|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_Blood)
|
19s |
3s |
7s |
9s |
128.3 MB |
143% |
174.1 MB |
84.4 MB |
0 bytes |
84.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_tissue)
|
39s |
2s |
27s |
10s |
131.7 MB |
152% |
756.0 MB |
327.0 MB |
0 bytes |
327.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_44120631-44120778)
|
24s |
3s |
11s |
10s |
1.1 GB |
220% |
195.5 MB |
22.3 MB |
4.0 MB |
22.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_5117103-5117231)
|
54s |
17s |
26s |
11s |
858.2 MB |
152% |
218.8 MB |
80.9 MB |
0 bytes |
81.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_44120631-44120778)
|
39s |
2s |
24s |
13s |
952.6 MB |
161% |
210.2 MB |
71.1 MB |
4.0 KB |
71.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 13s |
2s |
1m 1s |
10s |
798.5 MB |
128% |
263.7 MB |
218.5 MB |
4.0 KB |
218.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_44120631-44120778)
|
40s |
17s |
12s |
11s |
1.2 GB |
207% |
197.3 MB |
27.4 MB |
5.1 MB |
27.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_5117103-5117231)
|
49s |
2s |
32s |
15s |
878.7 MB |
144% |
226.7 MB |
102.3 MB |
4.0 KB |
102.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_44120631-44120778)
|
55s |
2s |
41s |
12s |
836.9 MB |
133% |
229.0 MB |
132.9 MB |
4.0 KB |
132.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_5117103-5117231)
|
3m 12s |
3s |
2m 56s |
13s |
1.2 GB |
111% |
387.9 MB |
578.9 MB |
217.5 MB |
579.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_44120631-44120778)
|
26s |
2s |
12s |
12s |
899.7 MB |
259% |
167.6 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_5117103-5117231)
|
36s |
2s |
22s |
12s |
1.3 GB |
176% |
238.6 MB |
802.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_44120631-44120778)
|
32s |
3s |
16s |
13s |
931.5 MB |
199% |
182.3 MB |
801.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_5117103-5117231)
|
55s |
2s |
40s |
13s |
836.5 MB |
144% |
283.5 MB |
802.9 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_44120631-44120778)
|
24s |
2s |
11s |
11s |
888.4 MB |
241% |
169.3 MB |
801.4 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_5117103-5117231)
|
41s |
2s |
28s |
11s |
856.2 MB |
166% |
246.5 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_44120631-44120778)
|
42s |
2s |
27s |
13s |
901.2 MB |
164% |
201.0 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_5117103-5117231)
|
1m 56s |
3s |
1m 42s |
11s |
907.2 MB |
123% |
407.7 MB |
803.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
8s |
3s |
3s |
2s |
227.3 MB |
322% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_tumor)
|
8s |
3s |
3s |
2s |
233.9 MB |
321% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |