.command.sh - Workdir - NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS (run_level_qc)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/3d93dce92d673a5bc0e501632f730b/.command.sh
Size: 252 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS (run_level_qc)
Attempt

Content

#!/bin/bash -euo pipefail
run_level_metrics.py \
    --intermediate run_level_intermediate.tsv \
    -o run_level_metrics.tsv

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS":
    run_level_metrics: 1.1.0
END_VERSIONS