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.command.begin
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.command.err
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.command.run
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.command.sh
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.command.yaml
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.exitcode
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multiqc_data/junction_saturation_known.txt
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493 bytes |
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multiqc_data/junction_saturation_novel.txt
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451 bytes |
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multiqc_data/multiqc.log
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multiqc_data/multiqc_citations.txt
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360 bytes |
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multiqc_data/multiqc_data.json
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3.9 MB |
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multiqc_data/multiqc_fastp.txt
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multiqc_data/multiqc_fastqc.txt
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multiqc_data/multiqc_fastqc_1.txt
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multiqc_data/multiqc_general_stats.tsv
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multiqc_data/multiqc_general_stats.txt
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multiqc_data/multiqc_kallisto.txt
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233 bytes |
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multiqc_data/multiqc_picard_dups.txt
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431 bytes |
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multiqc_data/multiqc_rseqc_bam_stat.txt
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637 bytes |
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multiqc_data/multiqc_rseqc_infer_experiment.txt
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104 bytes |
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multiqc_data/multiqc_rseqc_junction_annotation.txt
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755 bytes |
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multiqc_data/multiqc_rseqc_read_distribution.txt
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multiqc_data/multiqc_software_versions.txt
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multiqc_data/multiqc_sources.txt
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multiqc_data/multiqc_star.txt
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881 bytes |
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multiqc_data/picard_histogram.txt
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multiqc_data/picard_histogram_1.txt
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multiqc_data/picard_histogram_2.txt
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multiqc_data/preseq.txt
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multiqc_data/rseqc_inner_distance.txt
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multiqc_data/rseqc_junction_saturation_all.txt
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multiqc_data/rseqc_read_dups.txt
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nextflow-bin/__pycache__/multiqc_column_order.cpython-311.pyc
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nextflow-bin/bclconvert_to_sample_type_map.py
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nextflow-bin/cancer_introns_to_vcf.py
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nextflow-bin/contamination_to_multiqc.py
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nextflow-bin/demux_by_sample.py
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nextflow-bin/expression_qc_and_signatures.py
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nextflow-bin/extract_vaf_features.py
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nextflow-bin/filter_arriba_main.py
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nextflow-bin/filter_starfusion_main.py
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nextflow-bin/flowcell_qc.py
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nextflow-bin/get_rrna_transcripts.py
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nextflow-bin/gtf2bed
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nextflow-bin/kallisto_to_multiqc.py
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nextflow-bin/lib/__init__.py
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nextflow-bin/lib/aih_curated_blacklist.py
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nextflow-bin/lib/filter_arriba_from_config.py
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nextflow-bin/lib/filter_starfusions_from_config.py
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nextflow-bin/lib/flag_starfusions_blacklist.py
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nextflow-bin/migrate_containers_to_ecr.sh
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nextflow-bin/multiqc_column_order.py
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nextflow-bin/multiqc_general_stats_controls.py
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nextflow-bin/multiqc_general_stats_to_tsv.py
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nextflow-bin/multiqc_general_stats_txt_to_json.py
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nextflow-bin/predict_contamination.py
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nextflow-bin/preseq_to_multiqc.py
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nextflow-bin/rseqc_to_multiqc.py
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nextflow-bin/run_level_intermediate.py
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nextflow-bin/run_level_metrics.py
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nextflow-bin/run_ngscheckmate.sh
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nextflow-bin/seqtool_to_multiqc.py
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nextflow-bin/sort_fusion_vcf_mateid.py
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nextflow-bin/starfusion_filter_summary.txt
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nextflow-bin/vcf_collect.py
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versions.yml
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