|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (HCC1395_BL)
|
25s |
21s |
1s |
2s |
14.5 MB |
1675% |
12.9 MB |
55.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (Sig_18_Blood)
|
25s |
21s |
1s |
2s |
35.2 MB |
1900% |
13.0 MB |
64.8 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL)
|
18s |
8s |
0s |
9s |
3.6 MB |
132% |
923.6 KB |
672.0 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (Sig_18_Blood)
|
18s |
8s |
0s |
9s |
3.5 MB |
111% |
923.7 KB |
672.1 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL;sentieon_haplotyper_rf)
|
3s |
2s |
- |
- |
3.3 MB |
89% |
149.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (Sig_18_Blood;sentieon_haplotyper_rf)
|
3s |
2s |
1s |
0s |
3.3 MB |
132% |
152.1 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)
|
54s |
41s |
0s |
12s |
27.1 MB |
4216% |
11.5 MB |
74.1 KB |
132.0 KB |
88.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (Sig_18_Blood)
|
54s |
41s |
0s |
12s |
21.6 MB |
4531% |
11.5 MB |
82.9 KB |
272.0 KB |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;tnseq)
|
30s |
2s |
25s |
3s |
6.1 GB |
1107% |
170.9 MB |
3.3 MB |
0 bytes |
484.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;tnseq)
|
31s |
2s |
26s |
3s |
6.8 GB |
784% |
170.9 MB |
3.4 MB |
0 bytes |
540.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)
|
5s |
4s |
- |
- |
3.3 MB |
94% |
482.0 KB |
45.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;tnseq)
|
5s |
4s |
- |
- |
3.3 MB |
101% |
515.0 KB |
51.2 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL)
|
50s |
47s |
1s |
1s |
383.5 MB |
1136% |
16.5 MB |
50.3 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood)
|
21s |
18s |
1s |
1s |
387.1 MB |
1098% |
16.5 MB |
57.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL)
|
5s |
3s |
0s |
1s |
21.7 MB |
4408% |
11.2 MB |
50.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood)
|
4s |
2s |
0s |
1s |
23.2 MB |
4528% |
11.2 MB |
57.8 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL)
|
45s |
5s |
30s |
10s |
4.1 GB |
238% |
1.1 GB |
69.7 MB |
0 bytes |
51.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_Blood)
|
47s |
5s |
32s |
10s |
3.6 GB |
244% |
1.3 GB |
69.8 MB |
0 bytes |
52.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_BL)
|
6s |
2s |
3s |
1s |
144.6 MB |
956% |
75.3 MB |
69.5 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (Sig_18_Blood)
|
6s |
2s |
3s |
1s |
153.7 MB |
1001% |
75.3 MB |
69.5 KB |
0 bytes |
84.0 KB |
1 |