nfcore/rnafusion summary report

Databases: COSMIC Mitelman FusionGDB2

Score: 0.625 (explain)

Explained score: 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000)

position: chr4:1806934:+#chr7:98362432:-
junction_reads: 21
spanning_reads: 1
ffmp: 2.2138

position: chr4:1806934#chr7:98362432
reading-frame: in-frame
type: translocation
split_reads1: 17
split_reads2: 2
discordant_mates: 1
coverage1: 75
coverage2: 11
confidence: high

{'starfusion': {'position': 'chr4:1806934:+#chr7:98362432:-', 'junction_reads': 21, 'spanning_reads': 1, 'ffmp': 2.2138}, 'arriba': {'position': 'chr4:1806934#chr7:98362432', 'reading-frame': 'in-frame', 'type': 'translocation', 'split_reads1': '17', 'split_reads2': '2', 'discordant_mates': '1', 'coverage1': '75', 'coverage2': '11', 'confidence': 'high'}}

FGFR3--BAIAP2L1