|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (HCC1395_BL)
|
4s |
2s |
0s |
1s |
16.0 MB |
2562% |
12.9 MB |
55.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (Sig_18_Blood)
|
4s |
2s |
0s |
1s |
20.5 MB |
2484% |
12.9 MB |
64.8 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL)
|
13s |
3s |
0s |
9s |
3.6 MB |
115% |
922.8 KB |
672.0 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (Sig_18_Blood)
|
28s |
18s |
0s |
9s |
3.8 MB |
102% |
922.9 KB |
672.1 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL;sentieon_haplotyper_rf)
|
3s |
2s |
- |
- |
3.3 MB |
82% |
149.1 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (Sig_18_Blood;sentieon_haplotyper_rf)
|
3s |
2s |
- |
- |
3.3 MB |
176% |
151.5 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)
|
29s |
19s |
0s |
9s |
26.3 MB |
8298% |
11.5 MB |
74.1 KB |
280.0 KB |
88.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (Sig_18_Blood)
|
35s |
26s |
0s |
8s |
27.3 MB |
7746% |
11.5 MB |
82.9 KB |
336.0 KB |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;tnseq)
|
40s |
13s |
22s |
5s |
5.4 GB |
915% |
170.9 MB |
3.3 MB |
0 bytes |
472.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;tnseq)
|
41s |
14s |
22s |
5s |
5.2 GB |
802% |
170.9 MB |
3.4 MB |
0 bytes |
536.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)
|
7s |
6s |
- |
- |
3.1 MB |
95% |
480.2 KB |
45.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;tnseq)
|
7s |
6s |
- |
- |
3.3 MB |
138% |
513.2 KB |
51.2 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL)
|
5s |
2s |
1s |
1s |
379.6 MB |
1110% |
16.5 MB |
50.3 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood)
|
5s |
2s |
1s |
1s |
383.6 MB |
1104% |
16.5 MB |
57.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL)
|
11s |
8s |
0s |
2s |
20.7 MB |
4428% |
11.2 MB |
50.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood)
|
10s |
7s |
0s |
2s |
20.4 MB |
4435% |
11.2 MB |
57.8 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL)
|
1m 53s |
1m 16s |
28s |
9s |
3.8 GB |
247% |
1.1 GB |
69.7 MB |
0 bytes |
51.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_Blood)
|
1m 56s |
1m 16s |
30s |
10s |
3.6 GB |
237% |
1.3 GB |
69.8 MB |
0 bytes |
52.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_BL)
|
19s |
15s |
3s |
1s |
140.8 MB |
989% |
75.3 MB |
69.5 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (Sig_18_Blood)
|
17s |
14s |
3s |
0s |
163.4 MB |
1173% |
75.3 MB |
69.5 KB |
0 bytes |
84.0 KB |
1 |