NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) - gitlab-rnafusion-build2790542-baseline-run-63333303 - Workflow Tracker

Runs
gitlab-rnafu..un-63333303
Tasks
GATK4_MARKDUPLICATES (rna_s1200_S21)

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Task Info

Status: succeeded
Hash: a44c9ca6042a
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: rna_s1200_S21
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: af/83e62b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/83e62be6e09597d51cf2ca1021ee44
Native ID: nf-af83e62be6e09597d51cf2ca1021ee44-a1e47

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 2
Memory (peak / alloc): 39.9 GB / 74.0 GB
Process I/O (rchar / wchar): 1.8 GB / 981.2 MB
Disk I/O (read / write): - / 981.3 MB
Host: i-045d5a9d7ffc39df2 ( spot)

Runtime

Submitted: Jun 03, 2026 7:13:45 PM
Completed: Jun 03, 2026 7:15:47 PM
Total Duration: 2m 1s

Phases

Queue: 14s
Execution: 1m 31s
Stage/Unstage: 16s