.command.sh - Workdir - NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:AGGREGATE_DEMUX_STATS (REGRESSION)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/64/7f1e0bc4927b2d28dbc87db11d6b90/.command.sh
Size: 305 bytes
Task: NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:AGGREGATE_DEMUX_STATS (REGRESSION)
Attempt

Content

#!/bin/bash -euo pipefail
demux_by_sample.py \
    ds*/* \
    -o Demultiplex_Stats_aggregate.csv

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:AGGREGATE_DEMUX_STATS":
    python: $(python --version | sed 's/Python //g')
    demux_stats_aggregate: 1.0.0
END_VERSIONS