succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42) 1m 26s 9s 1m 12s 5s 1.1 GB 134% 1.2 GB 1.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 1m 11s 8s 59s 4s 3.4 GB 159% 878.9 MB 149.0 KB 0 bytes 164.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42) 1m 10s 8s 57s 5s 3.4 GB 163% 947.1 MB 152.1 KB 0 bytes 168.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 11s 17s 1m 33s 21s 36.2 GB 166% 1.8 GB 981.2 MB 0 bytes 981.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 2m 20s 23s 1m 36s 21s 34.4 GB 158% 1.9 GB 1.0 GB 0 bytes 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 22s 2s 1m 15s 5s 204.0 MB 100% 853.8 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 1m 26s 2s 1m 19s 5s 173.6 MB 100% 922.0 MB 453.3 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 14.8 MB 98% 1.5 MB 1.2 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42) 4s 2s 0s 1s 14.7 MB 97% 1.5 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1200_S21) 4s 2s 0s 1s 14.7 MB 105% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1221_S42) 4s 2s 0s 1s 14.8 MB 101% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 1m 49s 19s 1m 6s 23s 6.2 GB 405% 10.1 GB 699.2 MB 611.0 MB 83.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42) 1m 48s 20s 1m 4s 23s 7.3 GB 413% 10.4 GB 698.2 MB 613.1 MB 83.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1200_S21) 2s 1s 0s 0s 14.5 MB 3861% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42) 3s 2s 0s 0s 14.7 MB 3937% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 25s 20s 0s 4s 17.9 MB 102% 26.0 MB 2.8 MB 0 bytes 2.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42) 26s 20s 2s 3s 42.9 MB 19% 24.9 MB 2.7 MB 0 bytes 3.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_INTERMEDIATE (run_level_qc) 2s 1s 0s 0s 15.3 MB 101% 1.1 MB 854 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS (run_level_qc) 3s 1s 0s 1s 16.3 MB 93% 1.2 MB 807 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1200_S21) 5s 2s - - 7.4 MB 93% 261.5 MB 41.8 KB 0 bytes 48.0 KB 1
91 items found |
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