Clear
Retried
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) 7s 4s 1s 2s 16.1 MB 936% 44.3 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ (rna_s1221_S42) 11s 2s 0s 8s 3.9 MB 97% 1.4 GB 1.4 GB 12.0 KB 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) 4s 3s 0s 0s 19.2 MB 4418% 4.6 MB 3.7 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1221_S42) 59s 1s 54s 4s 492.8 MB 197% 1.2 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 1m 38s 2s 1m 27s 9s 1.4 GB 301% 1.6 GB 19.3 MB 1.5 GB 19.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 6s 3s 2m 59s 1m 4s 35.5 GB 948% 46.3 GB 10.1 GB 8.6 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1221_S42) 30s 2s 22s 6s 2.8 GB 863% 1.4 GB 1.2 GB 0 bytes 1.2 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 10s 11s 56s 3s 489.3 MB 198% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1221_S42) 58s 1s 31s 26s 782.1 MB 222% 9.7 GB 300.8 MB 7.1 GB 300.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 1m 45s 12s 10s 1m 22s 577.5 MB 280% 257.8 MB 28.0 MB 195.7 MB 28.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 1m 25s 1s 1m 19s 5s 174.2 MB 100% 922.0 MB 453.3 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1221_S42) 3s 2s 0s 0s 14.4 MB 97% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER (rna_s1221_S42) 4s 2s 0s 1s 14.8 MB 2127% 38.7 MB 137.4 KB 0 bytes 156.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1221_S42) 4m 17s 1s 2m 32s 1m 43s 2.9 GB 248% 2.5 GB 696.4 MB 767.2 MB 696.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 14s 3s 6s 5s 23.5 MB 143% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) 1m 35s 24s 51s 20s 4.8 GB 100% 5.2 GB 66.2 MB 0 bytes 66.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 2m 1s 1s 1m 34s 26s 42.6 GB 160% 1.9 GB 1.0 GB 0 bytes 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42) 5s 3s 0s 1s 16.7 MB 3780% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION_FILTER (rna_s1221_S42) 1m 50s 1s 1m 46s 2s 7.9 GB 115% 94.6 MB 258.5 KB 0 bytes 264.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1221_S42) 8s 1s 2s 5s 72.3 MB 1732% 55.7 MB 825 bytes 0 bytes 12.0 KB 1
37 items found |
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