Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/3c2543982bb0a16fe9cf2b79d13556/rna_s1200_S21_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/c895a7eebb723bebf8becd4caf290b/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/c895a7eebb723bebf8becd4caf290b/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/3c2543982bb0a16fe9cf2b79d13556/rna_s1200_S21_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/968cc0373a77cd64e5c5233acc4770/rna_s1200_S21.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.fPhvnGDv7R/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary -sample contains 9937706 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir -J /tmp/nxf.fPhvnGDv7R/rna_s1200_S21.Chimeric.out.junction -O /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.fPhvnGDv7R/rna_s1200_S21.Chimeric.out.junction -building interval tree based on /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=80000.00/min [30000], rate=85714.29/min [40000], rate=77419.35/min [50000], rate=76923.08/min [60000], rate=72000.00/min -building interval tree based on /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=60000.00/min [20000], rate=66666.67/min [30000], rate=66666.67/min [40000], rate=64864.86/min [50000], rate=63829.79/min [60000], rate=64285.71/min -building interval tree based on /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=40000.00/min [20000], rate=41379.31/min [30000], rate=48648.65/min [40000], rate=48000.00/min [50000], rate=50000.00/min [60000], rate=52941.18/min -building interval tree based on /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=52173.91/min [30000], rate=51428.57/min [40000], rate=51063.83/min [50000], rate=50847.46/min [60000], rate=51428.57/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir --filt_file /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 3000000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.fPhvnGDv7R/rna_s1200_S21.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -21037.806319 EM: Round [1] log likelihood: -21027.151422 EM: Round [2] log likelihood: -21022.947708 EM: Round [3] log likelihood: -21020.808268 EM: Round [4] log likelihood: -21019.554654 EM: Round [5] log likelihood: -21018.752390 EM: Round [6] log likelihood: -21018.207583 EM: Round [7] log likelihood: -21017.821866 EM: Round [8] log likelihood: -21017.540419 EM: Round [9] log likelihood: -21017.330378 EM: Round [10] log likelihood: -21017.170868 EM: Round [11] log likelihood: -21017.048015 EM: Round [12] log likelihood: -21016.952272 EM: Round [13] log likelihood: -21016.876884 EM: Round [14] log likelihood: -21016.816977 EM: Round [15] log likelihood: -21016.768968 EM: Round [16] log likelihood: -21016.730194 EM: Round [17] log likelihood: -21016.698650 EM: Round [18] log likelihood: -21016.672810 EM: Round [19] log likelihood: -21016.651507 EM: Round [20] log likelihood: -21016.633839 EM: Round [21] log likelihood: -21016.619101 EM: Round [22] log likelihood: -21016.606744 EM: Round [23] log likelihood: -21016.596331 EM: Round [24] log likelihood: -21016.587516 EM: Round [25] log likelihood: -21016.580024 EM: Round [26] log likelihood: -21016.573631 EM: Round [27] log likelihood: -21016.568156 EM: Round [28] log likelihood: -21016.563452 EM: Round [29] log likelihood: -21016.559399 EM: Round [30] log likelihood: -21016.555897 EM: Round [31] log likelihood: -21016.552864 EM: Round [32] log likelihood: -21016.550232 EM: Round [33] log likelihood: -21016.547942 EM: Round [34] log likelihood: -21016.545946 EM: Round [35] log likelihood: -21016.544205 EM: Round [36] log likelihood: -21016.542682 EM: Round [37] log likelihood: -21016.541350 EM: Round [38] log likelihood: -21016.540182 EM: Round [39] log likelihood: -21016.539157 EM: Round [40] log likelihood: -21016.538257 EM: Round [41] log likelihood: -21016.537465 EM: Round [42] log likelihood: -21016.536769 EM: Round [43] log likelihood: -21016.536156 EM: Round [44] log likelihood: -21016.535616 EM: Round [45] log likelihood: -21016.535139 EM: Round [46] log likelihood: -21016.534719 EM: Round [47] log likelihood: -21016.534348 EM: Round [48] log likelihood: -21016.534020 EM: Round [49] log likelihood: -21016.533731 EM: Round [50] log likelihood: -21016.533475 EM: Round [51] log likelihood: -21016.533248 EM: Round [52] log likelihood: -21016.533048 EM: Round [53] log likelihood: -21016.532871 EM: Round [54] log likelihood: -21016.532714 EM: Round [55] log likelihood: -21016.532575 EM: Round [56] log likelihood: -21016.532452 EM: Round [57] log likelihood: -21016.532343 EM: Round [58] log likelihood: -21016.532246 EM: Stopping iterations at round 58 due to insufficient improvement in likelihood. EM: Starting log likelihood: -21035.098497 EM: Round [1] log likelihood: -21025.521070 EM: Round [2] log likelihood: -21021.946700 EM: Round [3] log likelihood: -21020.165161 EM: Round [4] log likelihood: -21019.123511 EM: Round [5] log likelihood: -21018.453443 EM: Round [6] log likelihood: -21017.995134 EM: Round [7] log likelihood: -21017.668271 EM: Round [8] log likelihood: -21017.428064 EM: Round [9] log likelihood: -21017.247536 EM: Round [10] log likelihood: -21017.109457 EM: Round [11] log likelihood: -21017.002326 EM: Round [12] log likelihood: -21016.918195 EM: Round [13] log likelihood: -21016.851425 EM: Round [14] log likelihood: -21016.797934 EM: Round [15] log likelihood: -21016.754713 EM: Round [16] log likelihood: -21016.719517 EM: Round [17] log likelihood: -21016.690649 EM: Round [18] log likelihood: -21016.666813 EM: Round [19] log likelihood: -21016.647012 EM: Round [20] log likelihood: -21016.630468 EM: Round [21] log likelihood: -21016.616574 EM: Round [22] log likelihood: -21016.604848 EM: Round [23] log likelihood: -21016.594909 EM: Round [24] log likelihood: -21016.586450 EM: Round [25] log likelihood: -21016.579225 EM: Round [26] log likelihood: -21016.573031 EM: Round [27] log likelihood: -21016.567706 EM: Round [28] log likelihood: -21016.563115 EM: Round [29] log likelihood: -21016.559146 EM: Round [30] log likelihood: -21016.555707 EM: Round [31] log likelihood: -21016.552722 EM: Round [32] log likelihood: -21016.550125 EM: Round [33] log likelihood: -21016.547862 EM: Round [34] log likelihood: -21016.545886 EM: Round [35] log likelihood: -21016.544160 EM: Round [36] log likelihood: -21016.542649 EM: Round [37] log likelihood: -21016.541324 EM: Round [38] log likelihood: -21016.540163 EM: Round [39] log likelihood: -21016.539143 EM: Round [40] log likelihood: -21016.538246 EM: Round [41] log likelihood: -21016.537457 EM: Round [42] log likelihood: -21016.536763 EM: Round [43] log likelihood: -21016.536151 EM: Round [44] log likelihood: -21016.535612 EM: Round [45] log likelihood: -21016.535137 EM: Round [46] log likelihood: -21016.534717 EM: Round [47] log likelihood: -21016.534346 EM: Round [48] log likelihood: -21016.534019 EM: Round [49] log likelihood: -21016.533730 EM: Round [50] log likelihood: -21016.533474 EM: Round [51] log likelihood: -21016.533248 EM: Round [52] log likelihood: -21016.533048 EM: Round [53] log likelihood: -21016.532870 EM: Round [54] log likelihood: -21016.532714 EM: Round [55] log likelihood: -21016.532575 EM: Round [56] log likelihood: -21016.532452 EM: Round [57] log likelihood: -21016.532343 EM: Round [58] log likelihood: -21016.532246 EM: Stopping iterations at round 58 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 9937706 > /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir > /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir --annotate /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir -done, see /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 494, filtered: 1603) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.fPhvnGDv7R/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.fPhvnGDv7R/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000210082.2] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000284640.1] WARNING, no entry stored in dbm for [ENSG00000233379.2] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000231559.1] WARNING, no entry stored in dbm for [ENSG00000256847.1] WARNING, no entry stored in dbm for [ENSG00000267736.2] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000180438.15] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000248660.1] WARNING, no entry stored in dbm for [ENSG00000228004.1] WARNING, no entry stored in dbm for [ENSG00000249072.1] WARNING, no entry stored in dbm for [ENSG00000259479.6] WARNING, no entry stored in dbm for [ENSG00000259479.6] WARNING, no entry stored in dbm for [ENSG00000285898.1] WARNING, no entry stored in dbm for [ENSG00000242207.1] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000213332.4] WARNING, no entry stored in dbm for [ENSG00000131002.12] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000196183.5] WARNING, no entry stored in dbm for [ENSG00000244099.1] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237401.8] WARNING, no entry stored in dbm for [ENSG00000234524.1] WARNING, no entry stored in dbm for [ENSG00000229824.1] WARNING, no entry stored in dbm for [ENSG00000234083.1] WARNING, no entry stored in dbm for [ENSG00000274210.1] WARNING, no entry stored in dbm for [ENSG00000204352.4] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000266227.1] WARNING, no entry stored in dbm for [ENSG00000232117.2] WARNING, no entry stored in dbm for [ENSG00000261673.1] WARNING, no entry stored in dbm for [ENSG00000227827.3] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000278733.1] WARNING, no entry stored in dbm for [ENSG00000251504.1] WARNING, no entry stored in dbm for [ENSG00000226232.8] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000239523.6] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000238141.2] WARNING, no entry stored in dbm for [ENSG00000234546.4] WARNING, no entry stored in dbm for [ENSG00000251323.3] WARNING, no entry stored in dbm for [ENSG00000205786.8] WARNING, no entry stored in dbm for [ENSG00000241769.7] WARNING, no entry stored in dbm for [ENSG00000261144.1] WARNING, no entry stored in dbm for [ENSG00000249332.2] WARNING, no entry stored in dbm for [ENSG00000227195.11] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000250961.2] WARNING, no entry stored in dbm for [ENSG00000259683.1] WARNING, no entry stored in dbm for [ENSG00000237437.1] WARNING, no entry stored in dbm for [ENSG00000287672.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000203364.2] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000249072.1] WARNING, no entry stored in dbm for [ENSG00000268001.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000235531.11] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000247137.9] WARNING, no entry stored in dbm for [ENSG00000227885.3] WARNING, no entry stored in dbm for [ENSG00000275419.1] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000244733.5] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000227195.11] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000287188.1] WARNING, no entry stored in dbm for [ENSG00000267040.6] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000286122.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000262966.2] WARNING, no entry stored in dbm for [ENSG00000265206.5] WARNING, no entry stored in dbm for [ENSG00000265206.5] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] * STAR-Fusion complete. See output: /tmp/nxf.fPhvnGDv7R/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)