count too low: 6 < 8 FAIL 6
LEPROTL1--SMG1P3 3 0 1.5 0.0 ONLY_REF_SPLICE LEPROTL1^ENSG00000104660.19 chr8:30104991:+ SMG1P3^ENSG00000180747.15 chr16:21487616:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:104091140:104101140,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:145555660:145565660,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:101010680:101020680 . YES_LDAS 0.151 GC 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr16]"] chr8:30104991-chr16:21487616 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
FBXO25--SEPTIN14 3 0 3.0 0.0 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:153967000:153977000,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:156023390:156033390,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:112057940:112067940 . YES_LDAS 0.3021 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] chr8:435707-chr7:55796092 True aih_curated_blacklist score(6) 0 aih_curated_blacklist score(6) FAIL 3
CHST11--MME 3 0 3.0 0.0 INCL_NON_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ MME^ENSG00000196549.13 chr3:155183570:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:119265900:119275900,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:166493080:166503080,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:141603630:141613630 . NO_LDAS 0.3021 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr3]"] chr12:104601991-chr3:155183570 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 3
TRAPPC3--THRAP3 2 0 2.0 0.0 ONLY_REF_SPLICE TRAPPC3^ENSG00000054116.12 chr1:36149337:- THRAP3^ENSG00000054118.15 chr1:36282533:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:156338870:156348870,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:123982160:123992160 . YES_LDAS 0.2014 GT 1.5329 AG 1.5656 ["INTRACHROMOSOMAL[chr1:0.07Mb]","LOCAL_INVERSION:-:+:[68379]"] chr1:36149337-chr1:36282533 False 0 Read count too low: 2 < 8 FAIL 2
SAV1--GYPE 2 0 2.0 0.0 ONLY_REF_SPLICE SAV1^ENSG00000151748.15 chr14:50665179:- GYPE^ENSG00000197465.14 chr4:143880509:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:157601870:157611870,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:164225420:164235420 . YES_LDAS 0.2014 GT 1.9219 AG 1.8256 ["Greger_Normal","INTERCHROMOSOMAL[chr14--chr4]"] chr14:50665179-chr4:143880509 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
BOLA2B--SMG1P2 2 0 2.0 0.0 INCL_NON_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30193358:- SMG1P2^ENSG00000205534.6 chr16:29548658:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:116568530:116578530,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:187326240:187336240 . YES_LDAS 0.2014 GT 1.9329 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:0.60Mb]"] chr16:30193358-chr16:29548658 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
AC026191.1--SRGAP3 2 0 2.0 0.0 ONLY_REF_SPLICE AC026191.1^ENSG00000254485.5 chr3:9326010:- SRGAP3^ENSG00000196220.16 chr3:9124917:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:147069830:147079830,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:125922660:125932660 . YES_LDAS 0.2014 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[42903]"] chr3:9326010-chr3:9124917 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 2
AC009533.1--MIR4307HG 2 0 2.0 0.0 INCL_NON_REF_SPLICE AC009533.1^ENSG00000111788.10 chr12:9310083:+ MIR4307HG^ENSG00000257612.2 chr14:26881418:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:142258280:142268280,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:166826690:166836690 . NO_LDAS 0.2014 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr14]"] chr12:9310083-chr14:26881418 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 2
WASH5P--WASH6P 2 1 2.0 1.0 ONLY_REF_SPLICE WASH5P^ENSG00000282458.1 chr19:66346:- WASH6P^ENSG00000182484.15 chrX:156021999:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:181459360:181469360,&rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:199114320:199124320 &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:191248760:191258760 YES_LDAS 0.3021 GT 1.9656 AG 1.8256 ["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chrX]"] chr19:66346-chrX:156021999 True pair|recurrent breakpoints 0 Blacklisted FAIL 3
ZNF844--PARP14 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF844^ENSG00000223547.10 chr19:12064876:+ PARP14^ENSG00000173193.15 chr3:122713424:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:155384800:155394800 . NO_LDAS 0.1007 GT 1.6895 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr3]"] chr19:12064876-chr3:122713424 False 0 Read count too low: 1 < 8 FAIL 1
ZNF75D--AC234771.4 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF75D^ENSG00000186376.15 chrX:135343261:- AC234771.4^ENSG00000236491.1 chrX:135193082:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:175245520:175255520 . YES_LDAS 0.1007 GT 1.6895 AG 1.9899 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chrX:0.05Mb]","NEIGHBORS[54241]"] chrX:135343261-chrX:135193082 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ZNF462--TMEM245 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF462^ENSG00000148143.13 chr9:106939107:+ TMEM245^ENSG00000106771.13 chr9:109038117:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:147473030:147483030 . YES_LDAS 0.1007 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr9:2.00Mb]"] chr9:106939107-chr9:109038117 False 0 Read count too low: 1 < 8 FAIL 1
ZNF383--HIKESHI 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF383^ENSG00000188283.11 chr19:37224939:+ HIKESHI^ENSG00000149196.16 chr11:86337379:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:115839430:115849430 . NO_LDAS 0.1007 GT 1.9329 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr11]"] chr19:37224939-chr11:86337379 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ZNF277--KLHDC10 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF277^ENSG00000198839.10 chr7:112206807:+ KLHDC10^ENSG00000128607.14 chr7:130116445:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:147788340:147798340 . YES_LDAS 0.1007 GT 1.3996 AG 1.6402 ["INTRACHROMOSOMAL[chr7:17.73Mb]"] chr7:112206807-chr7:130116445 False 0 Read count too low: 1 < 8 FAIL 1
ZNF224--TOR1A 1 0 1.0 0.0 ONLY_REF_SPLICE ZNF224^ENSG00000267680.5 chr19:44094530:+ TOR1A^ENSG00000136827.12 chr9:129814222:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:152562960:152572960 . YES_LDAS 0.1007 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr9]"] chr19:44094530-chr9:129814222 False 0 Read count too low: 1 < 8 FAIL 1
ZNF182--RBSN 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF182^ENSG00000147118.12 chrX:47976127:- RBSN^ENSG00000131381.12 chr3:15074232:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:109675230:109685230 . NO_LDAS 0.1007 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr3]"] chrX:47976127-chr3:15074232 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ZNF154--SETSIP 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF154^ENSG00000179909.15 chr19:57708939:- SETSIP^ENSG00000230667.6 chr1:92075299:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:184065300:184075300 . YES_LDAS 0.1007 GT 1.8256 AG 1.2419 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:57708939-chr1:92075299 False 0 Read count too low: 1 < 8 FAIL 1
ZNF146--ZNF169 1 0 1.0 0.0 INCL_NON_REF_SPLICE ZNF146^ENSG00000167635.12 chr19:36236775:+ ZNF169^ENSG00000175787.17 chr9:94300969:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:171487920:171497920 . NO_LDAS 0.1007 GT 1.9086 AG 1.8892 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr9]"] chr19:36236775-chr9:94300969 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
ZFR--CCND2 1 0 1.0 0.0 ONLY_REF_SPLICE ZFR^ENSG00000056097.16 chr5:32444229:- CCND2^ENSG00000118971.9 chr12:4299860:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:186126120:186136120 . YES_LDAS 0.1007 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr12]"] chr5:32444229-chr12:4299860 False 0 Read count too low: 1 < 8 FAIL 1
ZEB1--NCOA3 1 0 1.0 0.0 ONLY_REF_SPLICE ZEB1^ENSG00000148516.22 chr10:31320698:+ NCOA3^ENSG00000124151.19 chr20:47622229:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:151657230:151667230 . YES_LDAS 0.1007 GT 1.7819 AG 1.6729 ["INTERCHROMOSOMAL[chr10--chr20]"] chr10:31320698-chr20:47622229 False 0 Read count too low: 1 < 8 FAIL 1
ZDHHC14--ARID1B 1 0 1.0 0.0 ONLY_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157382266:+ ARID1B^ENSG00000049618.24 chr6:157148624:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:170354500:170364500 . YES_LDAS 0.1007 GT 1.7056 AG 1.9086 ["DEEPEST2019","TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr6:0.17Mb]"] chr6:157382266-chr6:157148624 False 0 Read count too low: 1 < 8 FAIL 1
ZCCHC7--SLC1A1 1 0 1.0 0.0 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37126942:+ SLC1A1^ENSG00000106688.12 chr9:4544567:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:109072770:109082770 . YES_LDAS 0.1007 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr9:32.53Mb]"] chr9:37126942-chr9:4544567 False 0 Read count too low: 1 < 8 FAIL 1
ZC3HAV1L--EHMT1 1 0 1.0 0.0 ONLY_REF_SPLICE ZC3HAV1L^ENSG00000146858.8 chr7:139026708:- EHMT1^ENSG00000181090.21 chr9:137728349:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:191651120:191661120 . NO_LDAS 0.1007 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr9]"] chr7:139026708-chr9:137728349 False 0 Read count too low: 1 < 8 FAIL 1
YTHDC2--RPL29 1 0 1.0 0.0 INCL_NON_REF_SPLICE YTHDC2^ENSG00000047188.16 chr5:113581607:+ RPL29^ENSG00000162244.12 chr3:51993862:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:142163480:142173480 . NO_LDAS 0.1007 GT 1.9329 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr3]"] chr5:113581607-chr3:51993862 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
YTHDC1--ANKRD17 1 0 1.0 0.0 ONLY_REF_SPLICE YTHDC1^ENSG00000083896.13 chr4:68349726:- ANKRD17^ENSG00000132466.19 chr4:73092300:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:155400010:155410010 . YES_LDAS 0.1007 GT 1.5329 AG 1.9219 ["INTRACHROMOSOMAL[chr4:4.72Mb]"] chr4:68349726-chr4:73092300 False 0 Read count too low: 1 < 8 FAIL 1
YAF2--RYBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE YAF2^ENSG00000015153.15 chr12:42238155:- RYBP^ENSG00000163602.11 chr3:72446621:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:111953490:111963490 . YES_LDAS 0.1007 GT 1.5656 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr3]"] chr12:42238155-chr3:72446621 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
WTAP--FAF1 1 0 1.0 0.0 ONLY_REF_SPLICE WTAP^ENSG00000146457.16 chr6:159727703:+ FAF1^ENSG00000185104.20 chr1:50655528:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:169870020:169880020 . YES_LDAS 0.1007 GT 1.9329 AG 1.5058 ["INTERCHROMOSOMAL[chr6--chr1]"] chr6:159727703-chr1:50655528 False 0 Read count too low: 1 < 8 FAIL 1
WDR33--GOLPH3 1 0 1.0 0.0 ONLY_REF_SPLICE WDR33^ENSG00000136709.12 chr2:127811012:- GOLPH3^ENSG00000113384.14 chr5:32135686:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:148857640:148867640 . YES_LDAS 0.1007 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr5]"] chr2:127811012-chr5:32135686 False 0 Read count too low: 1 < 8 FAIL 1
WDR1--KIRREL1-IT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE WDR1^ENSG00000071127.17 chr4:10077317:- KIRREL1-IT1^ENSG00000226520.1 chr1:158030848:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:148837010:148847010 . NO_LDAS 0.1007 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr1]"] chr4:10077317-chr1:158030848 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WASL--VIRMA 1 0 0.25 0.0 INCL_NON_REF_SPLICE WASL^ENSG00000106299.8 chr7:123689042:- VIRMA^ENSG00000164944.12 chr8:94529114:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171761360:171771360 . NO_LDAS 0.0252 GT 1.7819 AG 1.2867 ["INTERCHROMOSOMAL[chr7--chr8]"] chr7:123689042-chr8:94529114 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WASL--MYCN 1 0 0.25 0.0 INCL_NON_REF_SPLICE WASL^ENSG00000106299.8 chr7:123689042:- MYCN^ENSG00000134323.12 chr2:15945511:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171761360:171771360 . NO_LDAS 0.0252 GT 1.7819 AG 1.2867 ["INTERCHROMOSOMAL[chr7--chr2]"] chr7:123689042-chr2:15945511 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WASL--APLP2 1 0 0.25 0.0 INCL_NON_REF_SPLICE WASL^ENSG00000106299.8 chr7:123689042:- APLP2^ENSG00000084234.18 chr11:130121774:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171761360:171771360 . NO_LDAS 0.0252 GT 1.7819 AG 1.2867 ["INTERCHROMOSOMAL[chr7--chr11]"] chr7:123689042-chr11:130121774 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WASL--APLP2 1 0 0.25 0.0 INCL_NON_REF_SPLICE WASL^ENSG00000106299.8 chr7:123689042:- APLP2^ENSG00000084234.18 chr11:130121750:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171761360:171771360 . NO_LDAS 0.0252 GT 1.7819 AG 1.2867 ["INTERCHROMOSOMAL[chr7--chr11]"] chr7:123689042-chr11:130121750 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
WASHC3--CABLES1 1 0 1.0 0.0 ONLY_REF_SPLICE WASHC3^ENSG00000120860.11 chr12:102050189:- CABLES1^ENSG00000134508.12 chr18:23257227:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:111308130:111318130 . NO_LDAS 0.1007 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr12--chr18]"] chr12:102050189-chr18:23257227 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
VPS4A--COG8 1 0 1.0 0.0 ONLY_REF_SPLICE VPS4A^ENSG00000132612.16 chr16:69311532:+ COG8^ENSG00000213380.16 chr16:69329179:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:102948170:102958170 . YES_LDAS 0.1007 GT 1.7968 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.01Mb]","NEIGHBORS_OVERLAP:+:-:[6799]"] chr16:69311532-chr16:69329179 False 0 Read count too low: 1 < 8 FAIL 1
UTRN--NAPSB 1 0 1.0 0.0 ONLY_REF_SPLICE UTRN^ENSG00000152818.18 chr6:144533260:+ NAPSB^ENSG00000131401.11 chr19:50335181:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:179842360:179852360 . YES_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr19]"] chr6:144533260-chr19:50335181 False 0 Read count too low: 1 < 8 FAIL 1
USP18--AP001122.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE USP18^ENSG00000184979.10 chr22:18161935:+ AP001122.1^ENSG00000245008.4 chr11:128686547:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:138283900:138293900 . NO_LDAS 0.1007 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr11]"] chr22:18161935-chr11:128686547 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
USO1--MYCBP2 1 0 1.0 0.0 ONLY_REF_SPLICE USO1^ENSG00000138768.15 chr4:75724885:+ MYCBP2^ENSG00000005810.18 chr13:77070711:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:185431820:185441820 . YES_LDAS 0.1007 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr13]"] chr4:75724885-chr13:77070711 False 0 Read count too low: 1 < 8 FAIL 1
URB2--PDS5A 1 0 1.0 0.0 ONLY_REF_SPLICE URB2^ENSG00000135763.10 chr1:229627759:+ PDS5A^ENSG00000121892.15 chr4:39926861:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:127934020:127944020 . YES_LDAS 0.1007 GT 1.3753 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr4]"] chr1:229627759-chr4:39926861 False 0 Read count too low: 1 < 8 FAIL 1
UIMC1--SIMC1 1 0 1.0 0.0 ONLY_REF_SPLICE UIMC1^ENSG00000087206.17 chr5:176951474:- SIMC1^ENSG00000170085.18 chr5:176322273:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:161269580:161279580 . YES_LDAS 0.1007 GT 1.7056 AG 1.8256 ["INTRACHROMOSOMAL[chr5:0.56Mb]"] chr5:176951474-chr5:176322273 False 0 Read count too low: 1 < 8 FAIL 1
UGCG--XPO6 1 0 1.0 0.0 ONLY_REF_SPLICE UGCG^ENSG00000148154.10 chr9:111897313:+ XPO6^ENSG00000169180.12 chr16:28181031:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:177866360:177876360 . NO_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr16]"] chr9:111897313-chr16:28181031 False 0 Read count too low: 1 < 8 FAIL 1
UBL5--SLC9A8 1 0 1.0 0.0 INCL_NON_REF_SPLICE UBL5^ENSG00000198258.11 chr19:9828389:+ SLC9A8^ENSG00000197818.12 chr20:49864728:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:130699450:130709450 . YES_LDAS 0.1007 GC 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr20]"] chr19:9828389-chr20:49864728 False 0 Read count too low: 1 < 8 FAIL 1
UBE2O--NCF1C 1 0 1.0 0.0 INCL_NON_REF_SPLICE UBE2O^ENSG00000175931.13 chr17:76401080:- NCF1C^ENSG00000165178.9 chr7:75165134:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:184960060:184970060 . NO_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr7]"] chr17:76401080-chr7:75165134 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
UBE2N--BICD1 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2N^ENSG00000177889.10 chr12:93441855:- BICD1^ENSG00000151746.15 chr12:32367670:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:110290240:110300240 . YES_LDAS 0.1007 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr12:61.02Mb]"] chr12:93441855-chr12:32367670 False 0 Read count too low: 1 < 8 FAIL 1
UBE2E2--TTC39A 1 0 1.0 0.0 ONLY_REF_SPLICE UBE2E2^ENSG00000182247.10 chr3:23217312:+ TTC39A^ENSG00000085831.16 chr1:51321825:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:185911560:185921560 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr1]"] chr3:23217312-chr1:51321825 False 0 Read count too low: 1 < 8 FAIL 1
TYW1--SLC16A1-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE TYW1^ENSG00000198874.13 chr7:67195337:+ SLC16A1-AS1^ENSG00000226419.8 chr1:112960477:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:151326240:151336240 . YES_LDAS 0.1007 GT 1.6729 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr1]"] chr7:67195337-chr1:112960477 False 0 Read count too low: 1 < 8 FAIL 1
TXNRD1--NSD2 1 0 1.0 0.0 ONLY_REF_SPLICE TXNRD1^ENSG00000198431.16 chr12:104289040:+ NSD2^ENSG00000109685.19 chr4:1974863:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:127282650:127292650 . YES_LDAS 0.1007 GT 1.9899 AG 1.9219 ["INTERCHROMOSOMAL[chr12--chr4]"] chr12:104289040-chr4:1974863 False 0 Read count too low: 1 < 8 FAIL 1
TUBGCP3--SND1 1 0 1.0 0.0 ONLY_REF_SPLICE TUBGCP3^ENSG00000126216.15 chr13:112587905:- SND1^ENSG00000197157.11 chr7:127721287:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:162923480:162933480 . YES_LDAS 0.1007 GT 1.6402 AG 1.8323 ["INTERCHROMOSOMAL[chr13--chr7]"] chr13:112587905-chr7:127721287 False 0 Read count too low: 1 < 8 FAIL 1
TTYH3--BEND3 1 0 1.0 0.0 ONLY_REF_SPLICE TTYH3^ENSG00000136295.15 chr7:2632278:+ BEND3^ENSG00000178409.14 chr6:107106162:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:116238240:116248240 . YES_LDAS 0.1007 GT 1.7819 AG 1.3996 ["INTERCHROMOSOMAL[chr7--chr6]"] chr7:2632278-chr6:107106162 False 0 Read count too low: 1 < 8 FAIL 1
TTC7A--CALM2 1 0 1.0 0.0 ONLY_REF_SPLICE TTC7A^ENSG00000068724.17 chr2:47060971:+ CALM2^ENSG00000143933.19 chr2:47170764:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:148847210:148857210 . YES_LDAS 0.1007 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr2:0.08Mb]","LOCAL_INVERSION:+:-:[83946]"] chr2:47060971-chr2:47170764 False 0 Read count too low: 1 < 8 FAIL 1
TTC37--ZSCAN18 1 0 1.0 0.0 INCL_NON_REF_SPLICE TTC37^ENSG00000198677.12 chr5:95543184:- ZSCAN18^ENSG00000121413.13 chr19:58109093:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:193308080:193318080 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr19]"] chr5:95543184-chr19:58109093 False 0 Read count too low: 1 < 8 FAIL 1
TRPS1--DSE 1 0 1.0 0.0 ONLY_REF_SPLICE TRPS1^ENSG00000104447.13 chr8:115587001:- DSE^ENSG00000111817.19 chr6:116399198:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:156781510:156791510 . NO_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr6]"] chr8:115587001-chr6:116399198 False 0 Read count too low: 1 < 8 FAIL 1
TRIM26--AKT2 1 0 1.0 0.0 ONLY_REF_SPLICE TRIM26^ENSG00000234127.9 chr6:30213305:- AKT2^ENSG00000105221.18 chr19:40265351:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:192701280:192711280 . YES_LDAS 0.1007 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr19]"] chr6:30213305-chr19:40265351 False 0 Read count too low: 1 < 8 FAIL 1
TRAPPC9--IGF2R 1 0 1.0 0.0 INCL_NON_REF_SPLICE TRAPPC9^ENSG00000167632.18 chr8:140275773:- IGF2R^ENSG00000197081.16 chr6:160078201:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:137735580:137745580 . YES_LDAS 0.1007 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr6]"] chr8:140275773-chr6:160078201 False 0 Read count too low: 1 < 8 FAIL 1
TRAPPC10--PHF11 1 0 1.0 0.0 ONLY_REF_SPLICE TRAPPC10^ENSG00000160218.13 chr21:44087928:+ PHF11^ENSG00000136147.18 chr13:49528511:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:137208540:137218540 . YES_LDAS 0.1007 GT 1.2729 AG 1.2366 ["INTERCHROMOSOMAL[chr21--chr13]"] chr21:44087928-chr13:49528511 False 0 Read count too low: 1 < 8 FAIL 1
TRAF1--MAP3K4 1 0 1.0 0.0 ONLY_REF_SPLICE TRAF1^ENSG00000056558.11 chr9:120923705:- MAP3K4^ENSG00000085511.20 chr6:161097080:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:110201710:110211710 . YES_LDAS 0.1007 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr6]"] chr9:120923705-chr6:161097080 False 0 Read count too low: 1 < 8 FAIL 1
TPTE2--IDS 1 0 0.33 0.0 ONLY_REF_SPLICE TPTE2^ENSG00000132958.17 chr13:19492850:- IDS^ENSG00000010404.18 chrX:149483218:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:117045130:117055130 . NO_LDAS 0.0332 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chrX]"] chr13:19492850-chrX:149483218 False 0 Read count too low: 1 < 8 FAIL 1
TPTE--MRPS31P2 1 0 0.5 0.0 ONLY_REF_SPLICE TPTE^ENSG00000274391.5 chr21:10559544:+ MRPS31P2^ENSG00000232894.1 chr13:19570288:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:126125400:126135400 . YES_LDAS 0.0503 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr21--chr13]"] chr21:10559544-chr13:19570288 True aih_curated_blacklist score(4) 0 aih_curated_blacklist score(4) FAIL 1
TPD52L2--CYTH1 1 0 1.0 0.0 INCL_NON_REF_SPLICE TPD52L2^ENSG00000101150.18 chr20:63890967:+ CYTH1^ENSG00000108669.16 chr17:78698894:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:186204900:186214900 . YES_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr17]"] chr20:63890967-chr17:78698894 False 0 Read count too low: 1 < 8 FAIL 1
TMPRSS2--ERG 1 0 1.0 0.0 ONLY_REF_SPLICE TMPRSS2^ENSG00000184012.14 chr21:41508081:- ERG^ENSG00000157554.19 chr21:38584945:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:169432080:169442080 . NO_LDAS 0.1007 GT 1.6895 AG 1.9219 ["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr21:2.80Mb]"] chr21:41508081-chr21:38584945 False 0 Read count too low: 1 < 8 FAIL 1
TMEM18--NR3C1 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM18^ENSG00000151353.15 chr2:677289:- NR3C1^ENSG00000113580.15 chr5:143400852:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:106364170:106374170 . YES_LDAS 0.1007 GT 1.7968 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr5]"] chr2:677289-chr5:143400852 False 0 Read count too low: 1 < 8 FAIL 1
TMEM167A--XRCC4 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM167A^ENSG00000174695.10 chr5:83077321:- XRCC4^ENSG00000152422.16 chr5:83104910:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:172481400:172491400 . YES_LDAS 0.1007 GT 1.7819 AG 1.5301 ["INTRACHROMOSOMAL[chr5:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[365]"] chr5:83077321-chr5:83104910 False 0 Read count too low: 1 < 8 FAIL 1
TMEM117--NHLRC3 1 0 1.0 0.0 ONLY_REF_SPLICE TMEM117^ENSG00000139173.10 chr12:44211387:+ NHLRC3^ENSG00000188811.14 chr13:39047040:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:158148120:158158120 . YES_LDAS 0.1007 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr13]"] chr12:44211387-chr13:39047040 False 0 Read count too low: 1 < 8 FAIL 1
TMED8--SSU72 1 0 1.0 0.0 ONLY_REF_SPLICE TMED8^ENSG00000100580.8 chr14:77376936:- SSU72^ENSG00000160075.12 chr1:1564916:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:113055080:113065080 . YES_LDAS 0.1007 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr1]"] chr14:77376936-chr1:1564916 False 0 Read count too low: 1 < 8 FAIL 1
TMBIM4--SMAD1 1 0 1.0 0.0 ONLY_REF_SPLICE TMBIM4^ENSG00000155957.18 chr12:66145841:- SMAD1^ENSG00000170365.10 chr4:145514438:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:189843960:189853960 . YES_LDAS 0.1007 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr4]"] chr12:66145841-chr4:145514438 False 0 Read count too low: 1 < 8 FAIL 1
THUMPD2--STON1 1 0 1.0 0.0 ONLY_REF_SPLICE THUMPD2^ENSG00000138050.15 chr2:39779114:- STON1^ENSG00000243244.7 chr2:48529880:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:126432050:126442050 . YES_LDAS 0.1007 GT 1.7056 AG 1.8323 ["INTRACHROMOSOMAL[chr2:8.75Mb]"] chr2:39779114-chr2:48529880 False 0 Read count too low: 1 < 8 FAIL 1
TEX10--PIGU 1 0 1.0 0.0 ONLY_REF_SPLICE TEX10^ENSG00000136891.14 chr9:100352772:- PIGU^ENSG00000101464.11 chr20:34616139:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:198604200:198614200 . YES_LDAS 0.1007 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr20]"] chr9:100352772-chr20:34616139 False 0 Read count too low: 1 < 8 FAIL 1
TCF12--CEP192 1 0 1.0 0.0 ONLY_REF_SPLICE TCF12^ENSG00000140262.18 chr15:57282598:+ CEP192^ENSG00000101639.18 chr18:13008456:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:181350120:181360120 . YES_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr18]"] chr15:57282598-chr18:13008456 False 0 Read count too low: 1 < 8 FAIL 1
TBC1D5--LINC00663 1 0 1.0 0.0 INCL_NON_REF_SPLICE TBC1D5^ENSG00000131374.14 chr3:17372063:- LINC00663^ENSG00000266904.6 chr19:19757429:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:113273000:113283000 . YES_LDAS 0.1007 GT 1.5219 AG 0.7219 ["INTERCHROMOSOMAL[chr3--chr19]"] chr3:17372063-chr19:19757429 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
TBC1D22A--CERK 1 0 1.0 0.0 ONLY_REF_SPLICE TBC1D22A^ENSG00000054611.14 chr22:46797620:+ CERK^ENSG00000100422.14 chr22:46721015:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:134502120:134512120 . YES_LDAS 0.1007 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr22:0.02Mb]","LOCAL_INVERSION:+:-:[24365]"] chr22:46797620-chr22:46721015 False 0 Read count too low: 1 < 8 FAIL 1
SYMPK--LONRF1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SYMPK^ENSG00000125755.19 chr19:45827510:- LONRF1^ENSG00000154359.13 chr8:12756048:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:123510750:123520750 . NO_LDAS 0.1007 GT 1.6895 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr8]"] chr19:45827510-chr8:12756048 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SUSD1--LAMP1 1 0 0.33 0.0 INCL_NON_REF_SPLICE SUSD1^ENSG00000106868.17 chr9:112175172:- LAMP1^ENSG00000185896.11 chr13:113309643:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:145158570:145168570 . NO_LDAS 0.0332 GC 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr13]"] chr9:112175172-chr13:113309643 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
STX17--RIF1 1 0 1.0 0.0 ONLY_REF_SPLICE STX17^ENSG00000136874.11 chr9:99960155:+ RIF1^ENSG00000080345.18 chr2:151428784:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:183655440:183665440 . YES_LDAS 0.1007 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr9--chr2]"] chr9:99960155-chr2:151428784 False 0 Read count too low: 1 < 8 FAIL 1
STX16--NPEPL1 1 0 1.0 0.0 ONLY_REF_SPLICE STX16^ENSG00000124222.22 chr20:58673711:+ NPEPL1^ENSG00000215440.12 chr20:58691724:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:151707580:151717580 . YES_LDAS 0.1007 GT 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr20:0.01Mb]","NEIGHBORS[9605]"] chr20:58673711-chr20:58691724 False 0 Read count too low: 1 < 8 FAIL 1
STOML2--OSBP 1 0 1.0 0.0 INCL_NON_REF_SPLICE STOML2^ENSG00000165283.16 chr9:35099906:- OSBP^ENSG00000110048.12 chr11:59615677:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:185533660:185543660 . YES_LDAS 0.1007 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr11]"] chr9:35099906-chr11:59615677 False 0 Read count too low: 1 < 8 FAIL 1
STMN1--C19orf54 1 0 1.0 0.0 INCL_NON_REF_SPLICE STMN1^ENSG00000117632.23 chr1:25901491:- C19orf54^ENSG00000188493.15 chr19:40749736:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:131708090:131718090 . YES_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr19]"] chr1:25901491-chr19:40749736 False 0 Read count too low: 1 < 8 FAIL 1
STAT1--AC096992.3 1 0 1.0 0.0 INCL_NON_REF_SPLICE STAT1^ENSG00000115415.20 chr2:190976840:- AC096992.3^ENSG00000286915.1 chr3:136780180:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:130992330:131002330 . NO_LDAS 0.1007 GT 1.5656 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr3]"] chr2:190976840-chr3:136780180 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ST6GAL1--CDK6 1 0 1.0 0.0 ONLY_REF_SPLICE ST6GAL1^ENSG00000073849.16 chr3:186996673:+ CDK6^ENSG00000105810.10 chr7:92774831:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:184156820:184166820 . YES_LDAS 0.1007 GT 1.7819 AG 1.2729 ["INTERCHROMOSOMAL[chr3--chr7]"] chr3:186996673-chr7:92774831 False 0 Read count too low: 1 < 8 FAIL 1
ST3GAL2--PLCXD1 1 0 1.0 0.0 ONLY_REF_SPLICE ST3GAL2^ENSG00000157350.13 chr16:70438949:- PLCXD1^ENSG00000182378.15 chrX:284167:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:177284320:177294320 . YES_LDAS 0.1007 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chrX]"] chr16:70438949-chrX:284167 False 0 Read count too low: 1 < 8 FAIL 1
SSR4--DDX19A 1 0 0.5 0.0 ONLY_REF_SPLICE SSR4^ENSG00000180879.14 chrX:153796552:+ DDX19A^ENSG00000168872.17 chr16:70371372:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:154016380:154026380 . YES_LDAS 0.0503 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr16]"] chrX:153796552-chr16:70371372 False 0 Read count too low: 1 < 8 FAIL 1
SRSF4--GSTCD 1 0 1.0 0.0 ONLY_REF_SPLICE SRSF4^ENSG00000116350.17 chr1:29181646:- GSTCD^ENSG00000138780.15 chr4:105717593:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:164337740:164347740 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr4]"] chr1:29181646-chr4:105717593 False 0 Read count too low: 1 < 8 FAIL 1
SREK1--PLXDC2 1 0 1.0 0.0 ONLY_REF_SPLICE SREK1^ENSG00000153914.16 chr5:66164897:+ PLXDC2^ENSG00000120594.17 chr10:20217426:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:183210560:183220560 . YES_LDAS 0.1007 GT 1.4716 AG 1.6402 ["INTERCHROMOSOMAL[chr5--chr10]"] chr5:66164897-chr10:20217426 False 0 Read count too low: 1 < 8 FAIL 1
SRC--RPN2 1 0 1.0 0.0 ONLY_REF_SPLICE SRC^ENSG00000197122.12 chr20:37365277:+ RPN2^ENSG00000118705.17 chr20:37223878:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:115746510:115756510 . YES_LDAS 0.1007 GT 1.8892 AG 1.9656 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr20:0.10Mb]"] chr20:37365277-chr20:37223878 False 0 Read count too low: 1 < 8 FAIL 1
SPIDR--PRKDC 1 0 1.0 0.0 ONLY_REF_SPLICE SPIDR^ENSG00000164808.17 chr8:47280017:+ PRKDC^ENSG00000253729.8 chr8:47831926:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:109640450:109650450 . YES_LDAS 0.1007 GT 1.9899 AG 1.5329 ["INTRACHROMOSOMAL[chr8:0.04Mb]","LOCAL_INVERSION:+:-:[36805]"] chr8:47280017-chr8:47831926 False 0 Read count too low: 1 < 8 FAIL 1
SPG11--SF3B3 1 0 1.0 0.0 ONLY_REF_SPLICE SPG11^ENSG00000104133.15 chr15:44626331:- SF3B3^ENSG00000189091.13 chr16:70544438:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:177012400:177022400 . YES_LDAS 0.1007 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr16]"] chr15:44626331-chr16:70544438 False 0 Read count too low: 1 < 8 FAIL 1
SPCS2--ADK 1 0 1.0 0.0 ONLY_REF_SPLICE SPCS2^ENSG00000118363.12 chr11:74949399:+ ADK^ENSG00000156110.15 chr10:74600379:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:184314400:184324400 . NO_LDAS 0.1007 GT 1.7819 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chr10]"] chr11:74949399-chr10:74600379 False 0 Read count too low: 1 < 8 FAIL 1
SP140--SP100 1 0 1.0 0.0 ONLY_REF_SPLICE SP140^ENSG00000079263.19 chr2:230225903:+ SP100^ENSG00000067066.17 chr2:230494416:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:117151520:117161520 . YES_LDAS 0.1007 GT 1.8256 AG 1.231 ["ConjoinG","HGNC_GENEFAM","INTRACHROMOSOMAL[chr2:0.10Mb]"] chr2:230225903-chr2:230494416 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
SP110--AL356273.2 1 0 1.0 0.0 INCL_NON_REF_SPLICE SP110^ENSG00000135899.19 chr2:230185994:- AL356273.2^ENSG00000238061.2 chr1:185281798:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:136976940:136986940 . NO_LDAS 0.1007 GT 1.8892 AG 0.9183 ["INTERCHROMOSOMAL[chr2--chr1]"] chr2:230185994-chr1:185281798 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SOCS6--MBD2 1 0 1.0 0.0 ONLY_REF_SPLICE SOCS6^ENSG00000170677.6 chr18:70289090:+ MBD2^ENSG00000134046.12 chr18:54164700:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:187299960:187309960 . YES_LDAS 0.1007 GT 1.2729 AG 1.8892 ["INTRACHROMOSOMAL[chr18:16.06Mb]"] chr18:70289090-chr18:54164700 False 0 Read count too low: 1 < 8 FAIL 1
SOAT1--EMB 1 0 0.5 0.0 ONLY_REF_SPLICE SOAT1^ENSG00000057252.13 chr1:179302802:+ EMB^ENSG00000170571.12 chr5:50411383:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:177473840:177483840 . NO_LDAS 0.0503 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr5]"] chr1:179302802-chr5:50411383 False 0 Read count too low: 1 < 8 FAIL 1
SNX29--TNFRSF17 1 0 1.0 0.0 INCL_NON_REF_SPLICE SNX29^ENSG00000048471.14 chr16:12027444:+ TNFRSF17^ENSG00000048462.11 chr16:11967735:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:197585380:197595380 . YES_LDAS 0.1007 GT 1.4566 AG 1.7968 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8666]"] chr16:12027444-chr16:11967735 False 0 Read count too low: 1 < 8 FAIL 1
SNX13--AHR 1 0 1.0 0.0 ONLY_REF_SPLICE SNX13^ENSG00000071189.21 chr7:17834052:- AHR^ENSG00000106546.14 chr7:17322501:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:127954200:127964200 . YES_LDAS 0.1007 GT 1.4566 AG 1.7819 ["INTRACHROMOSOMAL[chr7:0.44Mb]"] chr7:17834052-chr7:17322501 False 0 Read count too low: 1 < 8 FAIL 1
SNRNP200--RARS1 1 0 1.0 0.0 ONLY_REF_SPLICE SNRNP200^ENSG00000144028.15 chr2:96285180:- RARS1^ENSG00000113643.9 chr5:168488602:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:169521280:169531280 . YES_LDAS 0.1007 GT 1.7819 AG 1.3383 ["INTERCHROMOSOMAL[chr2--chr5]"] chr2:96285180-chr5:168488602 False 0 Read count too low: 1 < 8 FAIL 1
SNHG21--ZNF592 1 0 1.0 0.0 ONLY_REF_SPLICE SNHG21^ENSG00000250988.7 chr15:82754784:+ ZNF592^ENSG00000166716.10 chr15:84782657:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:169088580:169098580 . YES_LDAS 0.1007 GT 1.6729 AG 1.7232 ["INTRACHROMOSOMAL[chr15:1.99Mb]"] chr15:82754784-chr15:84782657 False 0 Read count too low: 1 < 8 FAIL 1
SMURF2P1--LRRC37BP1 1 0 1.0 0.0 ONLY_REF_SPLICE SMURF2P1^ENSG00000248121.8 chr17:30610942:+ LRRC37BP1^ENSG00000250462.8 chr17:30633098:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:122231800:122241800 . YES_LDAS 0.1007 GT 1.7819 AG 1.9329 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr17:0.01Mb]","NEIGHBORS[13700]"] chr17:30610942-chr17:30633098 False 0 Excluded annotation pattern: Babiceanu_Normal FAIL 1
SLF1--NDUFAF2 1 0 0.5 0.0 ONLY_REF_SPLICE SLF1^ENSG00000133302.13 chr5:94671008:+ NDUFAF2^ENSG00000164182.12 chr5:61098992:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:151330150:151340150 . YES_LDAS 0.0503 GT 1.8323 AG 1.8062 ["INTRACHROMOSOMAL[chr5:33.46Mb]"] chr5:94671008-chr5:61098992 False 0 Read count too low: 1 < 8 FAIL 1
SLC7A5P1--SMG1 1 0 1.0 0.0 ONLY_REF_SPLICE SLC7A5P1^ENSG00000260727.2 chr16:29613103:- SMG1^ENSG00000157106.17 chr16:18900044:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:103364500:103374500 . YES_LDAS 0.1007 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr16:10.69Mb]"] chr16:29613103-chr16:18900044 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SLC29A1--GAPDH 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC29A1^ENSG00000112759.19 chr6:44225821:+ GAPDH^ENSG00000111640.15 chr12:6537584:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:165946760:165956760 . NO_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr12]"] chr6:44225821-chr12:6537584 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
SLC15A4--ZNF250 1 0 1.0 0.0 INCL_NON_REF_SPLICE SLC15A4^ENSG00000139370.12 chr12:128808788:- ZNF250^ENSG00000196150.14 chr8:144881303:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:198995840:199005840 . NO_LDAS 0.1007 GT 1.8256 AG 1.5656 ["INTERCHROMOSOMAL[chr12--chr8]"] chr12:128808788-chr8:144881303 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SH3GL1--SAFB2 1 0 1.0 0.0 ONLY_REF_SPLICE SH3GL1^ENSG00000141985.9 chr19:4400324:- SAFB2^ENSG00000130254.12 chr19:5600260:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:135795490:135805490 . NO_LDAS 0.1007 GT 1.8256 AG 1.6402 ["INTRACHROMOSOMAL[chr19:1.19Mb]"] chr19:4400324-chr19:5600260 False 0 Read count too low: 1 < 8 FAIL 1
SH2D3C--SYNE1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SH2D3C^ENSG00000095370.20 chr9:127741788:- SYNE1^ENSG00000131018.24 chr6:152308503:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:119671670:119681670 . NO_LDAS 0.1007 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr6]"] chr9:127741788-chr6:152308503 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
SGPL1--PKM 1 0 1.0 0.0 ONLY_REF_SPLICE SGPL1^ENSG00000166224.17 chr10:70868433:+ PKM^ENSG00000067225.19 chr15:72219110:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165905710:165915710 . YES_LDAS 0.1007 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr15]"] chr10:70868433-chr15:72219110 False 0 Read count too low: 1 < 8 FAIL 1
SFMBT1--ATP1B3 1 0 1.0 0.0 ONLY_REF_SPLICE SFMBT1^ENSG00000163935.14 chr3:53046460:- ATP1B3^ENSG00000069849.11 chr3:141903620:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:102614840:102624840 . YES_LDAS 0.1007 GT 1.9656 AG 1.6729 ["INTRACHROMOSOMAL[chr3:88.83Mb]"] chr3:53046460-chr3:141903620 False 0 Read count too low: 1 < 8 FAIL 1
SERPINB9--DDX55 1 0 1.0 0.0 ONLY_REF_SPLICE SERPINB9^ENSG00000170542.6 chr6:2896053:- DDX55^ENSG00000111364.16 chr12:123619432:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:109735250:109745250 . YES_LDAS 0.1007 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr12]"] chr6:2896053-chr12:123619432 False 0 Read count too low: 1 < 8 FAIL 1
SEPTIN2--PRRC1 1 0 1.0 0.0 ONLY_REF_SPLICE SEPTIN2^ENSG00000168385.18 chr2:241335212:+ PRRC1^ENSG00000164244.21 chr5:127551707:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:145966030:145976030 . YES_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr5]"] chr2:241335212-chr5:127551707 False 0 Read count too low: 1 < 8 FAIL 1
SEPTIN14--AL031259.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AL031259.1^ENSG00000287411.1 chr6:170614324:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:175090040:175100040 . YES_LDAS 0.1007 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr6]"] chr7:55795924-chr6:170614324 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
SEL1L--TMEM138 1 0 1.0 0.0 ONLY_REF_SPLICE SEL1L^ENSG00000071537.14 chr14:81487390:- TMEM138^ENSG00000149483.12 chr11:61368597:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:135596460:135606460 . YES_LDAS 0.1007 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr11]"] chr14:81487390-chr11:61368597 False 0 Read count too low: 1 < 8 FAIL 1
SEC63--HNRNPUL1 1 0 1.0 0.0 ONLY_REF_SPLICE SEC63^ENSG00000025796.14 chr6:107957886:- HNRNPUL1^ENSG00000105323.17 chr19:41268223:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:188917720:188927720 . YES_LDAS 0.1007 GT 1.9086 AG 1.9219 ["INTERCHROMOSOMAL[chr6--chr19]"] chr6:107957886-chr19:41268223 False 0 Read count too low: 1 < 8 FAIL 1
SEC31A--SNW1 1 0 1.0 0.0 ONLY_REF_SPLICE SEC31A^ENSG00000138674.17 chr4:82821037:- SNW1^ENSG00000100603.14 chr14:77755120:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:143614550:143624550 . YES_LDAS 0.1007 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr14]"] chr4:82821037-chr14:77755120 False 0 Read count too low: 1 < 8 FAIL 1
SEC31A--ARHGAP15 1 0 1.0 0.0 ONLY_REF_SPLICE SEC31A^ENSG00000138674.17 chr4:82844386:- ARHGAP15^ENSG00000075884.14 chr2:143519266:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:142815880:142825880 . YES_LDAS 0.1007 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr2]"] chr4:82844386-chr2:143519266 False 0 Read count too low: 1 < 8 FAIL 1
SCO2--CIRBP 1 0 1.0 0.0 ONLY_REF_SPLICE SCO2^ENSG00000284194.3 chr22:50526246:- CIRBP^ENSG00000099622.14 chr19:1270928:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:110706250:110716250 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr19]"] chr22:50526246-chr19:1270928 False 0 Read count too low: 1 < 8 FAIL 1
SCFD1--SMARCA5 1 0 1.0 0.0 ONLY_REF_SPLICE SCFD1^ENSG00000092108.22 chr14:30700258:+ SMARCA5^ENSG00000153147.6 chr4:143540363:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:122791140:122801140 . YES_LDAS 0.1007 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr4]"] chr14:30700258-chr4:143540363 False 0 Read count too low: 1 < 8 FAIL 1
SCAPER--CCDC186 1 0 1.0 0.0 ONLY_REF_SPLICE SCAPER^ENSG00000140386.13 chr15:76504859:- CCDC186^ENSG00000165813.20 chr10:114163329:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:151205270:151215270 . NO_LDAS 0.1007 GT 1.8062 AG 1.6729 ["INTERCHROMOSOMAL[chr15--chr10]"] chr15:76504859-chr10:114163329 False 0 Read count too low: 1 < 8 FAIL 1
SCAMP1--RCBTB2 1 0 1.0 0.0 ONLY_REF_SPLICE SCAMP1^ENSG00000085365.18 chr5:78388914:+ RCBTB2^ENSG00000136161.13 chr13:48502914:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:113317510:113327510 . YES_LDAS 0.1007 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr13]"] chr5:78388914-chr13:48502914 False 0 Read count too low: 1 < 8 FAIL 1
SCAF1--PRR12 1 0 1.0 0.0 ONLY_REF_SPLICE SCAF1^ENSG00000126461.15 chr19:49646830:+ PRR12^ENSG00000126464.14 chr19:49614533:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:147128100:147138100 . YES_LDAS 0.1007 GT 1.5058 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.02Mb]","LOCAL_REARRANGEMENT:+:[15770]"] chr19:49646830-chr19:49614533 False 0 Read count too low: 1 < 8 FAIL 1
SBNO1--ANKLE2 1 0 1.0 0.0 ONLY_REF_SPLICE SBNO1^ENSG00000139697.14 chr12:123364701:- ANKLE2^ENSG00000176915.15 chr12:132755133:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:119374390:119384390 . NO_LDAS 0.1007 GT 1.7465 AG 1.7819 ["INTRACHROMOSOMAL[chr12:9.36Mb]"] chr12:123364701-chr12:132755133 False 0 Read count too low: 1 < 8 FAIL 1
SAMD5--SASH1 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:143950010:143960010 . NO_LDAS 0.1007 GT 1.8295 AG 1.9219 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"] chr6:147509387-chr6:148390134 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
SAMD12--TAF2 1 0 1.0 0.0 ONLY_REF_SPLICE SAMD12^ENSG00000177570.15 chr8:118580715:- TAF2^ENSG00000064313.12 chr8:119746934:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:122945760:122955760 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr8:1.11Mb]"] chr8:118580715-chr8:119746934 False 0 Read count too low: 1 < 8 FAIL 1
SAFB2--CDC42 1 0 0.5 0.0 ONLY_REF_SPLICE SAFB2^ENSG00000130254.12 chr19:5604583:- CDC42^ENSG00000070831.17 chr1:22078429:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:101159650:101169650 . YES_LDAS 0.0503 GT 1.5546 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:5604583-chr1:22078429 False 0 Read count too low: 1 < 8 FAIL 1
SAE1--KLC1 1 0 1.0 0.0 ONLY_REF_SPLICE SAE1^ENSG00000142230.13 chr19:47169923:+ KLC1^ENSG00000126214.21 chr14:103700655:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:127948880:127958880 . YES_LDAS 0.1007 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr14]"] chr19:47169923-chr14:103700655 False 0 Read count too low: 1 < 8 FAIL 1
RYBP--DIPK2A 1 0 1.0 0.0 ONLY_REF_SPLICE RYBP^ENSG00000163602.11 chr3:72446496:- DIPK2A^ENSG00000181744.9 chr3:143985543:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:145757170:145767170 . YES_LDAS 0.1007 GT 1.7465 AG 1.8295 ["INTRACHROMOSOMAL[chr3:71.53Mb]"] chr3:72446496-chr3:143985543 False 0 Read count too low: 1 < 8 FAIL 1
RTCB--TONSL 1 0 1.0 0.0 ONLY_REF_SPLICE RTCB^ENSG00000100220.12 chr22:32396074:- TONSL^ENSG00000160949.17 chr8:144429336:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:137131560:137141560 . NO_LDAS 0.1007 GT 1.9086 AG 1.7056 ["INTERCHROMOSOMAL[chr22--chr8]"] chr22:32396074-chr8:144429336 False 0 Read count too low: 1 < 8 FAIL 1
RSF1--USP14 1 0 1.0 0.0 ONLY_REF_SPLICE RSF1^ENSG00000048649.13 chr11:77820528:- USP14^ENSG00000101557.15 chr18:196637:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:140169010:140179010 . YES_LDAS 0.1007 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr18]"] chr11:77820528-chr18:196637 False 0 Read count too low: 1 < 8 FAIL 1
RRAS2--HERC1 1 0 1.0 0.0 ONLY_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14358763:- HERC1^ENSG00000103657.14 chr15:63775649:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:148975840:148985840 . YES_LDAS 0.1007 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr15]"] chr11:14358763-chr15:63775649 False 0 Read count too low: 1 < 8 FAIL 1
RPSA--SEPSECS 1 0 0.5 0.0 ONLY_REF_SPLICE RPSA^ENSG00000168028.14 chr3:39407786:+ SEPSECS^ENSG00000109618.13 chr4:25159107:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:195864040:195874040 . YES_LDAS 0.0503 GT 1.3996 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr4]"] chr3:39407786-chr4:25159107 False 0 Read count too low: 1 < 8 FAIL 1
RPSA--RPLP1 1 0 0.5 0.0 ONLY_REF_SPLICE RPSA^ENSG00000168028.14 chr3:39408724:+ RPLP1^ENSG00000137818.12 chr15:69455170:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:168126080:168136080 . YES_LDAS 0.0503 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr15]"] chr3:39408724-chr15:69455170 False 0 Read count too low: 1 < 8 FAIL 1
RPS5P8--SNU13 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS5P8^ENSG00000237730.1 chrX:6422672:- SNU13^ENSG00000100138.15 chr22:41675163:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:155056880:155066880 . YES_LDAS 0.1007 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr22]"] chrX:6422672-chr22:41675163 False 0 Read count too low: 1 < 8 FAIL 1
RPS4Y1--RELL2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS4Y1^ENSG00000129824.16 chrY:2844175:+ RELL2^ENSG00000164620.9 chr5:141638220:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:176772300:176782300 . YES_LDAS 0.1007 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chrY--chr5]"] chrY:2844175-chr5:141638220 False 0 Read count too low: 1 < 8 FAIL 1
RPS4X--TBL1XR1 1 0 1.0 0.0 ONLY_REF_SPLICE RPS4X^ENSG00000198034.11 chrX:72275053:- TBL1XR1^ENSG00000177565.18 chr3:177046189:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:137384730:137394730 . YES_LDAS 0.1007 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr3]"] chrX:72275053-chr3:177046189 False 0 Read count too low: 1 < 8 FAIL 1
RPS3A--LRBA 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS3A^ENSG00000145425.10 chr4:151103161:+ LRBA^ENSG00000198589.14 chr4:150848998:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:129725500:129735500 . YES_LDAS 0.1007 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr4:0.08Mb]","LOCAL_INVERSION:+:-:[83897]"] chr4:151103161-chr4:150848998 True read_through|ribosomal genes|RPS3A 0 Blacklisted FAIL 1
RPS3A--AC110998.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS3A^ENSG00000145425.10 chr4:151101162:+ AC110998.1^ENSG00000253223.1 chr8:66984872:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:160189250:160199250 . NO_LDAS 0.1007 GT 1.7968 AG 1.4295 ["INTERCHROMOSOMAL[chr4--chr8]"] chr4:151101162-chr8:66984872 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPS15--TAGLN2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPS15^ENSG00000115268.10 chr19:1440253:+ TAGLN2^ENSG00000158710.15 chr1:159919319:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:152838930:152848930 . NO_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:1440253-chr1:159919319 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPLP1--SHOC1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPLP1^ENSG00000137818.12 chr15:69453020:+ SHOC1^ENSG00000165181.16 chr9:111686767:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:123829100:123839100 . NO_LDAS 0.1007 GT 1.8892 AG 1.5628 ["INTERCHROMOSOMAL[chr15--chr9]"] chr15:69453020-chr9:111686767 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL29--MAP3K5 1 0 0.5 0.0 INCL_NON_REF_SPLICE RPL29^ENSG00000162244.12 chr3:51993896:- MAP3K5^ENSG00000197442.10 chr6:136613172:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:133208130:133218130 . YES_LDAS 0.0503 AT 1.5656 AC 1.5301 ["INTERCHROMOSOMAL[chr3--chr6]"] chr3:51993896-chr6:136613172 False 0 Read count too low: 1 < 8 FAIL 1
RPL27A--RPL12 1 0 1.0 0.0 ONLY_REF_SPLICE RPL27A^ENSG00000166441.13 chr11:8684892:+ RPL12^ENSG00000197958.13 chr9:127449708:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:165643940:165653940 . YES_LDAS 0.1007 GT 1.7968 AG 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr11--chr9]"] chr11:8684892-chr9:127449708 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
RPL27--KLK1 1 0 1.0 0.0 ONLY_REF_SPLICE RPL27^ENSG00000131469.15 chr17:43000102:+ KLK1^ENSG00000167748.11 chr19:50820443:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:149730630:149740630 . YES_LDAS 0.1007 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:43000102-chr19:50820443 False 0 Read count too low: 1 < 8 FAIL 1
RPL23--MACIR 1 0 1.0 0.0 ONLY_REF_SPLICE RPL23^ENSG00000125691.14 chr17:38852604:- MACIR^ENSG00000181751.10 chr5:103265908:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:193430360:193440360 . NO_LDAS 0.1007 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr5]"] chr17:38852604-chr5:103265908 False 0 Read count too low: 1 < 8 FAIL 1
RPL18A--DGAT1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL18A^ENSG00000105640.13 chr19:17861472:+ DGAT1^ENSG00000185000.12 chr8:144315457:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:158453090:158463090 . NO_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr8]"] chr19:17861472-chr8:144315457 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RPL17--RPL17P12 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL17^ENSG00000265681.7 chr18:49491405:- RPL17P12^ENSG00000230559.1 chr2:146194373:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:111418050:111428050 . NO_LDAS 0.1007 GT 1.9219 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTERCHROMOSOMAL[chr18--chr2]"] chr18:49491405-chr2:146194373 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
RPL14P5--RPL14P1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RPL14P5^ENSG00000225661.7 chrX:1009110:- RPL14P1^ENSG00000139239.7 chr12:62965905:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:129031860:129041860 . NO_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrY--chr12]"] chrX:1009110-chr12:62965905 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
ROCK1--UNC50 1 0 0.5 0.0 ONLY_REF_SPLICE ROCK1^ENSG00000067900.8 chr18:20953578:- UNC50^ENSG00000115446.12 chr2:98609756:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:134412540:134422540 . YES_LDAS 0.0503 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr2]"] chr18:20953578-chr2:98609756 False 0 Read count too low: 1 < 8 FAIL 1
RNVU1-27--AGO2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ AGO2^ENSG00000123908.12 chr8:140585311:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:175248560:175258560 . YES_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr8]"] chr1:148522796-chr8:140585311 False 0 Read count too low: 1 < 8 FAIL 1
RNU6-13P--ANAPC1P2 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNU6-13P^ENSG00000206975.1 chr8:56917190:+ ANAPC1P2^ENSG00000231259.5 chr2:87052887:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:154944000:154954000 . NO_LDAS 0.1007 GT 1.7232 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr2]"] chr8:56917190-chr2:87052887 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RNF213--NWD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RNF213^ENSG00000173821.19 chr17:80289837:+ NWD1^ENSG00000188039.16 chr19:16750181:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:131140260:131150260 . NO_LDAS 0.1007 GT 1.5628 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:80289837-chr19:16750181 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RIMKLA--CAMSAP1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RIMKLA^ENSG00000177181.15 chr1:42419655:+ CAMSAP1^ENSG00000130559.19 chr9:135883078:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:183730480:183740480 . NO_LDAS 0.1007 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr9]"] chr1:42419655-chr9:135883078 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
RIC1--PTK2B 1 0 1.0 0.0 ONLY_REF_SPLICE RIC1^ENSG00000107036.12 chr9:5656690:+ PTK2B^ENSG00000120899.18 chr8:27397548:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:130149200:130159200 . YES_LDAS 0.1007 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr8]"] chr9:5656690-chr8:27397548 False 0 Read count too low: 1 < 8 FAIL 1
RHOA--AL713852.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RHOA^ENSG00000067560.14 chr3:49375434:- AL713852.1^ENSG00000285847.2 chr1:184635711:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:138630780:138640780 . NO_LDAS 0.1007 GT 1.6895 AG 1.6402 ["INTERCHROMOSOMAL[chr3--chr1]"] chr3:49375434-chr1:184635711 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RHBDF2--RNF126 1 0 1.0 0.0 ONLY_REF_SPLICE RHBDF2^ENSG00000129667.13 chr17:76472686:- RNF126^ENSG00000070423.18 chr19:650296:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:182816440:182826440 . YES_LDAS 0.1007 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:76472686-chr19:650296 False 0 Read count too low: 1 < 8 FAIL 1
RFX3--FOXN3 1 0 1.0 0.0 ONLY_REF_SPLICE RFX3^ENSG00000080298.15 chr9:3525747:- FOXN3^ENSG00000053254.16 chr14:89412490:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:159619270:159629270 . YES_LDAS 0.1007 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr14]"] chr9:3525747-chr14:89412490 False 0 Read count too low: 1 < 8 FAIL 1
RFTN1--PIAS2 1 0 1.0 0.0 ONLY_REF_SPLICE RFTN1^ENSG00000131378.14 chr3:16493725:- PIAS2^ENSG00000078043.16 chr18:46864248:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:130753460:130763460 . YES_LDAS 0.1007 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr18]"] chr3:16493725-chr18:46864248 False 0 Read count too low: 1 < 8 FAIL 1
RELB--CEACAM16 1 0 1.0 0.0 INCL_NON_REF_SPLICE RELB^ENSG00000104856.14 chr19:45012276:+ CEACAM16^ENSG00000213892.12 chr19:44705693:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:199083040:199093040 . YES_LDAS 0.1007 GT 1.7968 AG 1.7968 ["INTRACHROMOSOMAL[chr19:0.29Mb]"] chr19:45012276-chr19:44705693 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--ZBTB8OS 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508905:+ ZBTB8OS^ENSG00000176261.15 chr1:32634072:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:107114540:107124540 . YES_LDAS 0.1007 GT 1.4295 AG 1.9219 ["INTRACHROMOSOMAL[chr1:4.06Mb]"] chr1:28508905-chr1:32634072 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--MED23 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ MED23^ENSG00000112282.18 chr6:131603204:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:157516840:157526840 . YES_LDAS 0.1007 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr6]"] chr1:28508160-chr6:131603204 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--LRRFIP1 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ LRRFIP1^ENSG00000124831.19 chr2:237772081:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:196502040:196512040 . NO_LDAS 0.1007 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr2]"] chr1:28508160-chr2:237772081 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--KLK1 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ KLK1^ENSG00000167748.11 chr19:50820443:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:111105490:111115490 . YES_LDAS 0.1007 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr19]"] chr1:28508160-chr19:50820443 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--HNF1B 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ HNF1B^ENSG00000275410.5 chr17:37739639:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:159658180:159668180 . YES_LDAS 0.1007 GT 1.7968 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr17]"] chr1:28508160-chr17:37739639 False 0 Read count too low: 1 < 8 FAIL 1
RCC1--DENND5B 1 0 1.0 0.0 ONLY_REF_SPLICE RCC1^ENSG00000180198.16 chr1:28508160:+ DENND5B^ENSG00000170456.16 chr12:31433248:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:119842130:119852130 . NO_LDAS 0.1007 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr12]"] chr1:28508160-chr12:31433248 False 0 Read count too low: 1 < 8 FAIL 1
RBM6--AHSA2P 1 0 1.0 0.0 ONLY_REF_SPLICE RBM6^ENSG00000004534.15 chr3:49962685:+ AHSA2P^ENSG00000173209.23 chr2:61178981:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:155433100:155443100 . YES_LDAS 0.1007 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr2]"] chr3:49962685-chr2:61178981 False 0 Read count too low: 1 < 8 FAIL 1
RBM39--PRSS23 1 0 1.0 0.0 INCL_NON_REF_SPLICE RBM39^ENSG00000131051.24 chr20:35729312:- PRSS23^ENSG00000150687.12 chr11:86937052:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:170616500:170626500 . NO_LDAS 0.1007 GT 1.9329 AG 1.3753 ["INTERCHROMOSOMAL[chr20--chr11]"] chr20:35729312-chr11:86937052 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
RBM14--RBM4 1 0 1.0 0.0 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ RBM4^ENSG00000173933.21 chr11:66639700:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:153603870:153613870 . YES_LDAS 0.1007 GT 1.7465 AG 1.9086 ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] chr11:66617057-chr11:66639700 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
RANBP3--AL391863.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RANBP3^ENSG00000031823.14 chr19:5931415:- AL391863.1^ENSG00000229502.5 chr6:157875042:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:136462030:136472030 . NO_LDAS 0.1007 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr6]"] chr19:5931415-chr6:157875042 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
RALGDS--AC003077.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE RALGDS^ENSG00000160271.16 chr9:133105932:- AC003077.1^ENSG00000287011.1 chr7:111761245:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:149079210:149089210 . YES_LDAS 0.1007 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr7]"] chr9:133105932-chr7:111761245 False 0 Read count too low: 1 < 8 FAIL 1
RAD18--NCOA1 1 0 1.0 0.0 ONLY_REF_SPLICE RAD18^ENSG00000070950.10 chr3:8935871:- NCOA1^ENSG00000084676.15 chr2:24643966:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:135654520:135664520 . YES_LDAS 0.1007 GT 1.9329 AG 1.3383 ["INTERCHROMOSOMAL[chr3--chr2]"] chr3:8935871-chr2:24643966 False 0 Read count too low: 1 < 8 FAIL 1
RABEPK--GNPTG 1 0 1.0 0.0 ONLY_REF_SPLICE RABEPK^ENSG00000136933.17 chr9:125232745:+ GNPTG^ENSG00000090581.10 chr16:1357700:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:115930590:115940590 . YES_LDAS 0.1007 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr16]"] chr9:125232745-chr16:1357700 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
RAB35--SKIL 1 0 1.0 0.0 INCL_NON_REF_SPLICE RAB35^ENSG00000111737.12 chr12:120099030:- SKIL^ENSG00000136603.14 chr3:170393023:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:144104250:144114250 . NO_LDAS 0.1007 GT 1.9329 AG 1.4295 ["INTERCHROMOSOMAL[chr12--chr3]"] chr12:120099030-chr3:170393023 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
R3HDM1--R3HDM2 1 0 1.0 0.0 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135639122:+ R3HDM2^ENSG00000179912.20 chr12:57297387:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:164585220:164595220 . NO_LDAS 0.1007 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr12]"] chr2:135639122-chr12:57297387 False 0 Read count too low: 1 < 8 FAIL 1
PYGO2--HOXA11 1 0 0.5 0.0 INCL_NON_REF_SPLICE PYGO2^ENSG00000163348.4 chr1:154959264:- HOXA11^ENSG00000005073.6 chr7:27182433:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:118581380:118591380 . NO_LDAS 0.0503 GT 1.8323 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr7]"] chr1:154959264-chr7:27182433 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PSMC2--ORC5 1 0 1.0 0.0 ONLY_REF_SPLICE PSMC2^ENSG00000161057.13 chr7:103347781:+ ORC5^ENSG00000164815.11 chr7:104136893:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:102291000:102301000 . NO_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.76Mb]"] chr7:103347781-chr7:104136893 False 0 Read count too low: 1 < 8 FAIL 1
PRMT9--AFF1 1 0 1.0 0.0 ONLY_REF_SPLICE PRMT9^ENSG00000164169.13 chr4:147653852:- AFF1^ENSG00000172493.22 chr4:87046166:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:120142690:120152690 . YES_LDAS 0.1007 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr4:60.50Mb]"] chr4:147653852-chr4:87046166 False 0 Read count too low: 1 < 8 FAIL 1
PRAG1--USP14 1 0 1.0 0.0 INCL_NON_REF_SPLICE PRAG1^ENSG00000275342.5 chr8:8376250:- USP14^ENSG00000101557.15 chr18:198072:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:175313720:175323720 . NO_LDAS 0.1007 GC 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr18]"] chr8:8376250-chr18:198072 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PPTC7--TNFAIP3 1 0 1.0 0.0 ONLY_REF_SPLICE PPTC7^ENSG00000196850.6 chr12:110582809:- TNFAIP3^ENSG00000118503.15 chr6:137871213:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:143314890:143324890 . NO_LDAS 0.1007 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr6]"] chr12:110582809-chr6:137871213 False 0 Read count too low: 1 < 8 FAIL 1
PPP1R13B--BRF1 1 0 1.0 0.0 ONLY_REF_SPLICE PPP1R13B^ENSG00000088808.18 chr14:103847299:- BRF1^ENSG00000185024.17 chr14:105221914:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:120864270:120874270 . YES_LDAS 0.1007 GT 1.8323 AG 1.8062 ["INTRACHROMOSOMAL[chr14:1.36Mb]"] chr14:103847299-chr14:105221914 False 0 Read count too low: 1 < 8 FAIL 1
POTEG--PHKB 1 0 0.5 0.0 ONLY_REF_SPLICE POTEG^ENSG00000187537.13 chr14:19409333:- PHKB^ENSG00000102893.16 chr16:47689041:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:103771110:103781110 . YES_LDAS 0.0503 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr14--chr16]"] chr14:19409333-chr16:47689041 False 0 Read count too low: 1 < 8 FAIL 1
POLR2J4--UPK3BL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLR2J4^ENSG00000272655.2 chr7:44013593:- UPK3BL1^ENSG00000267368.1 chr7:102640773:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:165738810:165748810 . YES_LDAS 0.1007 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr7:58.62Mb]"] chr7:44013593-chr7:102640773 False 0 Read count too low: 1 < 8 FAIL 1
POLG--CHIC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE POLG^ENSG00000140521.17 chr15:89333170:- CHIC2^ENSG00000109220.11 chr4:54064267:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:101943710:101953710 . NO_LDAS 0.1007 GT 1.6402 AG 1.3383 ["INTERCHROMOSOMAL[chr15--chr4]"] chr15:89333170-chr4:54064267 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PLD1--TMEM165 1 0 1.0 0.0 ONLY_REF_SPLICE PLD1^ENSG00000075651.16 chr3:171733444:- TMEM165^ENSG00000134851.13 chr4:55411614:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:157540380:157550380 . YES_LDAS 0.1007 GT 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chr3--chr4]"] chr3:171733444-chr4:55411614 False 0 Read count too low: 1 < 8 FAIL 1
PLCG2--AAK1 1 0 1.0 0.0 ONLY_REF_SPLICE PLCG2^ENSG00000197943.10 chr16:81786182:+ AAK1^ENSG00000115977.21 chr2:69544544:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:145515850:145525850 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr2]"] chr16:81786182-chr2:69544544 False 0 Read count too low: 1 < 8 FAIL 1
PKN3--SLC7A6 1 0 1.0 0.0 ONLY_REF_SPLICE PKN3^ENSG00000160447.7 chr9:128702939:+ SLC7A6^ENSG00000103064.15 chr16:68266593:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:164566510:164576510 . YES_LDAS 0.1007 GT 1.231 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr16]"] chr9:128702939-chr16:68266593 False 0 Read count too low: 1 < 8 FAIL 1
PKM--MYBL2 1 0 1.0 0.0 INCL_NON_REF_SPLICE PKM^ENSG00000067225.19 chr15:72208749:- MYBL2^ENSG00000101057.16 chr20:43686999:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:115979520:115989520 . YES_LDAS 0.1007 GT 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr20]"] chr15:72208749-chr20:43686999 False 0 Read count too low: 1 < 8 FAIL 1
PIDD1--CHID1 1 0 1.0 0.0 ONLY_REF_SPLICE PIDD1^ENSG00000177595.18 chr11:799815:- CHID1^ENSG00000177830.18 chr11:900110:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:165017300:165027300 . YES_LDAS 0.1007 GT 1.8323 AG 1.5656 ["INTRACHROMOSOMAL[chr11:0.06Mb]","LOCAL_REARRANGEMENT:-:[58106]"] chr11:799815-chr11:900110 False 0 Read count too low: 1 < 8 FAIL 1
PHGDH--WARS2 1 0 1.0 0.0 ONLY_REF_SPLICE PHGDH^ENSG00000092621.13 chr1:119723441:+ WARS2^ENSG00000116874.12 chr1:119034213:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:177953480:177963480 . YES_LDAS 0.1007 GT 1.9086 AG 1.8295 ["INTRACHROMOSOMAL[chr1:0.51Mb]"] chr1:119723441-chr1:119034213 False 0 Read count too low: 1 < 8 FAIL 1
PHF14--FGFR1 1 0 1.0 0.0 ONLY_REF_SPLICE PHF14^ENSG00000106443.17 chr7:11051780:+ FGFR1^ENSG00000077782.21 chr8:38414901:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:131906380:131916380 . YES_LDAS 0.1007 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr8]"] chr7:11051780-chr8:38414901 False 0 Read count too low: 1 < 8 FAIL 1
PHB2--KREMEN2 1 0 1.0 0.0 ONLY_REF_SPLICE PHB2^ENSG00000215021.10 chr12:6970196:- KREMEN2^ENSG00000131650.14 chr16:2966140:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:172103080:172113080 . YES_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr16]"] chr12:6970196-chr16:2966140 False 0 Read count too low: 1 < 8 FAIL 1
PELI1--RGPD5 1 0 0.33 0.0 ONLY_REF_SPLICE PELI1^ENSG00000197329.12 chr2:64108240:- RGPD5^ENSG00000015568.13 chr2:109819696:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:107209310:107219310 . NO_LDAS 0.0332 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr2:45.65Mb]"] chr2:64108240-chr2:109819696 False 0 Read count too low: 1 < 8 FAIL 1
PDIA3--RGS10 1 0 1.0 0.0 ONLY_REF_SPLICE PDIA3^ENSG00000167004.13 chr15:43756766:+ RGS10^ENSG00000148908.15 chr10:119527424:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:173217080:173227080 . YES_LDAS 0.1007 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr10]"] chr15:43756766-chr10:119527424 False 0 Read count too low: 1 < 8 FAIL 1
PCMTD1--BRIP1 1 0 1.0 0.0 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51898930:- BRIP1^ENSG00000136492.9 chr17:61808757:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:192242720:192252720 . YES_LDAS 0.1007 GT 1.6402 AG 1.6729 ["INTERCHROMOSOMAL[chr8--chr17]"] chr8:51898930-chr17:61808757 False 0 Read count too low: 1 < 8 FAIL 1
PAXBP1--GOLGA8A 1 0 1.0 0.0 INCL_NON_REF_SPLICE PAXBP1^ENSG00000159086.15 chr21:32771321:- GOLGA8A^ENSG00000175265.17 chr15:34381856:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:118619470:118629470 . NO_LDAS 0.1007 GT 1.2867 AG 1.8295 ["INTERCHROMOSOMAL[chr21--chr15]"] chr21:32771321-chr15:34381856 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
PAX5--ATXN10 1 0 1.0 0.0 ONLY_REF_SPLICE PAX5^ENSG00000196092.14 chr9:36923355:- ATXN10^ENSG00000130638.17 chr22:45689712:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:118671430:118681430 . YES_LDAS 0.1007 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chr22]"] chr9:36923355-chr22:45689712 False 0 Read count too low: 1 < 8 FAIL 1
PARP14--MPHOSPH9 1 0 1.0 0.0 ONLY_REF_SPLICE PARP14^ENSG00000173193.15 chr3:122720388:+ MPHOSPH9^ENSG00000051825.15 chr12:123181210:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:170432500:170442500 . YES_LDAS 0.1007 GT 1.7465 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr12]"] chr3:122720388-chr12:123181210 False 0 Read count too low: 1 < 8 FAIL 1
P4HB--CCDC57 1 0 1.0 0.0 ONLY_REF_SPLICE P4HB^ENSG00000185624.16 chr17:81859181:- CCDC57^ENSG00000176155.19 chr17:82163357:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:172309400:172319400 . YES_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr17:0.24Mb]"] chr17:81859181-chr17:82163357 False 0 Read count too low: 1 < 8 FAIL 1
OXNAD1--RFTN1 1 0 1.0 0.0 ONLY_REF_SPLICE OXNAD1^ENSG00000154814.14 chr3:16271722:+ RFTN1^ENSG00000131378.14 chr3:16378102:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:128152170:128162170 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS_OVERLAP:+:-:[36725]"] chr3:16271722-chr3:16378102 False 0 Read count too low: 1 < 8 FAIL 1
OTUD6B--PPP2CB 1 0 1.0 0.0 ONLY_REF_SPLICE OTUD6B^ENSG00000155100.11 chr8:91071289:+ PPP2CB^ENSG00000104695.13 chr8:30799755:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:197947560:197957560 . YES_LDAS 0.1007 GT 1.6402 AG 1.7465 ["INTRACHROMOSOMAL[chr8:60.26Mb]"] chr8:91071289-chr8:30799755 False 0 Read count too low: 1 < 8 FAIL 1
OSER1-DT--OSER1 1 0 1.0 0.0 ONLY_REF_SPLICE OSER1-DT^ENSG00000223891.6 chr20:44211356:+ OSER1^ENSG00000132823.11 chr20:44203074:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:132450350:132460350 . YES_LDAS 0.1007 GT 1.5628 AG 1.8892 ["INTRACHROMOSOMAL[chr20:0.00Mb]","LOCAL_INVERSION:+:-:[136]"] chr20:44211356-chr20:44203074 False 0 Read count too low: 1 < 8 FAIL 1
NUSAP1--HHIP 1 0 1.0 0.0 INCL_NON_REF_SPLICE NUSAP1^ENSG00000137804.14 chr15:41365589:+ HHIP^ENSG00000164161.10 chr4:144648424:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:159854370:159864370 . NO_LDAS 0.1007 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr4]"] chr15:41365589-chr4:144648424 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NUP210--KIF5B 1 0 1.0 0.0 ONLY_REF_SPLICE NUP210^ENSG00000132182.12 chr3:13351879:- KIF5B^ENSG00000170759.11 chr10:32037607:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:110183010:110193010 . YES_LDAS 0.1007 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr10]"] chr3:13351879-chr10:32037607 False 0 Read count too low: 1 < 8 FAIL 1
NUCKS1--HS2ST1 1 0 1.0 0.0 ONLY_REF_SPLICE NUCKS1^ENSG00000069275.13 chr1:205749957:- HS2ST1^ENSG00000153936.17 chr1:87072934:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:102398310:102408310 . YES_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr1:118.60Mb]"] chr1:205749957-chr1:87072934 False 0 Read count too low: 1 < 8 FAIL 1
NUB1--ARL14EP 1 0 1.0 0.0 ONLY_REF_SPLICE NUB1^ENSG00000013374.17 chr7:151367968:+ ARL14EP^ENSG00000152219.5 chr11:30336567:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:152796640:152806640 . YES_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr11]"] chr7:151367968-chr11:30336567 False 0 Read count too low: 1 < 8 FAIL 1
NSD1--CANX 1 0 1.0 0.0 ONLY_REF_SPLICE NSD1^ENSG00000165671.21 chr5:177136030:+ CANX^ENSG00000127022.16 chr5:179705679:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:152576240:152586240 . YES_LDAS 0.1007 GT 1.9656 AG 1.7056 ["INTRACHROMOSOMAL[chr5:2.38Mb]"] chr5:177136030-chr5:179705679 False 0 Read count too low: 1 < 8 FAIL 1
NR3C1--ARHGAP26 1 0 1.0 0.0 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143399656:- ARHGAP26^ENSG00000145819.18 chr5:142901935:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:153570440:153580440 . YES_LDAS 0.1007 GT 1.9086 AG 1.5656 ["Klijn_CellLines","INTRACHROMOSOMAL[chr5:0.05Mb]","LOCAL_INVERSION:-:+:[48920]"] chr5:143399656-chr5:142901935 False 0 Read count too low: 1 < 8 FAIL 1
NONO--PHLPP1 1 0 0.25 0.0 INCL_NON_REF_SPLICE NONO^ENSG00000147140.17 chrX:71290778:+ PHLPP1^ENSG00000081913.14 chr18:62979339:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:173147380:173157380 . NO_LDAS 0.0252 GC 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chrX--chr18]"] chrX:71290778-chr18:62979339 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NONO--KAT6A 1 0 0.25 0.0 INCL_NON_REF_SPLICE NONO^ENSG00000147140.17 chrX:71290778:+ KAT6A^ENSG00000083168.11 chr8:41933275:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:173147380:173157380 . NO_LDAS 0.0252 GC 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chrX--chr8]"] chrX:71290778-chr8:41933275 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
NONO--BRD4 1 0 0.25 0.0 INCL_NON_REF_SPLICE NONO^ENSG00000147140.17 chrX:71290778:+ BRD4^ENSG00000141867.19 chr19:15243155:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:173147380:173157380 . NO_LDAS 0.0252 GC 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chrX--chr19]"] chrX:71290778-chr19:15243155 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NEMP2--CHCHD7 1 0 1.0 0.0 ONLY_REF_SPLICE NEMP2^ENSG00000189362.12 chr2:190514453:- CHCHD7^ENSG00000170791.18 chr8:56214598:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:111327500:111337500 . YES_LDAS 0.1007 GT 1.8256 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr8]"] chr2:190514453-chr8:56214598 False 0 Read count too low: 1 < 8 FAIL 1
NDUFS4--ARL15 1 0 1.0 0.0 INCL_NON_REF_SPLICE NDUFS4^ENSG00000164258.12 chr5:53683221:+ ARL15^ENSG00000185305.11 chr5:54171928:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:133443520:133453520 . YES_LDAS 0.1007 GT 1.8295 AG 1.8295 ["INTRACHROMOSOMAL[chr5:0.20Mb]"] chr5:53683221-chr5:54171928 False 0 Read count too low: 1 < 8 FAIL 1
NDUFA9--FGL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE NDUFA9^ENSG00000139180.11 chr12:4659177:+ FGL1^ENSG00000104760.17 chr8:17874576:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:107878670:107888670 . NO_LDAS 0.1007 GT 1.5058 AG 1.2729 ["INTERCHROMOSOMAL[chr12--chr8]"] chr12:4659177-chr8:17874576 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NCOR2--WNT9A 1 0 1.0 0.0 INCL_NON_REF_SPLICE NCOR2^ENSG00000196498.13 chr12:124354093:- WNT9A^ENSG00000143816.8 chr1:227920225:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:106079110:106089110 . NO_LDAS 0.1007 GT 1.7232 AG 1.4256 ["INTERCHROMOSOMAL[chr12--chr1]"] chr12:124354093-chr1:227920225 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NCOA3--CORO1C 1 0 1.0 0.0 ONLY_REF_SPLICE NCOA3^ENSG00000124151.19 chr20:47583261:+ CORO1C^ENSG00000110880.11 chr12:108678394:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:186958120:186968120 . YES_LDAS 0.1007 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr20--chr12]"] chr20:47583261-chr12:108678394 False 0 Read count too low: 1 < 8 FAIL 1
NCK1--STAG1 1 0 1.0 0.0 ONLY_REF_SPLICE NCK1^ENSG00000158092.7 chr3:136928227:+ STAG1^ENSG00000118007.13 chr3:136502779:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:162542750:162552750 . YES_LDAS 0.1007 GT 1.8892 AG 1.9656 ["DEEPEST2019","TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr3:0.11Mb]"] chr3:136928227-chr3:136502779 False 0 Read count too low: 1 < 8 FAIL 1
NAV3--UTP14A 1 0 1.0 0.0 INCL_NON_REF_SPLICE NAV3^ENSG00000067798.16 chr12:78180989:+ UTP14A^ENSG00000156697.13 chrX:129925176:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:136404500:136414500 . NO_LDAS 0.1007 GC 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chrX]"] chr12:78180989-chrX:129925176 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
NAP1L1--KNOP1P4 1 0 1.0 0.0 INCL_NON_REF_SPLICE NAP1L1^ENSG00000187109.15 chr12:76050599:- KNOP1P4^ENSG00000232422.1 chr6:72987288:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:151953130:151963130 . YES_LDAS 0.1007 GT 1.7232 AG 1.5301 ["INTERCHROMOSOMAL[chr12--chr6]"] chr12:76050599-chr6:72987288 False 0 Read count too low: 1 < 8 FAIL 1
NAP1L1--AHR 1 0 1.0 0.0 ONLY_REF_SPLICE NAP1L1^ENSG00000187109.15 chr12:76084567:- AHR^ENSG00000106546.14 chr7:17309936:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:194326640:194336640 . YES_LDAS 0.1007 GT 1.9219 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr7]"] chr12:76084567-chr7:17309936 False 0 Read count too low: 1 < 8 FAIL 1
NADSYN1--AQR 1 0 1.0 0.0 ONLY_REF_SPLICE NADSYN1^ENSG00000172890.13 chr11:71464142:+ AQR^ENSG00000021776.11 chr15:34896966:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:158575040:158585040 . YES_LDAS 0.1007 GT 1.7232 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr15]"] chr11:71464142-chr15:34896966 False 0 Read count too low: 1 < 8 FAIL 1
MYO1C--SLC25A39 1 0 1.0 0.0 ONLY_REF_SPLICE MYO1C^ENSG00000197879.17 chr17:1467242:- SLC25A39^ENSG00000013306.16 chr17:44321767:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:103855000:103865000 . NO_LDAS 0.1007 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr17:42.83Mb]"] chr17:1467242-chr17:44321767 False 0 Read count too low: 1 < 8 FAIL 1
MYCBP2--RARS1 1 0 1.0 0.0 ONLY_REF_SPLICE MYCBP2^ENSG00000005810.18 chr13:77181701:- RARS1^ENSG00000113643.9 chr5:168493894:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:127713110:127723110 . YES_LDAS 0.1007 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr13--chr5]"] chr13:77181701-chr5:168493894 False 0 Read count too low: 1 < 8 FAIL 1
MX2--DDB2 1 0 1.0 0.0 ONLY_REF_SPLICE MX2^ENSG00000183486.14 chr21:41382564:+ DDB2^ENSG00000134574.12 chr11:47216336:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:144493140:144503140 . YES_LDAS 0.1007 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr21--chr11]"] chr21:41382564-chr11:47216336 False 0 Read count too low: 1 < 8 FAIL 1
MSN--ZNF319 1 0 1.0 0.0 INCL_NON_REF_SPLICE MSN^ENSG00000147065.17 chrX:65740726:+ ZNF319^ENSG00000166188.3 chr16:57997500:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:123755310:123765310 . YES_LDAS 0.1007 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr16]"] chrX:65740726-chr16:57997500 False 0 Read count too low: 1 < 8 FAIL 1
MSI2--KMT2C 1 0 1.0 0.0 ONLY_REF_SPLICE MSI2^ENSG00000153944.12 chr17:57262192:+ KMT2C^ENSG00000055609.20 chr7:152238826:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:158151370:158161370 . YES_LDAS 0.1007 GT 1.5656 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr7]"] chr17:57262192-chr7:152238826 False 0 Read count too low: 1 < 8 FAIL 1
MRPL30--HNRNPC 1 0 1.0 0.0 ONLY_REF_SPLICE MRPL30^ENSG00000185414.20 chr2:99181249:+ HNRNPC^ENSG00000092199.18 chr14:21234229:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:127625420:127635420 . YES_LDAS 0.1007 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr14]"] chr2:99181249-chr14:21234229 False 0 Read count too low: 1 < 8 FAIL 1
MMS19--TFG 1 0 1.0 0.0 ONLY_REF_SPLICE MMS19^ENSG00000155229.21 chr10:97498273:- TFG^ENSG00000114354.15 chr3:100728712:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:199900840:199910840 . YES_LDAS 0.1007 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr3]"] chr10:97498273-chr3:100728712 False 0 Read count too low: 1 < 8 FAIL 1
MKRN1--NCOR2 1 0 1.0 0.0 ONLY_REF_SPLICE MKRN1^ENSG00000133606.11 chr7:140479160:- NCOR2^ENSG00000196498.13 chr12:124457162:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:124327650:124337650 . YES_LDAS 0.1007 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr12]"] chr7:140479160-chr12:124457162 False 0 Read count too low: 1 < 8 FAIL 1
MIB1--VAPA 1 0 1.0 0.0 ONLY_REF_SPLICE MIB1^ENSG00000101752.12 chr18:21741812:+ VAPA^ENSG00000101558.14 chr18:9931810:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:121092280:121102280 . YES_LDAS 0.1007 GT 1.4566 AG 1.9219 ["INTRACHROMOSOMAL[chr18:11.74Mb]"] chr18:21741812-chr18:9931810 False 0 Read count too low: 1 < 8 FAIL 1
MGAT4A--ASXL1 1 0 1.0 0.0 ONLY_REF_SPLICE MGAT4A^ENSG00000071073.13 chr2:98726239:- ASXL1^ENSG00000171456.20 chr20:32366384:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:122929070:122939070 . YES_LDAS 0.1007 GT 1.5628 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr20]"] chr2:98726239-chr20:32366384 False 0 Read count too low: 1 < 8 FAIL 1
MFN2--TNFRSF8 1 0 1.0 0.0 ONLY_REF_SPLICE MFN2^ENSG00000116688.18 chr1:11982114:+ TNFRSF8^ENSG00000120949.15 chr1:12135588:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:198480280:198490280 . YES_LDAS 0.1007 GT 1.3996 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.05Mb]","NEIGHBORS[48092]"] chr1:11982114-chr1:12135588 False 0 Read count too low: 1 < 8 FAIL 1
MED26--AC241585.1 1 0 0.5 0.0 INCL_NON_REF_SPLICE MED26^ENSG00000105085.11 chr19:16627872:- AC241585.1^ENSG00000223612.3 chr1:145233055:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:115724040:115734040 . YES_LDAS 0.0503 GT 1.5058 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:16627872-chr1:145233055 False 0 Read count too low: 1 < 8 FAIL 1
MCOLN2--AC083837.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE MCOLN2^ENSG00000153898.13 chr1:84937755:- AC083837.1^ENSG00000285744.1 chr8:78805212:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:142770810:142780810 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr8]"] chr1:84937755-chr8:78805212 False 0 Read count too low: 1 < 8 FAIL 1
MAVS--RPS9 1 0 1.0 0.0 ONLY_REF_SPLICE MAVS^ENSG00000088888.18 chr20:3846903:+ RPS9^ENSG00000170889.14 chr19:54201160:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:170690840:170700840 . YES_LDAS 0.1007 GT 1.6895 AG 1.4566 ["INTERCHROMOSOMAL[chr20--chr19]"] chr20:3846903-chr19:54201160 False 0 Read count too low: 1 < 8 FAIL 1
MATR3--PDS5A 1 0 1.0 0.0 ONLY_REF_SPLICE MATR3^ENSG00000280987.4 chr5:139279129:+ PDS5A^ENSG00000121892.15 chr4:39825488:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:179860720:179870720 . YES_LDAS 0.1007 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr4]"] chr5:139279129-chr4:39825488 False 0 Read count too low: 1 < 8 FAIL 1
MAST2--AK2 1 0 1.0 0.0 ONLY_REF_SPLICE MAST2^ENSG00000086015.22 chr1:45829581:+ AK2^ENSG00000004455.17 chr1:33014594:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:173778520:173788520 . YES_LDAS 0.1007 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr1:12.71Mb]"] chr1:45829581-chr1:33014594 False 0 Read count too low: 1 < 8 FAIL 1
MAP3K5--DOCK2 1 0 1.0 0.0 ONLY_REF_SPLICE MAP3K5^ENSG00000197442.10 chr6:136705110:- DOCK2^ENSG00000134516.18 chr5:170047510:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:171995760:172005760 . NO_LDAS 0.1007 GT 1.9219 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr5]"] chr6:136705110-chr5:170047510 False 0 Read count too low: 1 < 8 FAIL 1
MAGEE1--CARD11 1 0 1.0 0.0 INCL_NON_REF_SPLICE MAGEE1^ENSG00000198934.5 chrX:76430888:+ CARD11^ENSG00000198286.10 chr7:2918720:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:161778140:161788140 . NO_LDAS 0.1007 AT 1.3753 AC 1.8062 ["INTERCHROMOSOMAL[chrX--chr7]"] chrX:76430888-chr7:2918720 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
MAGED1--MTMR8 1 0 1.0 0.0 ONLY_REF_SPLICE MAGED1^ENSG00000179222.18 chrX:51803117:+ MTMR8^ENSG00000102043.16 chrX:64356338:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:186065760:186075760 . YES_LDAS 0.1007 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chrX:12.37Mb]"] chrX:51803117-chrX:64356338 False 0 Read count too low: 1 < 8 FAIL 1
MAEA--CERS5 1 0 1.0 0.0 INCL_NON_REF_SPLICE MAEA^ENSG00000090316.16 chr4:1339289:+ CERS5^ENSG00000139624.14 chr12:50130437:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:119642450:119652450 . YES_LDAS 0.1007 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr12]"] chr4:1339289-chr12:50130437 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNVU1-7 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNVU1-7^ENSG00000206585.1 chr1:148038901:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:108.55Mb]"] chr1:39285202-chr1:148038901 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNVU1-29 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNVU1-29^ENSG00000273768.1 chr1:146376822:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:106.89Mb]"] chr1:39285202-chr1:146376822 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNVU1-28 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNVU1-28^ENSG00000277918.1 chr1:144560814:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:105.07Mb]"] chr1:39285202-chr1:144560814 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNVU1-18 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNVU1-18^ENSG00000206737.1 chr1:143729555:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:104.24Mb]"] chr1:39285202-chr1:143729555 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNU1-4 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNU1-4^ENSG00000207389.1 chr1:16740531:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:22.34Mb]"] chr1:39285202-chr1:16740531 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNU1-3 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNU1-3^ENSG00000207513.1 chr1:16666933:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:22.41Mb]"] chr1:39285202-chr1:16666933 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNU1-28P 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNU1-28P^ENSG00000206588.1 chr14:34556374:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr14]"] chr1:39285202-chr14:34556374 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNU1-27P 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNU1-27P^ENSG00000206596.1 chr14:34546729:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr14]"] chr1:39285202-chr14:34546729 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNU1-2 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNU1-2^ENSG00000207005.1 chr1:16895995:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:22.19Mb]"] chr1:39285202-chr1:16895995 False 0 Read count too low: 1 < 8 FAIL 1
MACF1--RNU1-1 1 0 0.1 0.0 INCL_NON_REF_SPLICE MACF1^ENSG00000127603.30 chr1:39285202:+ RNU1-1^ENSG00000206652.1 chr1:16514270:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135984990:135994990 . YES_LDAS 0.0101 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:22.57Mb]"] chr1:39285202-chr1:16514270 False 0 Read count too low: 1 < 8 FAIL 1
LZTFL1--NCL 1 0 1.0 0.0 INCL_NON_REF_SPLICE LZTFL1^ENSG00000163818.18 chr3:45832971:- NCL^ENSG00000115053.17 chr2:231460293:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:185547400:185557400 . NO_LDAS 0.1007 GT 1.5329 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr2]"] chr3:45832971-chr2:231460293 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LRRC28--CDK17 1 0 1.0 0.0 ONLY_REF_SPLICE LRRC28^ENSG00000168904.15 chr15:99287951:+ CDK17^ENSG00000059758.8 chr12:96286761:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:104691980:104701980 . YES_LDAS 0.1007 GT 1.8062 AG 1.5628 ["INTERCHROMOSOMAL[chr15--chr12]"] chr15:99287951-chr12:96286761 False 0 Read count too low: 1 < 8 FAIL 1
LRP4-AS1--UBE3C 1 0 1.0 0.0 ONLY_REF_SPLICE LRP4-AS1^ENSG00000247675.7 chr11:46852946:+ UBE3C^ENSG00000009335.18 chr7:157256914:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:134917300:134927300 . NO_LDAS 0.1007 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr7]"] chr11:46852946-chr7:157256914 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LMNB1--RNASEH1 1 0 1.0 0.0 ONLY_REF_SPLICE LMNB1^ENSG00000113368.12 chr5:126777867:+ RNASEH1^ENSG00000171865.10 chr2:3552308:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:120961290:120971290 . YES_LDAS 0.1007 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr2]"] chr5:126777867-chr2:3552308 False 0 Read count too low: 1 < 8 FAIL 1
LINC02068--SAE1 1 0 1.0 0.0 ONLY_REF_SPLICE LINC02068^ENSG00000223387.6 chr3:172595403:- SAE1^ENSG00000142230.13 chr19:47169818:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:104226070:104236070 . YES_LDAS 0.1007 GT 1.5058 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr19]"] chr3:172595403-chr19:47169818 False 0 Read count too low: 1 < 8 FAIL 1
LINC-PINT--CHCHD3 1 0 1.0 0.0 ONLY_REF_SPLICE LINC-PINT^ENSG00000231721.7 chr7:130945720:- CHCHD3^ENSG00000106554.13 chr7:133070229:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:116933330:116943330 . YES_LDAS 0.1007 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr7:1.67Mb]"] chr7:130945720-chr7:133070229 False 0 Read count too low: 1 < 8 FAIL 1
LILRB1--LILRA5 1 0 1.0 0.0 ONLY_REF_SPLICE LILRB1^ENSG00000104972.15 chr19:54631107:+ LILRA5^ENSG00000187116.14 chr19:54312370:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:142751450:142761450 . YES_LDAS 0.1007 GT 1.7819 AG 1.7465 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.30Mb]"] chr19:54631107-chr19:54312370 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
LDHC--LDHA 1 0 1.0 0.0 ONLY_REF_SPLICE LDHC^ENSG00000166796.12 chr11:18446333:+ LDHA^ENSG00000134333.14 chr11:18407117:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:156999760:157009760 . NO_LDAS 0.1007 GT 1.9899 AG 1.9329 ["INTRACHROMOSOMAL[chr11:0.00Mb]","LOCAL_REARRANGEMENT:+:[3893]"] chr11:18446333-chr11:18407117 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
LCLAT1--BRAF 1 0 1.0 0.0 ONLY_REF_SPLICE LCLAT1^ENSG00000172954.14 chr2:30533314:+ BRAF^ENSG00000157764.14 chr7:140850212:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:185263360:185273360 . YES_LDAS 0.1007 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr7]"] chr2:30533314-chr7:140850212 False 0 Read count too low: 1 < 8 FAIL 1
LATS1--AC108676.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE LATS1^ENSG00000131023.13 chr6:149676260:- AC108676.1^ENSG00000244675.2 chr3:194498446:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:188807160:188817160 . NO_LDAS 0.1007 GT 1.5546 AG 1.5656 ["INTERCHROMOSOMAL[chr6--chr3]"] chr6:149676260-chr3:194498446 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
LAPTM5--BMI1 1 0 1.0 0.0 ONLY_REF_SPLICE LAPTM5^ENSG00000162511.8 chr1:30757659:- BMI1^ENSG00000168283.14 chr10:22326431:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:116089750:116099750 . YES_LDAS 0.1007 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr10]"] chr1:30757659-chr10:22326431 False 0 Read count too low: 1 < 8 FAIL 1
KRBA2--ZNF106 1 0 1.0 0.0 INCL_NON_REF_SPLICE KRBA2^ENSG00000184619.8 chr17:8369787:- ZNF106^ENSG00000103994.18 chr15:42446658:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:155537460:155547460 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr15]"] chr17:8369787-chr15:42446658 False 0 Read count too low: 1 < 8 FAIL 1
KIFC1--LINC02384 1 0 1.0 0.0 INCL_NON_REF_SPLICE KIFC1^ENSG00000237649.8 chr6:33398387:+ LINC02384^ENSG00000251301.7 chr12:68441949:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:171303720:171313720 . NO_LDAS 0.1007 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr12]"] chr6:33398387-chr12:68441949 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KIFC1--ADAM20 1 0 1.0 0.0 INCL_NON_REF_SPLICE KIFC1^ENSG00000237649.8 chr6:33409752:+ ADAM20^ENSG00000134007.5 chr14:70523692:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:155993150:156003150 . NO_LDAS 0.1007 GT 0.9968 AG 1.5329 ["INTERCHROMOSOMAL[chr6--chr14]"] chr6:33409752-chr14:70523692 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KIF11--SUPT20H 1 0 1.0 0.0 ONLY_REF_SPLICE KIF11^ENSG00000138160.7 chr10:92616832:+ SUPT20H^ENSG00000102710.20 chr13:37024442:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:140396050:140406050 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr13]"] chr10:92616832-chr13:37024442 False 0 Read count too low: 1 < 8 FAIL 1
KIAA0100--FTSJ3 1 0 1.0 0.0 ONLY_REF_SPLICE KIAA0100^ENSG00000007202.15 chr17:28618791:- FTSJ3^ENSG00000108592.17 chr17:63822168:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:166061330:166071330 . NO_LDAS 0.1007 GT 1.9329 AG 1.5656 ["INTRACHROMOSOMAL[chr17:35.17Mb]"] chr17:28618791-chr17:63822168 False 0 Read count too low: 1 < 8 FAIL 1
KEAP1--KLHL1 1 0 0.5 0.0 INCL_NON_REF_SPLICE KEAP1^ENSG00000079999.14 chr19:10491573:- KLHL1^ENSG00000150361.12 chr13:69961382:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:147092540:147102540 . NO_LDAS 0.0503 GT 1.4566 AG 1.5058 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr13]"] chr19:10491573-chr13:69961382 False 0 Excluded annotation pattern: HGNC_GENEFAM FAIL 1
KEAP1--AC069209.2 1 0 0.5 0.0 INCL_NON_REF_SPLICE KEAP1^ENSG00000079999.14 chr19:10491573:- AC069209.2^ENSG00000286248.1 chr12:121191377:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:147092540:147102540 . NO_LDAS 0.0503 GT 1.4566 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr12]"] chr19:10491573-chr12:121191377 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
KDM1A--RPS17 1 0 1.0 0.0 INCL_NON_REF_SPLICE KDM1A^ENSG00000004487.17 chr1:23079609:+ RPS17^ENSG00000182774.13 chr15:82540083:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:152305950:152315950 . YES_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr15]"] chr1:23079609-chr15:82540083 False 0 Read count too low: 1 < 8 FAIL 1
KCND2--ABCC4 1 0 1.0 0.0 ONLY_REF_SPLICE KCND2^ENSG00000184408.10 chr7:120275747:+ ABCC4^ENSG00000125257.16 chr13:95186892:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:194115960:194125960 . YES_LDAS 0.1007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr13]"] chr7:120275747-chr13:95186892 False 0 Read count too low: 1 < 8 FAIL 1
KCNAB2--RPL22 1 0 1.0 0.0 ONLY_REF_SPLICE KCNAB2^ENSG00000069424.15 chr1:6040645:+ RPL22^ENSG00000116251.11 chr1:6197756:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:117071480:117081480 . YES_LDAS 0.1007 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr1:0.08Mb]","LOCAL_INVERSION:+:-:[83827]"] chr1:6040645-chr1:6197756 True read_through|ribosomal genes|RPL22 0 Blacklisted FAIL 1
KATNIP--NBEAL1 1 0 0.25 0.0 INCL_NON_REF_SPLICE KATNIP^ENSG00000047578.13 chr16:27740406:+ NBEAL1^ENSG00000144426.18 chr2:203190990:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:116216980:116226980 . YES_LDAS 0.0252 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr2]"] chr16:27740406-chr2:203190990 False 0 Read count too low: 1 < 8 FAIL 1
KAT2B--WDR33 1 0 1.0 0.0 ONLY_REF_SPLICE KAT2B^ENSG00000114166.8 chr3:20072459:+ WDR33^ENSG00000136709.12 chr2:127771004:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:122657980:122667980 . YES_LDAS 0.1007 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr2]"] chr3:20072459-chr2:127771004 False 0 Read count too low: 1 < 8 FAIL 1
ITIH4--PRKCD 1 0 1.0 0.0 ONLY_REF_SPLICE ITIH4^ENSG00000055955.17 chr3:52823556:- PRKCD^ENSG00000163932.15 chr3:53192108:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:137510500:137520500 . YES_LDAS 0.1007 GT 1.8295 AG 1.7819 ["INTRACHROMOSOMAL[chr3:0.33Mb]"] chr3:52823556-chr3:53192108 False 0 Read count too low: 1 < 8 FAIL 1
ITGA4--FUS 1 0 1.0 0.0 ONLY_REF_SPLICE ITGA4^ENSG00000115232.14 chr2:181485992:+ FUS^ENSG00000089280.19 chr16:31189123:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:109072980:109082980 . NO_LDAS 0.1007 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr16]"] chr2:181485992-chr16:31189123 False 0 Read count too low: 1 < 8 FAIL 1
IQGAP3--GBA 1 0 0.5 0.0 ONLY_REF_SPLICE IQGAP3^ENSG00000183856.11 chr1:156569376:- GBA^ENSG00000177628.16 chr1:155237578:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:156072240:156082240 . YES_LDAS 0.0503 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr1:1.28Mb]"] chr1:156569376-chr1:155237578 False 0 Read count too low: 1 < 8 FAIL 1
INTS1--HDAC4-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE INTS1^ENSG00000164880.16 chr7:1473072:- HDAC4-AS1^ENSG00000222020.3 chr2:239402075:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:128636980:128646980 . YES_LDAS 0.1007 GT 1.3996 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr2]"] chr7:1473072-chr2:239402075 False 0 Read count too low: 1 < 8 FAIL 1
INPP4A--CCDC14 1 0 1.0 0.0 ONLY_REF_SPLICE INPP4A^ENSG00000040933.16 chr2:98577143:+ CCDC14^ENSG00000175455.16 chr3:123949132:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:178167700:178177700 . YES_LDAS 0.1007 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr3]"] chr2:98577143-chr3:123949132 False 0 Read count too low: 1 < 8 FAIL 1
IL18BP--HAUS5 1 0 1.0 0.0 INCL_NON_REF_SPLICE IL18BP^ENSG00000137496.18 chr11:72000519:+ HAUS5^ENSG00000249115.9 chr19:35619850:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:179980120:179990120 . NO_LDAS 0.1007 AT 1.9899 AC 1.8295 ["INTERCHROMOSOMAL[chr11--chr19]"] chr11:72000519-chr19:35619850 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
IKBKG--ZNF800 1 0 1.0 0.0 INCL_NON_REF_SPLICE IKBKG^ENSG00000269335.6 chrX:154542452:+ ZNF800^ENSG00000048405.10 chr7:127373479:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:115233390:115243390 . YES_LDAS 0.1007 GT 1.8295 AG 1.8062 ["INTERCHROMOSOMAL[chrX--chr7]"] chrX:154542452-chr7:127373479 False 0 Read count too low: 1 < 8 FAIL 1
IGF2R--SFPQ 1 0 1.0 0.0 ONLY_REF_SPLICE IGF2R^ENSG00000197081.16 chr6:160090103:+ SFPQ^ENSG00000116560.11 chr1:35191529:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:159338690:159348690 . YES_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr1]"] chr6:160090103-chr1:35191529 False 0 Read count too low: 1 < 8 FAIL 1
HYOU1--COL9A2 1 0 1.0 0.0 INCL_NON_REF_SPLICE HYOU1^ENSG00000149428.19 chr11:119052295:- COL9A2^ENSG00000049089.15 chr1:40309985:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:106762600:106772600 . YES_LDAS 0.1007 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr1]"] chr11:119052295-chr1:40309985 False 0 Read count too low: 1 < 8 FAIL 1
HSP90AA1--TSC2 1 0 1.0 0.0 ONLY_REF_SPLICE HSP90AA1^ENSG00000080824.19 chr14:102083034:- TSC2^ENSG00000103197.18 chr16:2070456:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:187534920:187544920 . YES_LDAS 0.1007 GT 1.2419 AG 1.8323 ["INTERCHROMOSOMAL[chr14--chr16]"] chr14:102083034-chr16:2070456 False 0 Read count too low: 1 < 8 FAIL 1
HSP90AA1--IL1R1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HSP90AA1^ENSG00000080824.19 chr14:102082111:- IL1R1^ENSG00000115594.12 chr2:102171876:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:143507000:143517000 . NO_LDAS 0.1007 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr2]"] chr14:102082111-chr2:102171876 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HS2ST1--GPBP1 1 0 1.0 0.0 ONLY_REF_SPLICE HS2ST1^ENSG00000153936.17 chr1:86915160:+ GPBP1^ENSG00000062194.16 chr5:57246300:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:125836060:125846060 . NO_LDAS 0.1007 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr5]"] chr1:86915160-chr5:57246300 False 0 Read count too low: 1 < 8 FAIL 1
HNRNPA2B1--BRD4 1 0 1.0 0.0 ONLY_REF_SPLICE HNRNPA2B1^ENSG00000122566.22 chr7:26200572:- BRD4^ENSG00000141867.19 chr19:15273133:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:184110460:184120460 . YES_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr19]"] chr7:26200572-chr19:15273133 False 0 Read count too low: 1 < 8 FAIL 1
HNRNPA1P12--HNRNPA2B1 1 0 1.0 0.0 INCL_NON_REF_SPLICE HNRNPA1P12^ENSG00000220157.4 chr5:80359908:- HNRNPA2B1^ENSG00000122566.22 chr7:26197461:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:114378740:114388740 . NO_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr7]"] chr5:80359908-chr7:26197461 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HLA-DQA1--ZFAS1 1 0 1.0 0.0 ONLY_REF_SPLICE HLA-DQA1^ENSG00000196735.13 chr6:32642784:+ ZFAS1^ENSG00000177410.13 chr20:49289045:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:175872040:175882040 . YES_LDAS 0.1007 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr20]"] chr6:32642784-chr20:49289045 False 0 Read count too low: 1 < 8 FAIL 1
HLA-C--MUC16 1 0 1.0 0.0 INCL_NON_REF_SPLICE HLA-C^ENSG00000204525.17 chr6:31269489:- MUC16^ENSG00000181143.15 chr19:8848985:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:155944090:155954090 . NO_LDAS 0.1007 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr6--chr19]"] chr6:31269489-chr19:8848985 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
HIVEP1--B3GNT2 1 0 1.0 0.0 ONLY_REF_SPLICE HIVEP1^ENSG00000095951.17 chr6:12012566:+ B3GNT2^ENSG00000170340.11 chr2:62222212:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:192129140:192139140 . YES_LDAS 0.1007 GT 1.8323 AG 1.5301 ["INTERCHROMOSOMAL[chr6--chr2]"] chr6:12012566-chr2:62222212 False 0 Read count too low: 1 < 8 FAIL 1
HIPK2--CAMK1G 1 0 0.25 0.0 INCL_NON_REF_SPLICE HIPK2^ENSG00000064393.16 chr7:139715932:- CAMK1G^ENSG00000008118.10 chr1:209611923:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:129719180:129729180 . NO_LDAS 0.0252 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr1]"] chr7:139715932-chr1:209611923 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
HINT1--DDX18 1 0 1.0 0.0 ONLY_REF_SPLICE HINT1^ENSG00000169567.13 chr5:131162362:- DDX18^ENSG00000088205.13 chr2:117830582:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:182835760:182845760 . YES_LDAS 0.1007 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr2]"] chr5:131162362-chr2:117830582 False 0 Read count too low: 1 < 8 FAIL 1
HEATR1--RO60 1 0 1.0 0.0 ONLY_REF_SPLICE HEATR1^ENSG00000119285.11 chr1:236565919:- RO60^ENSG00000116747.13 chr1:193075820:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:132134220:132144220 . YES_LDAS 0.1007 GT 1.231 AG 1.9329 ["INTRACHROMOSOMAL[chr1:43.46Mb]"] chr1:236565919-chr1:193075820 False 0 Read count too low: 1 < 8 FAIL 1
HDX--PLS3 1 0 1.0 0.0 ONLY_REF_SPLICE HDX^ENSG00000165259.14 chrX:84502342:- PLS3^ENSG00000102024.18 chrX:115610243:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:143330910:143340910 . YES_LDAS 0.1007 GT 1.4566 AG 1.7819 ["INTRACHROMOSOMAL[chrX:31.06Mb]"] chrX:84502342-chrX:115610243 False 0 Read count too low: 1 < 8 FAIL 1
HDLBP--MTERF4 1 0 1.0 0.0 ONLY_REF_SPLICE HDLBP^ENSG00000115677.17 chr2:241315570:- MTERF4^ENSG00000122085.17 chr2:241097427:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:187810560:187820560 . YES_LDAS 0.1007 GT 1.6895 AG 1.4295 ["INTRACHROMOSOMAL[chr2:0.12Mb]"] chr2:241315570-chr2:241097427 False 0 Read count too low: 1 < 8 FAIL 1
H2AZ1--H2AZ2 1 0 0.5 0.0 ONLY_REF_SPLICE H2AZ1^ENSG00000164032.12 chr4:99949273:- H2AZ2^ENSG00000105968.19 chr7:44835658:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:108950080:108960080 . NO_LDAS 0.0503 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr7]"] chr4:99949273-chr7:44835658 False 0 Read count too low: 1 < 8 FAIL 1
GRK3--DENND1A 1 0 1.0 0.0 ONLY_REF_SPLICE GRK3^ENSG00000100077.15 chr22:25565153:+ DENND1A^ENSG00000119522.16 chr9:123440491:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:126963610:126973610 . YES_LDAS 0.1007 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr9]"] chr22:25565153-chr9:123440491 False 0 Read count too low: 1 < 8 FAIL 1
GRHPR--ZCCHC7 1 0 1.0 0.0 ONLY_REF_SPLICE GRHPR^ENSG00000137106.18 chr9:37422833:+ ZCCHC7^ENSG00000147905.18 chr9:37349357:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:181640920:181650920 . YES_LDAS 0.1007 GT 1.4295 AG 1.7056 ["INTRACHROMOSOMAL[chr9:0.06Mb]","LOCAL_REARRANGEMENT:+:[64517]"] chr9:37422833-chr9:37349357 False 0 Read count too low: 1 < 8 FAIL 1
GNA12--RPS6KA3 1 0 1.0 0.0 ONLY_REF_SPLICE GNA12^ENSG00000146535.14 chr7:2794928:- RPS6KA3^ENSG00000177189.14 chrX:20156249:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:197235580:197245580 . YES_LDAS 0.1007 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chrX]"] chr7:2794928-chrX:20156249 False 0 Read count too low: 1 < 8 FAIL 1
FUS--RALGAPA1 1 0 0.5 0.0 ONLY_REF_SPLICE FUS^ENSG00000089280.19 chr16:31185179:+ RALGAPA1^ENSG00000174373.17 chr14:35742565:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:142260980:142270980 . YES_LDAS 0.0503 GT 1.7232 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr14]"] chr16:31185179-chr14:35742565 False 0 Read count too low: 1 < 8 FAIL 1
FUS--CTNNA1 1 0 1.0 0.0 INCL_NON_REF_SPLICE FUS^ENSG00000089280.19 chr16:31184352:+ CTNNA1^ENSG00000044115.21 chr5:138934073:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:146554980:146564980 . NO_LDAS 0.1007 GT 1.8062 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr5]"] chr16:31184352-chr5:138934073 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FRMPD3--EIF2B3 1 0 1.0 0.0 INCL_NON_REF_SPLICE FRMPD3^ENSG00000147234.10 chrX:107604311:+ EIF2B3^ENSG00000070785.17 chr1:44941592:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:101558390:101568390 . NO_LDAS 0.1007 GT 1.1589 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr1]"] chrX:107604311-chr1:44941592 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FNIP1--RAPGEF6 1 0 1.0 0.0 ONLY_REF_SPLICE FNIP1^ENSG00000217128.12 chr5:131796830:- RAPGEF6^ENSG00000158987.22 chr5:131521521:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:181100880:181110880 . YES_LDAS 0.1007 GT 1.8892 AG 1.8323 ["Klijn_CellLines","ConjoinG","INTRACHROMOSOMAL[chr5:0.01Mb]","NEIGHBORS[6483]"] chr5:131796830-chr5:131521521 False 0 Excluded annotation pattern: ConjoinG FAIL 1
FMNL3--XCL1 1 0 1.0 0.0 INCL_NON_REF_SPLICE FMNL3^ENSG00000161791.14 chr12:49653795:- XCL1^ENSG00000143184.5 chr1:168581249:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:198648600:198658600 . YES_LDAS 0.1007 GT 1.5628 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr1]"] chr12:49653795-chr1:168581249 False 0 Read count too low: 1 < 8 FAIL 1
FLNB--FLNA 1 0 1.0 0.0 ONLY_REF_SPLICE FLNB^ENSG00000136068.15 chr3:58097977:+ FLNA^ENSG00000196924.19 chrX:154366224:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:120910770:120920770 . YES_LDAS 0.1007 GT 1.9656 AG 1.6402 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr3--chrX]"] chr3:58097977-chrX:154366224 False 0 Excluded annotation pattern: GTEx_recurrent_StarF2019 FAIL 1
FKBP3--NCBP2 1 0 1.0 0.0 ONLY_REF_SPLICE FKBP3^ENSG00000100442.11 chr14:45134349:- NCBP2^ENSG00000114503.11 chr3:196939432:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:126955870:126965870 . NO_LDAS 0.1007 GT 1.9899 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr3]"] chr14:45134349-chr3:196939432 False 0 Read count too low: 1 < 8 FAIL 1
FIG4--CDK6 1 0 1.0 0.0 ONLY_REF_SPLICE FIG4^ENSG00000112367.12 chr6:109691501:+ CDK6^ENSG00000105810.10 chr7:92774831:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:146794300:146804300 . YES_LDAS 0.1007 GT 1.9329 AG 1.2729 ["INTERCHROMOSOMAL[chr6--chr7]"] chr6:109691501-chr7:92774831 False 0 Read count too low: 1 < 8 FAIL 1
FHOD3--SLC39A6 1 0 1.0 0.0 ONLY_REF_SPLICE FHOD3^ENSG00000134775.15 chr18:36576545:+ SLC39A6^ENSG00000141424.13 chr18:36116779:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:162628900:162638900 . YES_LDAS 0.1007 GT 1.9899 AG 1.7232 ["INTRACHROMOSOMAL[chr18:0.17Mb]"] chr18:36576545-chr18:36116779 False 0 Read count too low: 1 < 8 FAIL 1
FGGY--C11orf80 1 0 1.0 0.0 INCL_NON_REF_SPLICE FGGY^ENSG00000172456.18 chr1:59346398:+ C11orf80^ENSG00000173715.18 chr11:66815758:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:143577770:143587770 . NO_LDAS 0.1007 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr11]"] chr1:59346398-chr11:66815758 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
FER--VPS4A 1 0 1.0 0.0 INCL_NON_REF_SPLICE FER^ENSG00000151422.13 chr5:109195891:+ VPS4A^ENSG00000132612.16 chr16:69321182:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:100169730:100179730 . YES_LDAS 0.1007 GT 1.6895 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr16]"] chr5:109195891-chr16:69321182 False 0 Read count too low: 1 < 8 FAIL 1
FCER2--PARP14 1 0 1.0 0.0 ONLY_REF_SPLICE FCER2^ENSG00000104921.15 chr19:7697236:- PARP14^ENSG00000173193.15 chr3:122713424:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:149493140:149503140 . YES_LDAS 0.1007 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr3]"] chr19:7697236-chr3:122713424 False 0 Read count too low: 1 < 8 FAIL 1
FBH1--DST 1 0 1.0 0.0 ONLY_REF_SPLICE FBH1^ENSG00000134452.20 chr10:5924508:+ DST^ENSG00000151914.21 chr6:56614484:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:136552050:136562050 . YES_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr6]"] chr10:5924508-chr6:56614484 False 0 Read count too low: 1 < 8 FAIL 1
FASTKD3--MARCHF6 1 0 1.0 0.0 ONLY_REF_SPLICE FASTKD3^ENSG00000124279.12 chr5:7868979:- MARCHF6^ENSG00000145495.16 chr5:10433594:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:135048410:135058410 . YES_LDAS 0.1007 GT 1.4295 AG 1.9086 ["INTRACHROMOSOMAL[chr5:2.48Mb]"] chr5:7868979-chr5:10433594 False 0 Read count too low: 1 < 8 FAIL 1
FAM27C--SLC41A2 1 0 1.0 0.0 ONLY_REF_SPLICE FAM27C^ENSG00000231527.7 chr9:61856814:+ SLC41A2^ENSG00000136052.9 chr12:104845974:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:139525070:139535070 . YES_LDAS 0.1007 GT 1.5329 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chr12]"] chr9:61856814-chr12:104845974 False 0 Read count too low: 1 < 8 FAIL 1
FAM193B--STAT5B 1 0 1.0 0.0 INCL_NON_REF_SPLICE FAM193B^ENSG00000146067.16 chr5:177554489:- STAT5B^ENSG00000173757.10 chr17:42201805:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:151630960:151640960 . NO_LDAS 0.1007 GT 1.231 AG 1.5546 ["INTERCHROMOSOMAL[chr5--chr17]"] chr5:177554489-chr17:42201805 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
FABP5--KDM5D 1 0 1.0 0.0 ONLY_REF_SPLICE FABP5^ENSG00000164687.11 chr8:81280674:+ KDM5D^ENSG00000012817.16 chrY:19710472:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:149844280:149854280 . NO_LDAS 0.1007 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chrY]"] chr8:81280674-chrY:19710472 False 0 Read count too low: 1 < 8 FAIL 1
ESF1--TASP1 1 0 1.0 0.0 ONLY_REF_SPLICE ESF1^ENSG00000089048.15 chr20:13782504:- TASP1^ENSG00000089123.16 chr20:13483337:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:191926100:191936100 . YES_LDAS 0.1007 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr20:0.08Mb]","NEIGHBORS[75390]"] chr20:13782504-chr20:13483337 False 0 Read count too low: 1 < 8 FAIL 1
EPG5--RIPOR2 1 0 0.5 0.0 INCL_NON_REF_SPLICE EPG5^ENSG00000152223.15 chr18:45934809:- RIPOR2^ENSG00000111913.20 chr6:24830523:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:159368780:159378780 . NO_LDAS 0.0503 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr6]"] chr18:45934809-chr6:24830523 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EPG5--OR2D3 1 0 0.5 0.0 INCL_NON_REF_SPLICE EPG5^ENSG00000152223.15 chr18:45934809:- OR2D3^ENSG00000178358.4 chr11:6921107:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:159368780:159378780 . NO_LDAS 0.0503 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr11]"] chr18:45934809-chr11:6921107 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EPC2--FAM20B 1 0 1.0 0.0 ONLY_REF_SPLICE EPC2^ENSG00000135999.12 chr2:148645170:+ FAM20B^ENSG00000116199.12 chr1:179043715:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:128009450:128019450 . YES_LDAS 0.1007 GT 1.5628 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr1]"] chr2:148645170-chr1:179043715 False 0 Read count too low: 1 < 8 FAIL 1
ENTPD1--PTP4A2 1 0 1.0 0.0 ONLY_REF_SPLICE ENTPD1^ENSG00000138185.20 chr10:95823364:+ PTP4A2^ENSG00000184007.22 chr1:31919658:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:188615240:188625240 . YES_LDAS 0.1007 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr1]"] chr10:95823364-chr1:31919658 False 0 Read count too low: 1 < 8 FAIL 1
ENPP4--PAN3 1 0 1.0 0.0 ONLY_REF_SPLICE ENPP4^ENSG00000001561.7 chr6:46130189:+ PAN3^ENSG00000152520.14 chr13:28287984:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:166105930:166115930 . YES_LDAS 0.1007 GT 1.5628 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr13]"] chr6:46130189-chr13:28287984 False 0 Read count too low: 1 < 8 FAIL 1
EML2--GIPR 1 0 1.0 0.0 ONLY_REF_SPLICE EML2^ENSG00000125746.18 chr19:45629951:- GIPR^ENSG00000010310.9 chr19:45672851:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:175876800:175886800 . YES_LDAS 0.1007 GT 1.7465 AG 1.7819 ["INTRACHROMOSOMAL[chr19:0.02Mb]","LOCAL_INVERSION:-:+:[22619]"] chr19:45629951-chr19:45672851 False 0 Read count too low: 1 < 8 FAIL 1
EMB--MTREX 1 0 1.0 0.0 ONLY_REF_SPLICE EMB^ENSG00000170571.12 chr5:50441040:- MTREX^ENSG00000039123.16 chr5:55366725:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:118158080:118168080 . YES_LDAS 0.1007 GT 1.7819 AG 1.8062 ["INTRACHROMOSOMAL[chr5:4.86Mb]"] chr5:50441040-chr5:55366725 False 0 Read count too low: 1 < 8 FAIL 1
ELMO1--AOAH 1 0 1.0 0.0 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36861659:- AOAH^ENSG00000136250.12 chr7:36686794:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:106260730:106270730 . YES_LDAS 0.1007 GT 1.9329 AG 1.231 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.13Mb]"] chr7:36861659-chr7:36686794 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
ELMO1--AOAH 1 0 1.0 0.0 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36861659:- AOAH^ENSG00000136250.12 chr7:36674009:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:197093160:197103160 . YES_LDAS 0.1007 GT 1.9329 AG 1.8323 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.13Mb]"] chr7:36861659-chr7:36674009 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
EIF4G3--MYLK3 1 0 1.0 0.0 INCL_NON_REF_SPLICE EIF4G3^ENSG00000075151.22 chr1:20941491:- MYLK3^ENSG00000140795.13 chr16:46732573:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:130819340:130829340 . NO_LDAS 0.1007 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr16]"] chr1:20941491-chr16:46732573 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
EIF4E3--FOXP1 1 0 1.0 0.0 ONLY_REF_SPLICE EIF4E3^ENSG00000163412.13 chr3:71690010:- FOXP1^ENSG00000114861.23 chr3:71493555:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:146120450:146130450 . YES_LDAS 0.1007 GT 1.7056 AG 1.9656 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr3:0.09Mb]","NEIGHBORS[91425]"] chr3:71690010-chr3:71493555 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
EIF3M--DHTKD1 1 0 1.0 0.0 ONLY_REF_SPLICE EIF3M^ENSG00000149100.13 chr11:32583929:+ DHTKD1^ENSG00000181192.12 chr10:12094073:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:182662520:182672520 . YES_LDAS 0.1007 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr10]"] chr11:32583929-chr10:12094073 False 0 Read count too low: 1 < 8 FAIL 1
EIF3J-DT--APTX 1 0 1.0 0.0 ONLY_REF_SPLICE EIF3J-DT^ENSG00000179523.5 chr15:44535760:- APTX^ENSG00000137074.20 chr9:32989895:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:172020220:172030220 . NO_LDAS 0.1007 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr9]"] chr15:44535760-chr9:32989895 False 0 Read count too low: 1 < 8 FAIL 1
EIF3H--DENND1A 1 0 1.0 0.0 ONLY_REF_SPLICE EIF3H^ENSG00000147677.11 chr8:116755666:- DENND1A^ENSG00000119522.16 chr9:123879021:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:178930280:178940280 . YES_LDAS 0.1007 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr9]"] chr8:116755666-chr9:123879021 False 0 Read count too low: 1 < 8 FAIL 1
EIF2B4--ZNF343 1 0 1.0 0.0 ONLY_REF_SPLICE EIF2B4^ENSG00000115211.16 chr2:27366759:- ZNF343^ENSG00000088876.13 chr20:2484656:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:116657330:116667330 . NO_LDAS 0.1007 GT 1.9899 AG 1.5058 ["INTERCHROMOSOMAL[chr2--chr20]"] chr2:27366759-chr20:2484656 False 0 Read count too low: 1 < 8 FAIL 1
EGR3--PWWP3A 1 0 1.0 0.0 INCL_NON_REF_SPLICE EGR3^ENSG00000179388.9 chr8:22693357:- PWWP3A^ENSG00000160953.17 chr19:1356324:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:112373160:112383160 . YES_LDAS 0.1007 GT 1.2419 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr19]"] chr8:22693357-chr19:1356324 False 0 Read count too low: 1 < 8 FAIL 1
EFR3A--TRIM72 1 0 1.0 0.0 INCL_NON_REF_SPLICE EFR3A^ENSG00000132294.15 chr8:131976141:+ TRIM72^ENSG00000177238.14 chr16:31225314:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:190551200:190561200 . NO_LDAS 0.1007 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr16]"] chr8:131976141-chr16:31225314 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ECD--ADK 1 0 1.0 0.0 ONLY_REF_SPLICE ECD^ENSG00000122882.11 chr10:73134603:- ADK^ENSG00000156110.15 chr10:74314667:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:182709040:182719040 . YES_LDAS 0.1007 GT 1.5329 AG 1.7465 ["INTRACHROMOSOMAL[chr10:0.98Mb]"] chr10:73134603-chr10:74314667 False 0 Read count too low: 1 < 8 FAIL 1
E2F6--MRPS5 1 0 1.0 0.0 ONLY_REF_SPLICE E2F6^ENSG00000169016.17 chr2:11465772:- MRPS5^ENSG00000144029.12 chr2:95115203:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:148933820:148943820 . YES_LDAS 0.1007 GT 1.6729 AG 1.9086 ["INTRACHROMOSOMAL[chr2:83.62Mb]"] chr2:11465772-chr2:95115203 False 0 Read count too low: 1 < 8 FAIL 1
DUXAP10--HNRNPC 1 0 0.33 0.0 ONLY_REF_SPLICE DUXAP10^ENSG00000244306.11 chr14:19337580:- HNRNPC^ENSG00000092199.18 chr14:21234229:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:122704920:122714920 . YES_LDAS 0.0332 GT 1.8323 AG 1.6402 ["INTRACHROMOSOMAL[chr14:1.87Mb]"] chr14:19337580-chr14:21234229 False 0 Read count too low: 1 < 8 FAIL 1
DUS1L--HNRNPA1L2 1 0 0.25 0.0 INCL_NON_REF_SPLICE DUS1L^ENSG00000169718.18 chr17:82064169:- HNRNPA1L2^ENSG00000139675.12 chr13:52642910:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:155342800:155352800 . YES_LDAS 0.0252 AT 1.9899 AC 1.7465 ["INTERCHROMOSOMAL[chr17--chr13]"] chr17:82064169-chr13:52642910 False 0 Read count too low: 1 < 8 FAIL 1
DRAM1--AC079907.1 1 0 1.0 0.0 ONLY_REF_SPLICE DRAM1^ENSG00000136048.14 chr12:101901433:+ AC079907.1^ENSG00000257222.1 chr12:102074408:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:190279800:190289800 . YES_LDAS 0.1007 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr12:0.05Mb]","NEIGHBORS[51225]"] chr12:101901433-chr12:102074408 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
DLG1--LRCH3 1 0 1.0 0.0 ONLY_REF_SPLICE DLG1^ENSG00000075711.21 chr3:197194425:- LRCH3^ENSG00000186001.14 chr3:197814908:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:148240920:148250920 . YES_LDAS 0.1007 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.49Mb]"] chr3:197194425-chr3:197814908 False 0 Read count too low: 1 < 8 FAIL 1
DLEU2--CAD 1 0 0.5 0.0 ONLY_REF_SPLICE DLEU2^ENSG00000231607.13 chr13:50049584:- CAD^ENSG00000084774.14 chr2:27221218:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:107608650:107618650 . YES_LDAS 0.0503 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr2]"] chr13:50049584-chr2:27221218 False 0 Read count too low: 1 < 8 FAIL 1
DIRC3--RPL29 1 0 1.0 0.0 INCL_NON_REF_SPLICE DIRC3^ENSG00000231672.8 chr2:217756584:- RPL29^ENSG00000162244.12 chr3:51993862:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:181095760:181105760 . NO_LDAS 0.1007 GT 1.5058 AG 1.5656 ["INTERCHROMOSOMAL[chr2--chr3]"] chr2:217756584-chr3:51993862 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
DENND4A--SMG1P1 1 0 0.5 0.0 INCL_NON_REF_SPLICE DENND4A^ENSG00000174485.16 chr15:65791949:- SMG1P1^ENSG00000237296.9 chr16:22451620:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:125244660:125254660 . YES_LDAS 0.0503 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr16]"] chr15:65791949-chr16:22451620 False 0 Read count too low: 1 < 8 FAIL 1
DECR1--NBN 1 0 1.0 0.0 ONLY_REF_SPLICE DECR1^ENSG00000104325.7 chr8:90001561:+ NBN^ENSG00000104320.14 chr8:89958854:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:147862920:147872920 . NO_LDAS 0.1007 GT 1.7819 AG 1.6049 ["INTRACHROMOSOMAL[chr8:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1823]"] chr8:90001561-chr8:89958854 False 0 Read count too low: 1 < 8 FAIL 1
DBF4--LUC7L2 1 0 1.0 0.0 ONLY_REF_SPLICE DBF4^ENSG00000006634.8 chr7:87878133:+ LUC7L2^ENSG00000146963.18 chr7:139376062:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:199520700:199530700 . YES_LDAS 0.1007 GT 1.5546 AG 1.9656 ["INTRACHROMOSOMAL[chr7:51.43Mb]"] chr7:87878133-chr7:139376062 False 0 Read count too low: 1 < 8 FAIL 1
DARS1-AS1--SEC63 1 0 1.0 0.0 ONLY_REF_SPLICE DARS1-AS1^ENSG00000231890.8 chr2:136003367:+ SEC63^ENSG00000025796.14 chr6:107897731:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:197316780:197326780 . NO_LDAS 0.1007 GT 1.9329 AG 1.585 ["INTERCHROMOSOMAL[chr2--chr6]"] chr2:136003367-chr6:107897731 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
DAP--SETD5 1 0 1.0 0.0 ONLY_REF_SPLICE DAP^ENSG00000112977.16 chr5:10748175:- SETD5^ENSG00000168137.18 chr3:9470459:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:110653770:110663770 . YES_LDAS 0.1007 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr3]"] chr5:10748175-chr3:9470459 False 0 Read count too low: 1 < 8 FAIL 1
CUL7--AC011840.1 1 0 0.25 0.0 INCL_NON_REF_SPLICE CUL7^ENSG00000044090.11 chr6:43052702:- AC011840.1^ENSG00000231421.8 chr17:30576206:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:179411900:179421900 . NO_LDAS 0.0252 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr17]"] chr6:43052702-chr17:30576206 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CU633906.2--CIAPIN1 1 0 0.33 0.0 ONLY_REF_SPLICE CU633906.2^ENSG00000278903.3 chr21:6322697:+ CIAPIN1^ENSG00000005194.15 chr16:57429280:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:188671640:188681640 . YES_LDAS 0.0332 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr16]"] chr21:6322697-chr16:57429280 False 0 Read count too low: 1 < 8 FAIL 1
CTSC--MOXD1 1 0 1.0 0.0 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88334937:- MOXD1^ENSG00000079931.15 chr6:132374777:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:103117840:103127840 . YES_LDAS 0.1007 GT 1.6049 AG 1.5628 ["INTERCHROMOSOMAL[chr11--chr6]"] chr11:88334937-chr6:132374777 False 0 Read count too low: 1 < 8 FAIL 1
CTSC--AC111006.1 1 0 1.0 0.0 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88337501:- AC111006.1^ENSG00000285454.1 chr4:42238694:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:159531310:159541310 . NO_LDAS 0.1007 GT 1.9086 AG 1.4566 ["INTERCHROMOSOMAL[chr11--chr4]"] chr11:88337501-chr4:42238694 False 0 Read count too low: 1 < 8 FAIL 1
CPT1B--AC103760.1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CPT1B^ENSG00000205560.13 chr22:50571154:- AC103760.1^ENSG00000254231.3 chr8:86333992:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:169191040:169201040 . NO_LDAS 0.1007 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr22--chr8]"] chr22:50571154-chr8:86333992 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CPSF6--ITPR2 1 0 1.0 0.0 ONLY_REF_SPLICE CPSF6^ENSG00000111605.18 chr12:69262562:+ ITPR2^ENSG00000123104.12 chr12:26655852:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:166700290:166710290 . YES_LDAS 0.1007 GT 1.9899 AG 1.7056 ["INTRACHROMOSOMAL[chr12:42.41Mb]"] chr12:69262562-chr12:26655852 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
COX15--DACH2 1 0 1.0 0.0 INCL_NON_REF_SPLICE COX15^ENSG00000014919.13 chr10:99720848:- DACH2^ENSG00000126733.21 chrX:86830028:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:114302020:114312020 . NO_LDAS 0.1007 GT 1.3383 AG 1.3996 ["INTERCHROMOSOMAL[chr10--chrX]"] chr10:99720848-chrX:86830028 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
COMMD1--STX18 1 0 1.0 0.0 ONLY_REF_SPLICE COMMD1^ENSG00000173163.10 chr2:62000982:+ STX18^ENSG00000168818.10 chr4:4471706:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:148792760:148802760 . YES_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr4]"] chr2:62000982-chr4:4471706 False 0 Read count too low: 1 < 8 FAIL 1
COG8--RPL37A 1 0 1.0 0.0 INCL_NON_REF_SPLICE COG8^ENSG00000213380.16 chr16:69332714:- RPL37A^ENSG00000197756.10 chr2:216501813:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:152653340:152663340 . NO_LDAS 0.1007 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr2]"] chr16:69332714-chr2:216501813 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CNOT2--XPO7 1 0 1.0 0.0 INCL_NON_REF_SPLICE CNOT2^ENSG00000111596.14 chr12:70278274:+ XPO7^ENSG00000130227.17 chr8:21999660:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:102816310:102826310 . NO_LDAS 0.1007 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr8]"] chr12:70278274-chr8:21999660 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CMPK2--RNF31 1 0 1.0 0.0 INCL_NON_REF_SPLICE CMPK2^ENSG00000134326.12 chr2:6861184:- RNF31^ENSG00000092098.17 chr14:24154953:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:196952640:196962640 . NO_LDAS 0.1007 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr14]"] chr2:6861184-chr14:24154953 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CLN6--RPLP1 1 0 1.0 0.0 ONLY_REF_SPLICE CLN6^ENSG00000128973.13 chr15:68218536:- RPLP1^ENSG00000137818.12 chr15:69455170:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:199487060:199497060 . YES_LDAS 0.1007 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chr15:1.20Mb]"] chr15:68218536-chr15:69455170 False 0 Read count too low: 1 < 8 FAIL 1
CLIC2--AC234781.1 1 0 1.0 0.0 ONLY_REF_SPLICE CLIC2^ENSG00000155962.13 chrX:155334371:- AC234781.1^ENSG00000224216.1 chrX:155335249:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:121507450:121517450 . YES_LDAS 0.1007 GT 1.8062 AG 1.8323 ["DEEPEST2019","INTRACHROMOSOMAL[chrX:0.00Mb]","LOCAL_REARRANGEMENT:-:[201]"] chrX:155334371-chrX:155335249 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
CLEC16A--IL21R 1 0 1.0 0.0 ONLY_REF_SPLICE CLEC16A^ENSG00000038532.16 chr16:11061022:+ IL21R^ENSG00000103522.16 chr16:27430056:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:174671480:174681480 . YES_LDAS 0.1007 GT 1.9656 AG 1.7968 ["INTRACHROMOSOMAL[chr16:16.22Mb]"] chr16:11061022-chr16:27430056 False 0 Read count too low: 1 < 8 FAIL 1
CLASP2--SOCS2-AS1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CLASP2^ENSG00000163539.17 chr3:33602952:- SOCS2-AS1^ENSG00000246985.8 chr12:93570822:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:192489640:192499640 . NO_LDAS 0.1007 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr12]"] chr3:33602952-chr12:93570822 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CHMP3--FSBP 1 0 1.0 0.0 ONLY_REF_SPLICE CHMP3^ENSG00000115561.16 chr2:86563304:- FSBP^ENSG00000265817.4 chr8:94380406:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:151227930:151237930 . YES_LDAS 0.1007 GT 1.7819 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr8]"] chr2:86563304-chr8:94380406 False 0 Read count too low: 1 < 8 FAIL 1
CHCHD3--EXOC4 1 0 1.0 0.0 ONLY_REF_SPLICE CHCHD3^ENSG00000106554.13 chr7:133070142:- EXOC4^ENSG00000131558.15 chr7:133274982:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:163935060:163945060 . YES_LDAS 0.1007 GT 1.9329 AG 1.9656 ["Klijn_CellLines","DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.17Mb]"] chr7:133070142-chr7:133274982 False 0 Read count too low: 1 < 8 FAIL 1
CFLAR--CLK1 1 0 1.0 0.0 ONLY_REF_SPLICE CFLAR^ENSG00000003402.20 chr2:201149835:+ CLK1^ENSG00000013441.16 chr2:200861862:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:147823080:147833080 . YES_LDAS 0.1007 GT 1.9086 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.25Mb]"] chr2:201149835-chr2:200861862 False 0 Read count too low: 1 < 8 FAIL 1
CERS6--EPC2 1 0 1.0 0.0 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168456618:+ EPC2^ENSG00000135999.12 chr2:148690214:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:107604770:107614770 . NO_LDAS 0.1007 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr2:19.67Mb]"] chr2:168456618-chr2:148690214 False 0 Read count too low: 1 < 8 FAIL 1
CEP192--AIM2 1 0 1.0 0.0 ONLY_REF_SPLICE CEP192^ENSG00000101639.18 chr18:13069856:+ AIM2^ENSG00000163568.15 chr1:159063674:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:197074720:197084720 . NO_LDAS 0.1007 GT 1.7819 AG 1.4716 ["INTERCHROMOSOMAL[chr18--chr1]"] chr18:13069856-chr1:159063674 False 0 Read count too low: 1 < 8 FAIL 1
CDKN2AIP--DDX42 1 0 1.0 0.0 ONLY_REF_SPLICE CDKN2AIP^ENSG00000168564.6 chr4:183445634:+ DDX42^ENSG00000198231.13 chr17:63800468:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:100276570:100286570 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr17]"] chr4:183445634-chr17:63800468 False 0 Read count too low: 1 < 8 FAIL 1
CDKN1A--VDAC1 1 0 1.0 0.0 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ VDAC1^ENSG00000213585.11 chr5:133993015:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:130651970:130661970 . YES_LDAS 0.1007 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr5]"] chr6:36678798-chr5:133993015 False 0 Read count too low: 1 < 8 FAIL 1
CDK13--ANKRD13A 1 0 1.0 0.0 ONLY_REF_SPLICE CDK13^ENSG00000065883.16 chr7:40002031:+ ANKRD13A^ENSG00000076513.17 chr12:110019139:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:150055180:150065180 . YES_LDAS 0.1007 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr12]"] chr7:40002031-chr12:110019139 False 0 Read count too low: 1 < 8 FAIL 1
CDCA7--SLC25A6 1 0 1.0 0.0 ONLY_REF_SPLICE CDCA7^ENSG00000144354.14 chr2:173358837:+ SLC25A6^ENSG00000169100.14 chrX:1389727:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:135925880:135935880 . YES_LDAS 0.1007 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chrX]"] chr2:173358837-chrX:1389727 False 0 Read count too low: 1 < 8 FAIL 1
CD79A--NIPA2 1 0 1.0 0.0 INCL_NON_REF_SPLICE CD79A^ENSG00000105369.10 chr19:41877383:+ NIPA2^ENSG00000140157.16 chr15:22838776:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:157783150:157793150 . YES_LDAS 0.1007 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr15]"] chr19:41877383-chr15:22838776 False 0 Read count too low: 1 < 8 FAIL 1
CD58--MBD2 1 0 1.0 0.0 ONLY_REF_SPLICE CD58^ENSG00000116815.16 chr1:116570903:- MBD2^ENSG00000134046.12 chr18:54205157:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:187368520:187378520 . YES_LDAS 0.1007 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr18]"] chr1:116570903-chr18:54205157 False 0 Read count too low: 1 < 8 FAIL 1
CD38--TMEM181 1 0 1.0 0.0 ONLY_REF_SPLICE CD38^ENSG00000004468.13 chr4:15778647:+ TMEM181^ENSG00000146433.9 chr6:158573420:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:104746320:104756320 . YES_LDAS 0.1007 GT 1.9899 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr6]"] chr4:15778647-chr6:158573420 False 0 Read count too low: 1 < 8 FAIL 1
CD38--KLF8 1 0 1.0 0.0 INCL_NON_REF_SPLICE CD38^ENSG00000004468.13 chr4:15824998:+ KLF8^ENSG00000102349.18 chrX:56268997:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:180489720:180499720 . YES_LDAS 0.1007 GT 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr4--chrX]"] chr4:15824998-chrX:56268997 False 0 Read count too low: 1 < 8 FAIL 1
CD22--LANCL1 1 0 1.0 0.0 ONLY_REF_SPLICE CD22^ENSG00000012124.17 chr19:35329230:+ LANCL1^ENSG00000115365.12 chr2:210472076:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:173485160:173495160 . YES_LDAS 0.1007 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr2]"] chr19:35329230-chr2:210472076 False 0 Read count too low: 1 < 8 FAIL 1
CCDC88B--SLC35A3 1 0 1.0 0.0 INCL_NON_REF_SPLICE CCDC88B^ENSG00000168071.22 chr11:64351311:+ SLC35A3^ENSG00000117620.15 chr1:99970560:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:119178890:119188890 . NO_LDAS 0.1007 GT 1.6402 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr1]"] chr11:64351311-chr1:99970560 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CCDC126--CACNB4 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC126^ENSG00000169193.12 chr7:23611553:+ CACNB4^ENSG00000182389.20 chr2:151883370:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:114352690:114362690 . YES_LDAS 0.1007 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr2]"] chr7:23611553-chr2:151883370 False 0 Read count too low: 1 < 8 FAIL 1
CCDC125--MTRF1 1 0 1.0 0.0 ONLY_REF_SPLICE CCDC125^ENSG00000183323.13 chr5:69294793:- MTRF1^ENSG00000120662.16 chr13:41260915:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:161881260:161891260 . YES_LDAS 0.1007 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr13]"] chr5:69294793-chr13:41260915 False 0 Read count too low: 1 < 8 FAIL 1
CC2D1B--UBALD1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CC2D1B^ENSG00000154222.15 chr1:52358331:- UBALD1^ENSG00000153443.13 chr16:4609125:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:144046790:144056790 . NO_LDAS 0.1007 GT 1.4295 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr16]"] chr1:52358331-chr16:4609125 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CBX5--SERINC2 1 0 1.0 0.0 ONLY_REF_SPLICE CBX5^ENSG00000094916.16 chr12:54280008:- SERINC2^ENSG00000168528.12 chr1:31432967:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:158303390:158313390 . NO_LDAS 0.1007 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr1]"] chr12:54280008-chr1:31432967 False 0 Read count too low: 1 < 8 FAIL 1
CBFA2T2--ITSN2 1 0 1.0 0.0 ONLY_REF_SPLICE CBFA2T2^ENSG00000078699.22 chr20:33490301:+ ITSN2^ENSG00000198399.15 chr2:24221066:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:159354690:159364690 . YES_LDAS 0.1007 GT 1.6402 AG 1.7819 ["INTERCHROMOSOMAL[chr20--chr2]"] chr20:33490301-chr2:24221066 False 0 Read count too low: 1 < 8 FAIL 1
CARD11--SRSF6 1 0 1.0 0.0 ONLY_REF_SPLICE CARD11^ENSG00000198286.10 chr7:2922634:- SRSF6^ENSG00000124193.16 chr20:43459771:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:186735560:186745560 . YES_LDAS 0.1007 GT 1.8062 AG 1.3383 ["INTERCHROMOSOMAL[chr7--chr20]"] chr7:2922634-chr20:43459771 False 0 Read count too low: 1 < 8 FAIL 1
CAPZB--MICOS10P2 1 0 0.5 0.0 INCL_NON_REF_SPLICE CAPZB^ENSG00000077549.19 chr1:19485436:- MICOS10P2^ENSG00000270714.1 chr17:64747428:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:104704240:104714240 . NO_LDAS 0.0503 GT 1.6402 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr17]"] chr1:19485436-chr17:64747428 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CAPNS1--NOTCH2NLC 1 0 0.5 0.0 INCL_NON_REF_SPLICE CAPNS1^ENSG00000126247.11 chr19:36142314:+ NOTCH2NLC^ENSG00000286219.1 chr1:149390804:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:112685150:112695150 . NO_LDAS 0.0503 GT 1.6895 AG 0.9183 ["INTERCHROMOSOMAL[chr19--chr1]"] chr19:36142314-chr1:149390804 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CAPNS1--BMPR2 1 0 0.5 0.0 INCL_NON_REF_SPLICE CAPNS1^ENSG00000126247.11 chr19:36142314:+ BMPR2^ENSG00000204217.15 chr2:202376513:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:112685150:112695150 . NO_LDAS 0.0503 GT 1.6895 AG 0.9183 ["INTERCHROMOSOMAL[chr19--chr2]"] chr19:36142314-chr2:202376513 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
CALM3--PNRC1 1 0 1.0 0.0 INCL_NON_REF_SPLICE CALM3^ENSG00000160014.17 chr19:46605857:+ PNRC1^ENSG00000146278.11 chr6:89081079:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:109421170:109431170 . NO_LDAS 0.1007 GT 1.8323 AG 1.7232 ["INTERCHROMOSOMAL[chr19--chr6]"] chr19:46605857-chr6:89081079 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BST2--H2BC9 1 0 1.0 0.0 INCL_NON_REF_SPLICE BST2^ENSG00000130303.14 chr19:17404143:- H2BC9^ENSG00000275713.2 chr6:26251933:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:156460170:156470170 . YES_LDAS 0.1007 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr6]"] chr19:17404143-chr6:26251933 False 0 Read count too low: 1 < 8 FAIL 1
BRI3BP--UBC 1 0 1.0 0.0 ONLY_REF_SPLICE BRI3BP^ENSG00000184992.13 chr12:124994003:+ UBC^ENSG00000150991.15 chr12:124913774:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:193395620:193405620 . YES_LDAS 0.1007 GT 1.7819 AG 1.9329 ["ChimerSeq","INTRACHROMOSOMAL[chr12:0.08Mb]","LOCAL_INVERSION:+:-:[76277]"] chr12:124994003-chr12:124913774 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
BPTF--XIST 1 0 0.33 0.0 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ XIST^ENSG00000229807.12 chrX:73849869:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:166865900:166875900 . NO_LDAS 0.0332 GT 1.5628 AG 1.5546 ["INTERCHROMOSOMAL[chr17--chrX]"] chr17:67945620-chrX:73849869 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
BPTF--DCXR 1 0 0.33 0.0 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ DCXR^ENSG00000169738.8 chr17:82037080:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:166865900:166875900 . NO_LDAS 0.0332 GT 1.5628 AG 1.6049 ["INTRACHROMOSOMAL[chr17:14.05Mb]"] chr17:67945620-chr17:82037080 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
BPTF--BSND 1 0 0.33 0.0 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ BSND^ENSG00000162399.9 chr1:55006997:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:166865900:166875900 . NO_LDAS 0.0332 GT 1.5628 AG 1.4256 ["INTERCHROMOSOMAL[chr17--chr1]"] chr17:67945620-chr1:55006997 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
BOLA2--ZRANB2-AS2 1 0 0.5 0.0 INCL_NON_REF_SPLICE BOLA2^ENSG00000183336.8 chr16:29454016:- ZRANB2-AS2^ENSG00000229956.11 chr1:71238144:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:111787400:111797400 . YES_LDAS 0.0503 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr1]"] chr16:29454016-chr1:71238144 False 0 Read count too low: 1 < 8 FAIL 1
BOLA2--GSN 1 0 0.5 0.0 ONLY_REF_SPLICE BOLA2^ENSG00000183336.8 chr16:29454016:- GSN^ENSG00000148180.21 chr9:121207800:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:125535910:125545910 . NO_LDAS 0.0503 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chr9]"] chr16:29454016-chr9:121207800 False 0 Read count too low: 1 < 8 FAIL 1
BLZF1--ATP1B1 1 0 1.0 0.0 ONLY_REF_SPLICE BLZF1^ENSG00000117475.14 chr1:169368342:+ ATP1B1^ENSG00000143153.13 chr1:169124884:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:124804580:124814580 . NO_LDAS 0.1007 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.24Mb]"] chr1:169368342-chr1:169124884 False 0 Read count too low: 1 < 8 FAIL 1
BIRC6--DIS3L2 1 0 1.0 0.0 ONLY_REF_SPLICE BIRC6^ENSG00000115760.14 chr2:32357486:+ DIS3L2^ENSG00000144535.20 chr2:232014835:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:177354900:177364900 . YES_LDAS 0.1007 GT 1.7465 AG 1.7465 ["INTRACHROMOSOMAL[chr2:199.34Mb]"] chr2:32357486-chr2:232014835 False 0 Read count too low: 1 < 8 FAIL 1
BCL2L2-PABPN1--BMPR2 1 0 1.0 0.0 ONLY_REF_SPLICE BCL2L2-PABPN1^ENSG00000258643.6 chr14:23319830:+ BMPR2^ENSG00000204217.15 chr2:202464809:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:119272570:119282570 . YES_LDAS 0.1007 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr2]"] chr14:23319830-chr2:202464809 False 0 Read count too low: 1 < 8 FAIL 1
B2M--PIEZO1 1 0 1.0 0.0 ONLY_REF_SPLICE B2M^ENSG00000166710.21 chr15:44711613:+ PIEZO1^ENSG00000103335.22 chr16:88749479:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:138244050:138254050 . YES_LDAS 0.1007 GT 1.9656 AG 1.4566 ["INTERCHROMOSOMAL[chr15--chr16]"] chr15:44711613-chr16:88749479 False 0 Read count too low: 1 < 8 FAIL 1
B2M--AHRR 1 0 1.0 0.0 ONLY_REF_SPLICE B2M^ENSG00000166710.21 chr15:44711613:+ AHRR^ENSG00000063438.19 chr5:343893:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:151872650:151882650 . YES_LDAS 0.1007 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr5]"] chr15:44711613-chr5:343893 False 0 Read count too low: 1 < 8 FAIL 1
ATP5PD--ZMYND8 1 0 1.0 0.0 INCL_NON_REF_SPLICE ATP5PD^ENSG00000167863.12 chr17:75040085:- ZMYND8^ENSG00000101040.19 chr20:47276494:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:198100320:198110320 . NO_LDAS 0.1007 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr20]"] chr17:75040085-chr20:47276494 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
ATP5MD--ENTPD1 1 0 1.0 0.0 ONLY_REF_SPLICE ATP5MD^ENSG00000173915.16 chr10:103392191:- ENTPD1^ENSG00000138185.20 chr10:95823237:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:125726120:125736120 . YES_LDAS 0.1007 GT 1.6049 AG 1.8892 ["INTRACHROMOSOMAL[chr10:7.51Mb]"] chr10:103392191-chr10:95823237 False 0 Read count too low: 1 < 8 FAIL 1
ATP5F1C--EDA2R 1 0 1.0 0.0 ONLY_REF_SPLICE ATP5F1C^ENSG00000165629.20 chr10:7802854:+ EDA2R^ENSG00000131080.15 chrX:66598093:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:177185000:177195000 . YES_LDAS 0.1007 GT 1.8256 AG 1.5656 ["INTERCHROMOSOMAL[chr10--chrX]"] chr10:7802854-chrX:66598093 False 0 Read count too low: 1 < 8 FAIL 1
ATP5F1C--CMIP 1 0 1.0 0.0 ONLY_REF_SPLICE ATP5F1C^ENSG00000165629.20 chr10:7802854:+ CMIP^ENSG00000153815.17 chr16:81691775:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:154003220:154013220 . YES_LDAS 0.1007 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr16]"] chr10:7802854-chr16:81691775 False 0 Read count too low: 1 < 8 FAIL 1
ATP11A--CUL4A 1 0 1.0 0.0 ONLY_REF_SPLICE ATP11A^ENSG00000068650.18 chr13:112842379:+ CUL4A^ENSG00000139842.15 chr13:113253082:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:143860520:143870520 . YES_LDAS 0.1007 GT 1.8892 AG 1.8323 ["ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.32Mb]"] chr13:112842379-chr13:113253082 False 0 Read count too low: 1 < 8 FAIL 1
ATG13--MLLT10 1 0 1.0 0.0 ONLY_REF_SPLICE ATG13^ENSG00000175224.16 chr11:46630100:+ MLLT10^ENSG00000078403.17 chr10:21586294:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:149266870:149276870 . YES_LDAS 0.1007 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr10]"] chr11:46630100-chr10:21586294 False 0 Read count too low: 1 < 8 FAIL 1
ATAD3B--NPAS3 1 0 1.0 0.0 ONLY_REF_SPLICE ATAD3B^ENSG00000160072.20 chr1:1477350:+ NPAS3^ENSG00000151322.20 chr14:33578239:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:154906640:154916640 . NO_LDAS 0.1007 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr14]"] chr1:1477350-chr14:33578239 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ATAD2B--BIRC6 1 0 1.0 0.0 ONLY_REF_SPLICE ATAD2B^ENSG00000119778.15 chr2:23857415:- BIRC6^ENSG00000115760.14 chr2:32514990:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:107149170:107159170 . YES_LDAS 0.1007 GT 1.8892 AG 1.5546 ["INTRACHROMOSOMAL[chr2:8.43Mb]"] chr2:23857415-chr2:32514990 False 0 Read count too low: 1 < 8 FAIL 1
ASL--CRCP 1 0 1.0 0.0 ONLY_REF_SPLICE ASL^ENSG00000126522.17 chr7:66092663:+ CRCP^ENSG00000241258.7 chr7:66127704:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:147222470:147232470 . YES_LDAS 0.1007 GT 1.9329 AG 1.9656 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr7:0.02Mb]","NEIGHBORS[19907]"] chr7:66092663-chr7:66127704 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
ARMC10--TANK 1 0 1.0 0.0 ONLY_REF_SPLICE ARMC10^ENSG00000170632.14 chr7:103083830:+ TANK^ENSG00000136560.14 chr2:161230971:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:111392050:111402050 . YES_LDAS 0.1007 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr2]"] chr7:103083830-chr2:161230971 False 0 Read count too low: 1 < 8 FAIL 1
ARMC10--PSMC2 1 0 1.0 0.0 ONLY_REF_SPLICE ARMC10^ENSG00000170632.14 chr7:103075881:+ PSMC2^ENSG00000161057.13 chr7:103361957:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:107453140:107463140 . YES_LDAS 0.1007 GT 1.8892 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.23Mb]"] chr7:103075881-chr7:103361957 False 0 Read count too low: 1 < 8 FAIL 1
ARID3A--RNF126 1 0 1.0 0.0 ONLY_REF_SPLICE ARID3A^ENSG00000116017.11 chr19:932742:+ RNF126^ENSG00000070423.18 chr19:652884:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:128551630:128561630 . NO_LDAS 0.1007 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.26Mb]"] chr19:932742-chr19:652884 False 0 Read count too low: 1 < 8 FAIL 1
AQR--FAM86C1P 1 0 1.0 0.0 ONLY_REF_SPLICE AQR^ENSG00000021776.11 chr15:34896897:- FAM86C1P^ENSG00000158483.17 chr11:71799561:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:174968760:174978760 . YES_LDAS 0.1007 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr11]"] chr15:34896897-chr11:71799561 False 0 Read count too low: 1 < 8 FAIL 1
APPBP2--KLK1 1 0 1.0 0.0 ONLY_REF_SPLICE APPBP2^ENSG00000062725.10 chr17:60525794:- KLK1^ENSG00000167748.11 chr19:50820443:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:171892000:171902000 . YES_LDAS 0.1007 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr19]"] chr17:60525794-chr19:50820443 False 0 Read count too low: 1 < 8 FAIL 1
APOL2--MBD3 1 0 1.0 0.0 ONLY_REF_SPLICE APOL2^ENSG00000128335.14 chr22:36239441:- MBD3^ENSG00000071655.18 chr19:1585214:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:126340980:126350980 . YES_LDAS 0.1007 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr22--chr19]"] chr22:36239441-chr19:1585214 False 0 Read count too low: 1 < 8 FAIL 1
APLP2--CERS3 1 0 1.0 0.0 INCL_NON_REF_SPLICE APLP2^ENSG00000084234.18 chr11:130121799:+ CERS3^ENSG00000154227.14 chr15:100402823:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:130145370:130155370 . NO_LDAS 0.1007 GT 1.7819 AG 0.9968 ["INTERCHROMOSOMAL[chr11--chr15]"] chr11:130121799-chr15:100402823 True aih_curated_blacklist score(3) 0 aih_curated_blacklist score(3) FAIL 1
AP4B1--JMJD1C 1 0 1.0 0.0 ONLY_REF_SPLICE AP4B1^ENSG00000134262.13 chr1:113904605:- JMJD1C^ENSG00000171988.19 chr10:63197563:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:151775870:151785870 . YES_LDAS 0.1007 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr10]"] chr1:113904605-chr10:63197563 False 0 Read count too low: 1 < 8 FAIL 1
AP3B1--IQGAP2 1 0 1.0 0.0 ONLY_REF_SPLICE AP3B1^ENSG00000132842.14 chr5:78089393:- IQGAP2^ENSG00000145703.16 chr5:76570580:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:160201460:160211460 . YES_LDAS 0.1007 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr5:1.29Mb]"] chr5:78089393-chr5:76570580 False 0 Read count too low: 1 < 8 FAIL 1
ANKRD44--KANSL1L 1 0 1.0 0.0 ONLY_REF_SPLICE ANKRD44^ENSG00000065413.20 chr2:197310578:- KANSL1L^ENSG00000144445.17 chr2:210154611:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:187349080:187359080 . NO_LDAS 0.1007 GT 1.7056 AG 1.7465 ["INTRACHROMOSOMAL[chr2:12.71Mb]"] chr2:197310578-chr2:210154611 False 0 Read count too low: 1 < 8 FAIL 1
ANAPC4--CDC123 1 0 1.0 0.0 ONLY_REF_SPLICE ANAPC4^ENSG00000053900.11 chr4:25414700:+ CDC123^ENSG00000151465.14 chr10:12250311:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:170419880:170429880 . YES_LDAS 0.1007 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr10]"] chr4:25414700-chr10:12250311 False 0 Read count too low: 1 < 8 FAIL 1
AL139260.1--SEC61A2 1 0 1.0 0.0 ONLY_REF_SPLICE AL139260.1^ENSG00000228436.3 chr1:38860239:+ SEC61A2^ENSG00000065665.21 chr10:12156907:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:115900250:115910250 . YES_LDAS 0.1007 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr10]"] chr1:38860239-chr10:12156907 False 0 Read count too low: 1 < 8 FAIL 1
AL050309.1--KLF8 1 0 1.0 0.0 ONLY_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:56014961:+ KLF8^ENSG00000102349.18 chrX:56250231:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:109993230:110003230 . NO_LDAS 0.1007 GT 1.9329 AG 1.7968 ["INTRACHROMOSOMAL[chrX:0.02Mb]","NEIGHBORS[23085]"] chrX:56014961-chrX:56250231 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
AL049766.1--ABL1 1 0 1.0 0.0 ONLY_REF_SPLICE AL049766.1^ENSG00000274760.1 chr20:49279208:+ ABL1^ENSG00000097007.19 chr9:130862763:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:104581030:104591030 . YES_LDAS 0.1007 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr20--chr9]"] chr20:49279208-chr9:130862763 False 0 Read count too low: 1 < 8 FAIL 1
AIG1--SYNE1 1 0 1.0 0.0 ONLY_REF_SPLICE AIG1^ENSG00000146416.19 chr6:143165183:+ SYNE1^ENSG00000131018.24 chr6:152256765:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:126734270:126744270 . YES_LDAS 0.1007 GT 1.9656 AG 1.9899 ["INTRACHROMOSOMAL[chr6:8.78Mb]"] chr6:143165183-chr6:152256765 False 0 Read count too low: 1 < 8 FAIL 1
AGO3--EPB41 1 0 1.0 0.0 ONLY_REF_SPLICE AGO3^ENSG00000126070.20 chr1:35945863:+ EPB41^ENSG00000159023.22 chr1:28987431:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:160703590:160713590 . YES_LDAS 0.1007 GT 1.7056 AG 1.6895 ["INTRACHROMOSOMAL[chr1:6.81Mb]"] chr1:35945863-chr1:28987431 False 0 Read count too low: 1 < 8 FAIL 1
AF165147.1--LRRFIP2 1 0 1.0 0.0 ONLY_REF_SPLICE AF165147.1^ENSG00000232855.7 chr21:28577275:- LRRFIP2^ENSG00000093167.18 chr3:37065942:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:196419080:196429080 . NO_LDAS 0.1007 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr21--chr3]"] chr21:28577275-chr3:37065942 False 0 Read count too low: 1 < 8 FAIL 1
ADAR--MT-CO3 1 0 1.0 0.0 INCL_NON_REF_SPLICE ADAR^ENSG00000160710.18 chr1:154607729:- MT-CO3^ENSG00000198938.2 chrM:9526:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:173498700:173508700 . YES_LDAS 0.1007 GT 1.2867 AG 1.2419 ["INTERCHROMOSOMAL[chr1--chrM]"] chr1:154607729-chrM:9526 False 0 Read count too low: 1 < 8 FAIL 1
ADAP1--C7orf50 1 0 1.0 0.0 ONLY_REF_SPLICE ADAP1^ENSG00000105963.15 chr7:954396:- C7orf50^ENSG00000146540.15 chr7:1010143:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:122320460:122330460 . YES_LDAS 0.1007 GT 1.5628 AG 1.8892 ["DEEPEST2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.04Mb]","LOCAL_REARRANGEMENT:-:[41579]"] chr7:954396-chr7:1010143 False 0 Read count too low: 1 < 8 FAIL 1
ACTN4--EIF3K 1 0 1.0 0.0 ONLY_REF_SPLICE ACTN4^ENSG00000130402.13 chr19:38706131:+ EIF3K^ENSG00000178982.10 chr19:38624077:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:123470030:123480030 . YES_LDAS 0.1007 GT 1.9086 AG 1.8892 ["TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:+:[10694]"] chr19:38706131-chr19:38624077 False 0 Read count too low: 1 < 8 FAIL 1
ACAP2--ANO10 1 0 1.0 0.0 ONLY_REF_SPLICE ACAP2^ENSG00000114331.15 chr3:195442795:- ANO10^ENSG00000160746.13 chr3:43432727:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:196033280:196043280 . YES_LDAS 0.1007 GT 1.6729 AG 1.8295 ["INTRACHROMOSOMAL[chr3:151.58Mb]"] chr3:195442795-chr3:43432727 False 0 Read count too low: 1 < 8 FAIL 1
AC211476.4--AC105052.5 1 0 0.12 0.0 INCL_NON_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73097567:+ AC105052.5^ENSG00000286830.1 chr7:102703481:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:180141440:180151440 . YES_LDAS 0.0121 GT 1.4566 AG 1.7465 ["INTRACHROMOSOMAL[chr7:29.62Mb]"] chr7:73097567-chr7:102703481 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC211476.4--AC105052.5 1 0 0.12 0.0 INCL_NON_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73069531:+ AC105052.5^ENSG00000286830.1 chr7:102703481:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:180141440:180151440 . YES_LDAS 0.0121 GT 1.4566 AG 1.7465 ["INTRACHROMOSOMAL[chr7:29.62Mb]"] chr7:73069531-chr7:102703481 True pair|recurrent breakpoints 0 Blacklisted FAIL 1
AC107983.1--NPM1P39 1 0 0.25 0.0 INCL_NON_REF_SPLICE AC107983.1^ENSG00000227077.3 chr17:18572870:+ NPM1P39^ENSG00000225159.1 chr1:27207570:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:189160820:189170820 . YES_LDAS 0.0252 AT 1.5656 AC 1.6729 ["INTERCHROMOSOMAL[chr17--chr1]"] chr17:18572870-chr1:27207570 False 0 Read count too low: 1 < 8 FAIL 1
AC092053.3--KIFC2 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC092053.3^ENSG00000284669.1 chr3:39152871:+ KIFC2^ENSG00000167702.13 chr8:144466461:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:131711730:131721730 . YES_LDAS 0.1007 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr8]"] chr3:39152871-chr8:144466461 False 0 Read count too low: 1 < 8 FAIL 1
AC091390.3--SEC24A 1 0 0.5 0.0 ONLY_REF_SPLICE AC091390.3^ENSG00000239969.5 chr7:102376322:+ SEC24A^ENSG00000113615.13 chr5:134671809:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:193129600:193139600 . YES_LDAS 0.0503 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr5]"] chr7:102376322-chr5:134671809 False 0 Read count too low: 1 < 8 FAIL 1
AC062037.3--TRIP4 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC062037.3^ENSG00000286011.1 chr2:85421713:+ TRIP4^ENSG00000103671.10 chr15:64395452:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:149387090:149397090 . NO_LDAS 0.1007 GT 1.7232 AG 1.4295 ["INTERCHROMOSOMAL[chr2--chr15]"] chr2:85421713-chr15:64395452 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC012236.1--ARHGAP11A 1 0 0.5 0.0 ONLY_REF_SPLICE AC012236.1^ENSG00000259772.6 chr15:31229272:- ARHGAP11A^ENSG00000198826.11 chr15:32620108:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:127896290:127906290 . YES_LDAS 0.0503 GT 1.9899 AG 1.5656 ["INTRACHROMOSOMAL[chr15:1.38Mb]"] chr15:31229272-chr15:32620108 False 0 Read count too low: 1 < 8 FAIL 1
AC010931.1--HUWE1 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC010931.1^ENSG00000248540.3 chr15:74126199:- HUWE1^ENSG00000086758.16 chrX:53603499:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:192819220:192829220 . NO_LDAS 0.1007 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chrX]"] chr15:74126199-chrX:53603499 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC009245.1--CMIP 1 0 0.33 0.0 INCL_NON_REF_SPLICE AC009245.1^ENSG00000230383.1 chr7:137722674:+ CMIP^ENSG00000153815.17 chr16:81607567:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:133449550:133459550 . YES_LDAS 0.0332 GT 1.5656 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr16]"] chr7:137722674-chr16:81607567 False 0 Read count too low: 1 < 8 FAIL 1
AC008740.1--CRYM-AS1 1 0 1.0 0.0 ONLY_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:109581110:109591110 . YES_LDAS 0.1007 GT 1.7232 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] chr16:21352138-chr16:21315884 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 1
AC006064.4--TNRC18 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC006064.4^ENSG00000269968.1 chr12:6538260:- TNRC18^ENSG00000182095.14 chr7:5345796:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:144025370:144035370 . NO_LDAS 0.1007 GT 1.7465 AG 1.231 ["INTERCHROMOSOMAL[chr12--chr7]"] chr12:6538260-chr7:5345796 False 0 Excluded SpliceType: INCL_NON_REF_SPLICE FAIL 1
AC005062.1--MACC1 1 0 1.0 0.0 ONLY_REF_SPLICE AC005062.1^ENSG00000243004.6 chr7:20028919:- MACC1^ENSG00000183742.13 chr7:20161870:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:3:1101:124524970:124534970 . NO_LDAS 0.1007 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.01Mb]","NEIGHBORS_OVERLAP:-:-:[5798]"] chr7:20028919-chr7:20161870 False 0 Read count too low: 1 < 8 FAIL 1
AC004687.1--LSS 1 0 1.0 0.0 INCL_NON_REF_SPLICE AC004687.1^ENSG00000265206.5 chr17:58332470:- LSS^ENSG00000160285.15 chr21:46213835:- &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:1:1101:112805530:112815530 . YES_LDAS 0.1007 GT 1.7968 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr21]"] chr17:58332470-chr21:46213835 False 0 Read count too low: 1 < 8 FAIL 1
SLC7A5--SMG1P1 1 1 0.5 0.5 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22454702:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:145622540:145632540 &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:4:1101:147387060:147397060 YES_LDAS 0.1006 GT 1.5301 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:65.34Mb]"] chr16:87868885-chr16:22454702 True pair|recurrent breakpoints aih_curated_blacklist score(3) 0 Blacklisted; aih_curated_blacklist score(3) FAIL 2
LRRC37A--NSF 1 1 1.0 1.0 ONLY_REF_SPLICE LRRC37A^ENSG00000176681.14 chr17:46306309:+ NSF^ENSG00000073969.18 chr17:46692903:+ &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:113957890:113967890 &rna_s1221_S42@SYNTHESIZER:1:REGRESSION:2:1101:113741710:113751710 YES_LDAS 0.2014 GT 1.6402 AG 1.9656 ["INTRACHROMOSOMAL[chr17:0.25Mb]"] chr17:46306309-chr17:46692903 True pair|recurrent breakpoints 0 Blacklisted FAIL 2
452 rows