nfcore/rnafusion summary report

Databases: COSMIC Mitelman FusionGDB2

Score: 0.625 (explain)

Explained score: 0.5 * (0.125 + 0.125) + 0.5 * (0.500 + 0.500 + 0.000)

position: chr2:113235394:-#chr3:12379704:+
junction_reads: 19
spanning_reads: 0
ffmp: 1.913

position: chr2:113235394#chr3:12379704
reading-frame: in-frame
type: translocation
split_reads1: 10
split_reads2: 9
discordant_mates: 0
coverage1: 27
coverage2: 23
confidence: high

{'starfusion': {'position': 'chr2:113235394:-#chr3:12379704:+', 'junction_reads': 19, 'spanning_reads': 0, 'ffmp': 1.913}, 'arriba': {'position': 'chr2:113235394#chr3:12379704', 'reading-frame': 'in-frame', 'type': 'translocation', 'split_reads1': '10', 'split_reads2': '9', 'discordant_mates': '0', 'coverage1': '27', 'coverage2': '23', 'confidence': 'high'}}

PAX8--PPARG