|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_Blood)
|
20s |
2s |
7s |
11s |
127.1 MB |
149% |
174.0 MB |
84.4 MB |
0 bytes |
84.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_tissue)
|
41s |
4s |
27s |
10s |
132.0 MB |
158% |
756.1 MB |
327.0 MB |
0 bytes |
327.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_44120631-44120778)
|
22s |
2s |
10s |
10s |
773.9 MB |
229% |
195.6 MB |
22.3 MB |
0 bytes |
22.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_5117103-5117231)
|
39s |
3s |
26s |
10s |
812.8 MB |
157% |
218.8 MB |
80.9 MB |
0 bytes |
81.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_44120631-44120778)
|
34s |
2s |
23s |
9s |
780.4 MB |
165% |
210.2 MB |
71.1 MB |
0 bytes |
71.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 13s |
3s |
59s |
11s |
848.4 MB |
129% |
263.7 MB |
218.5 MB |
0 bytes |
218.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_44120631-44120778)
|
24s |
2s |
12s |
10s |
809.3 MB |
218% |
197.3 MB |
27.4 MB |
0 bytes |
27.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_5117103-5117231)
|
44s |
2s |
32s |
10s |
792.8 MB |
148% |
226.7 MB |
102.3 MB |
0 bytes |
102.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_44120631-44120778)
|
53s |
2s |
41s |
10s |
808.9 MB |
141% |
229.0 MB |
132.9 MB |
0 bytes |
132.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_5117103-5117231)
|
3m 3s |
3s |
2m 50s |
10s |
983.4 MB |
117% |
388.0 MB |
578.9 MB |
0 bytes |
579.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_44120631-44120778)
|
24s |
2s |
9s |
13s |
854.7 MB |
257% |
167.6 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_5117103-5117231)
|
36s |
2s |
21s |
13s |
804.0 MB |
167% |
238.6 MB |
802.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_44120631-44120778)
|
32s |
3s |
16s |
13s |
903.8 MB |
190% |
182.3 MB |
801.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_5117103-5117231)
|
55s |
3s |
37s |
15s |
890.4 MB |
142% |
283.5 MB |
802.9 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_44120631-44120778)
|
24s |
2s |
10s |
12s |
818.2 MB |
235% |
169.3 MB |
801.4 KB |
0 bytes |
832.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_5117103-5117231)
|
42s |
3s |
27s |
12s |
818.0 MB |
156% |
246.5 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_44120631-44120778)
|
40s |
2s |
26s |
12s |
1008.8 MB |
152% |
201.0 MB |
802.8 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_5117103-5117231)
|
1m 59s |
2s |
1m 45s |
12s |
1.4 GB |
116% |
407.7 MB |
803.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
7s |
3s |
3s |
1s |
212.9 MB |
339% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_tumor)
|
7s |
3s |
3s |
1s |
204.9 MB |
328% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |