|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_Blood)
|
18s |
2s |
7s |
9s |
126.8 MB |
141% |
174.1 MB |
84.4 MB |
0 bytes |
84.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:CRAM_MERGE_INDEX_SAMTOOLS:MERGE_CRAM (Sig_18_tissue)
|
39s |
3s |
25s |
11s |
131.5 MB |
155% |
756.1 MB |
327.0 MB |
0 bytes |
327.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_44120631-44120778)
|
25s |
3s |
10s |
12s |
739.2 MB |
207% |
195.6 MB |
22.3 MB |
0 bytes |
22.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_BL;chr21_5117103-5117231)
|
41s |
2s |
27s |
12s |
996.5 MB |
147% |
218.8 MB |
80.9 MB |
20.4 MB |
81.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_44120631-44120778)
|
35s |
2s |
23s |
10s |
982.4 MB |
156% |
210.2 MB |
71.1 MB |
280.0 KB |
71.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (HCC1395_tumor;chr21_5117103-5117231)
|
1m 16s |
3s |
1m 0s |
13s |
846.4 MB |
125% |
263.7 MB |
218.5 MB |
4.0 KB |
218.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_44120631-44120778)
|
27s |
2s |
13s |
12s |
1003.1 MB |
176% |
197.3 MB |
27.4 MB |
5.6 MB |
27.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_Blood;chr21_5117103-5117231)
|
47s |
2s |
33s |
12s |
755.1 MB |
140% |
226.7 MB |
102.3 MB |
0 bytes |
102.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_44120631-44120778)
|
53s |
3s |
39s |
11s |
850.6 MB |
133% |
229.0 MB |
132.9 MB |
4.0 KB |
132.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_APPLYBQSR:GATK4_APPLYBQSR (Sig_18_tissue;chr21_5117103-5117231)
|
2m 50s |
2s |
2m 37s |
11s |
768.4 MB |
112% |
387.9 MB |
578.9 MB |
32.2 MB |
579.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_44120631-44120778)
|
29s |
3s |
10s |
16s |
971.6 MB |
249% |
167.6 MB |
801.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_BL;chr21_5117103-5117231)
|
40s |
3s |
21s |
16s |
958.6 MB |
176% |
238.6 MB |
802.6 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_44120631-44120778)
|
37s |
3s |
16s |
18s |
854.8 MB |
193% |
182.3 MB |
801.5 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (HCC1395_tumor;chr21_5117103-5117231)
|
59s |
3s |
38s |
18s |
862.1 MB |
143% |
283.5 MB |
803.0 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_44120631-44120778)
|
30s |
3s |
10s |
17s |
835.2 MB |
237% |
169.3 MB |
801.4 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_Blood;chr21_5117103-5117231)
|
45s |
2s |
26s |
17s |
931.5 MB |
159% |
246.5 MB |
802.7 KB |
0 bytes |
820.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_44120631-44120778)
|
42s |
2s |
26s |
14s |
992.0 MB |
158% |
201.0 MB |
802.8 KB |
0 bytes |
844.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_BASERECALIBRATOR (Sig_18_tissue;chr21_5117103-5117231)
|
1m 55s |
2s |
1m 39s |
14s |
919.4 MB |
119% |
407.7 MB |
803.6 KB |
0 bytes |
848.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_BL)
|
6s |
2s |
3s |
1s |
211.5 MB |
332% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_BASERECALIBRATOR:GATK4_GATHERBQSRREPORTS (HCC1395_tumor)
|
6s |
2s |
3s |
1s |
216.5 MB |
339% |
95.5 MB |
797.4 KB |
0 bytes |
800.0 KB |
1 |