|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_Blood)
|
19s |
2s |
7s |
10s |
128.2 MB |
147% |
174.1 MB |
84.4 MB |
0 bytes |
84.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_tissue)
|
39s |
3s |
26s |
10s |
132.2 MB |
156% |
756.1 MB |
327.0 MB |
0 bytes |
327.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_44120631-44120778)
|
23s |
3s |
10s |
10s |
903.1 MB |
214% |
195.6 MB |
22.3 MB |
0 bytes |
22.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_5117103-5117231)
|
40s |
2s |
28s |
10s |
1.0 GB |
150% |
218.8 MB |
80.9 MB |
27.8 MB |
81.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_44120631-44120778)
|
35s |
2s |
24s |
9s |
734.4 MB |
159% |
210.2 MB |
71.1 MB |
0 bytes |
71.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 21s |
3s |
1m 8s |
10s |
1.3 GB |
125% |
263.7 MB |
218.5 MB |
82.8 MB |
218.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_44120631-44120778)
|
25s |
3s |
12s |
10s |
710.6 MB |
201% |
197.3 MB |
27.4 MB |
0 bytes |
27.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_5117103-5117231)
|
52s |
3s |
37s |
12s |
974.3 MB |
140% |
226.7 MB |
102.3 MB |
41.1 MB |
102.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_44120631-44120778)
|
54s |
3s |
41s |
10s |
740.6 MB |
135% |
229.0 MB |
132.9 MB |
4.0 KB |
132.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_5117103-5117231)
|
3m 2s |
3s |
2m 48s |
11s |
950.2 MB |
111% |
387.9 MB |
578.9 MB |
161.7 MB |
579.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_44120631-44120778)
|
28s |
2s |
10s |
16s |
904.6 MB |
252% |
167.6 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_5117103-5117231)
|
39s |
2s |
23s |
14s |
892.2 MB |
168% |
238.6 MB |
802.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_44120631-44120778)
|
33s |
3s |
18s |
12s |
940.3 MB |
192% |
182.3 MB |
801.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_5117103-5117231)
|
56s |
3s |
40s |
13s |
912.6 MB |
143% |
283.5 MB |
802.9 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_44120631-44120778)
|
25s |
3s |
11s |
11s |
1.2 GB |
237% |
169.3 MB |
801.4 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_5117103-5117231)
|
43s |
3s |
28s |
12s |
899.1 MB |
161% |
246.5 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_44120631-44120778)
|
43s |
3s |
27s |
13s |
930.9 MB |
159% |
201.0 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_5117103-5117231)
|
2m 11s |
5s |
1m 55s |
11s |
954.6 MB |
121% |
407.7 MB |
803.8 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
9s |
4s |
3s |
2s |
212.1 MB |
292% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_tumor)
|
8s |
4s |
3s |
1s |
214.9 MB |
316% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |