Clear
Retried
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1221_S42) 10s 1s 0s 8s 3.8 MB 97% 1.4 GB 1.4 GB 8.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1221_S42) 34s 2s 24s 8s 3.0 GB 952% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 4s 2s 3m 0s 1m 2s 35.5 GB 961% 46.3 GB 10.1 GB 9.9 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 11s 7s 1m 0s 4s 505.7 MB 197% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1221_S42) 1m 11s 2s 1m 4s 5s 481.4 MB 201% 1.2 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 2m 42s 2s 2m 36s 4s 1.4 GB 257% 1.6 GB 19.3 MB 1.5 GB 19.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) 5s 2s 1s 2s 225.0 MB 316% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) 4s 2s 0s 1s 13.0 MB 1614% 4.6 MB 3.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 13s 2s 7s 4s 24.8 MB 141% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42) 36s 1s 30s 5s 369.9 MB 135% 954.0 MB 940.3 KB 0 bytes 948.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 1m 54s 1s 1m 38s 15s 34.5 GB 156% 1.9 GB 1.0 GB 0 bytes 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 1m 24s 2s 1m 19s 3s 175.3 MB 100% 922.0 MB 453.3 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) 1m 2s 1s 49s 12s 4.8 GB 100% 5.2 GB 66.2 MB 0 bytes 66.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1221_S42) 3m 43s 2s 2m 39s 1m 1s 3.0 GB 234% 2.5 GB 696.4 MB 730.4 MB 696.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1221_S42) 50s 1s 46s 3s 1.0 GB 181% 974.7 MB 28.0 KB 0 bytes 40.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1221_S42) 9s 2s 3s 4s 74.2 MB 357% 55.7 MB 824 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_BAMSTAT (rna_s1221_S42) 41s 1s 36s 4s 47.2 MB 170% 941.1 MB 1.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1221_S42) 4s 2s 0s 1s 0 bytes 84% 74.9 KB 945 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1221_S42) 35s 1s 29s 5s 910.4 MB 226% 170.0 MB 71.3 MB 0 bytes 71.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1221_S42) 45s 2s 31s 12s 779.6 MB 216% 9.7 GB 300.9 MB 7.4 GB 300.9 MB 1
39 items found |
1 2