|
succeeded
|
NFCORE_SAREK:PUBLISH_INPUT_SAMPLESHEET (input_samplesheet)
|
4s |
2s |
0s |
1s |
0 bytes |
91% |
129.5 KB |
4.9 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:AGGREGATE_VARIANT_QC (variant_qc_aggregation)
|
21s |
14s |
0s |
6s |
14.7 MB |
104% |
2.4 MB |
23.6 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (869_BIT-N1-BDNA-1_B23H3TCLT3_1)
|
17s |
1s |
3s |
12s |
684.2 MB |
6821% |
1.7 GB |
7.7 MB |
0 bytes |
30.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (869_BU7-N1-BDNA-1_B23H3TCLT3_1)
|
15s |
1s |
3s |
10s |
611.7 MB |
6250% |
1.2 GB |
4.7 MB |
0 bytes |
27.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (869_ELU-N1-BDNA-1_B23H3TCLT3_1)
|
16s |
1s |
3s |
11s |
606.5 MB |
5575% |
1.2 GB |
4.6 MB |
0 bytes |
27.8 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNFILTER (869_WTZ-N1-BDNA-1_B23H3TCLT3_1)
|
18s |
1s |
3s |
13s |
616.6 MB |
6486% |
1.3 GB |
5.5 MB |
0 bytes |
28.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (869_BIT-N1-BDNA-1_B23H3TCLT3_1)
|
15m 53s |
2s |
13m 27s |
2m 23s |
2.2 GB |
1129% |
100.3 GB |
74.5 MB |
30.7 GB |
759.7 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (869_BU7-N1-BDNA-1_B23H3TCLT3_1)
|
8m 52s |
2s |
6m 54s |
1m 55s |
1.5 GB |
1119% |
87.7 GB |
51.8 MB |
26.7 GB |
739.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (869_ELU-N1-BDNA-1_B23H3TCLT3_1)
|
9m 34s |
2s |
7m 47s |
1m 44s |
1.5 GB |
1117% |
80.7 GB |
46.1 MB |
23.5 GB |
734.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BAM_VARIANT_CALLING_TUMOR_ONLY_TNSEQ:SENTIEON_TNHAPLOTYPER2 (869_WTZ-N1-BDNA-1_B23H3TCLT3_1)
|
14m 58s |
1s |
12m 1s |
2m 55s |
2.7 GB |
1136% |
126.0 GB |
77.5 MB |
39.8 GB |
765.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (869_BIT-N1-BDNA-1_B23H3TCLT3_1;tnseq)
|
3s |
1s |
- |
- |
22.5 MB |
8273% |
139.6 KB |
25.6 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (869_BU7-N1-BDNA-1_B23H3TCLT3_1;tnseq)
|
3s |
1s |
- |
- |
23.3 MB |
8272% |
135.4 KB |
22.4 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (869_ELU-N1-BDNA-1_B23H3TCLT3_1;tnseq)
|
3s |
2s |
- |
- |
22.1 MB |
7561% |
136.4 KB |
23.5 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (869_WTZ-N1-BDNA-1_B23H3TCLT3_1;tnseq)
|
3s |
1s |
- |
- |
22.0 MB |
7553% |
135.9 KB |
23.2 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (869_BIT-N1-BDNA-1_B23H3TCLT3_1)
|
18s |
2s |
7s |
8s |
44.3 MB |
282% |
3.6 GB |
6.1 MB |
0 bytes |
6.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (869_BU7-N1-BDNA-1_B23H3TCLT3_1)
|
19s |
3s |
7s |
8s |
43.0 MB |
281% |
3.4 GB |
3.6 MB |
0 bytes |
3.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (869_ELU-N1-BDNA-1_B23H3TCLT3_1)
|
19s |
2s |
7s |
9s |
43.9 MB |
282% |
3.4 GB |
3.4 MB |
0 bytes |
3.5 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_NORM (869_WTZ-N1-BDNA-1_B23H3TCLT3_1)
|
18s |
2s |
7s |
8s |
43.6 MB |
282% |
3.5 GB |
4.3 MB |
0 bytes |
4.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (869_BIT-N1-BDNA-1_B23H3TCLT3_1)
|
3s |
1s |
1s |
1s |
21.5 MB |
2296% |
43.3 MB |
43.3 MB |
0 bytes |
43.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:HARMONIZE_CHIP_CANDIDATES:BCFTOOLS_SORT (869_BU7-N1-BDNA-1_B23H3TCLT3_1)
|
3s |
1s |
1s |
1s |
24.7 MB |
3524% |
27.2 MB |
27.2 MB |
0 bytes |
27.2 MB |
1 |