succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42) 1m 17s 1s 1m 12s 4s 1.1 GB 136% 1.2 GB 1.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 1m 3s 1s 58s 4s 3.4 GB 161% 878.9 MB 149.0 KB 0 bytes 164.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42) 1m 3s 1s 58s 4s 3.3 GB 163% 947.1 MB 152.1 KB 0 bytes 168.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 23s 22s 1m 36s 25s 45.0 GB 162% 1.8 GB 981.2 MB 0 bytes 981.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 2m 1s 1s 1m 34s 26s 42.6 GB 160% 1.9 GB 1.0 GB 0 bytes 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 21s 1s 1m 16s 4s 202.6 MB 100% 853.8 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 1m 25s 1s 1m 19s 5s 174.2 MB 100% 922.0 MB 453.3 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21) 2s 1s 0s 0s 14.8 MB 94% 1.5 MB 1.2 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42) 2s 1s 0s 0s 14.7 MB 95% 1.5 MB 1.2 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 14.8 MB 146% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC (rna_s1221_S42) 3s 2s 0s 0s 14.4 MB 97% 1.2 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 1m 29s 1s 1m 4s 23s 6.2 GB 417% 10.1 GB 699.2 MB 714.4 MB 83.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42) 1m 32s 1s 1m 4s 26s 6.2 GB 410% 10.4 GB 698.2 MB 792.6 MB 83.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1200_S21) 5s 3s 0s 1s 15.3 MB 3865% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42) 5s 3s 0s 1s 16.7 MB 3780% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 8s 1s 1s 5s 47.0 MB 25% 26.0 MB 2.8 MB 0 bytes 3.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42) 9s 1s 0s 7s 17.6 MB 98% 24.9 MB 2.7 MB 0 bytes 2.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_INTERMEDIATE (run_level_qc) 3s 1s 0s 1s 15.3 MB 100% 1.1 MB 848 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS (run_level_qc) 5s 3s 0s 1s 12.9 MB 109% 1.2 MB 809 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1200_S21) 3s 1s - - 7.5 MB 94% 261.5 MB 41.9 KB 0 bytes 48.0 KB 1
91 items found |
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