|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_Blood)
|
20s |
4s |
6s |
10s |
127.5 MB |
141% |
174.0 MB |
84.4 MB |
0 bytes |
84.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_tissue)
|
40s |
3s |
27s |
10s |
131.0 MB |
157% |
756.0 MB |
327.0 MB |
0 bytes |
327.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_44120631-44120778)
|
23s |
3s |
10s |
10s |
767.5 MB |
228% |
195.6 MB |
22.3 MB |
0 bytes |
22.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_5117103-5117231)
|
52s |
16s |
26s |
10s |
1.1 GB |
155% |
218.8 MB |
80.9 MB |
0 bytes |
81.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_44120631-44120778)
|
35s |
3s |
23s |
9s |
844.4 MB |
166% |
210.2 MB |
71.1 MB |
0 bytes |
71.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 13s |
3s |
1m 1s |
9s |
862.7 MB |
130% |
263.7 MB |
218.5 MB |
0 bytes |
218.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_44120631-44120778)
|
24s |
3s |
12s |
9s |
960.0 MB |
204% |
197.3 MB |
27.4 MB |
0 bytes |
27.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_5117103-5117231)
|
46s |
3s |
33s |
10s |
773.9 MB |
146% |
226.7 MB |
102.3 MB |
0 bytes |
102.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_44120631-44120778)
|
51s |
2s |
39s |
10s |
865.1 MB |
141% |
229.0 MB |
132.9 MB |
0 bytes |
132.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_5117103-5117231)
|
3m 6s |
14s |
2m 41s |
11s |
789.8 MB |
116% |
387.9 MB |
578.9 MB |
0 bytes |
579.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_44120631-44120778)
|
1m 37s |
1m 5s |
11s |
21s |
928.4 MB |
256% |
167.6 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_5117103-5117231)
|
1m 49s |
1m 5s |
24s |
20s |
806.7 MB |
181% |
238.6 MB |
802.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_44120631-44120778)
|
1m 43s |
1m 4s |
19s |
20s |
831.4 MB |
206% |
182.3 MB |
801.5 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_5117103-5117231)
|
2m 8s |
1m 4s |
43s |
21s |
869.0 MB |
147% |
283.5 MB |
802.9 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_44120631-44120778)
|
1m 36s |
1m 3s |
13s |
20s |
1022.6 MB |
229% |
169.3 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_5117103-5117231)
|
1m 53s |
1m 3s |
29s |
21s |
910.6 MB |
166% |
246.5 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_44120631-44120778)
|
54s |
14s |
29s |
11s |
796.3 MB |
164% |
201.0 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_5117103-5117231)
|
2m 8s |
14s |
1m 43s |
11s |
860.5 MB |
124% |
407.7 MB |
803.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
22s |
18s |
2s |
2s |
241.1 MB |
352% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_tumor)
|
6s |
2s |
2s |
2s |
243.8 MB |
350% |
95.6 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |