|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (HCC1395_BL)
|
5s |
2s |
1s |
1s |
14.2 MB |
1930% |
12.9 MB |
55.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (Sig_18_Blood)
|
5s |
2s |
1s |
1s |
14.4 MB |
1520% |
13.0 MB |
64.8 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL)
|
19s |
8s |
0s |
10s |
3.5 MB |
122% |
923.7 KB |
672.0 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (Sig_18_Blood)
|
18s |
8s |
0s |
9s |
3.5 MB |
122% |
923.8 KB |
672.1 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL;sentieon_haplotyper_rf)
|
3s |
1s |
- |
- |
3.2 MB |
80% |
127.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (Sig_18_Blood;sentieon_haplotyper_rf)
|
6s |
1s |
- |
- |
3.2 MB |
166% |
130.2 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)
|
12s |
3s |
0s |
8s |
22.4 MB |
4592% |
11.5 MB |
74.1 KB |
336.0 KB |
88.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (Sig_18_Blood)
|
13s |
3s |
0s |
9s |
19.8 MB |
5167% |
11.5 MB |
82.9 KB |
340.0 KB |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;tnseq)
|
33s |
3s |
26s |
4s |
5.4 GB |
591% |
170.9 MB |
3.3 MB |
0 bytes |
500.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;tnseq)
|
44s |
17s |
24s |
3s |
6.2 GB |
925% |
170.9 MB |
3.4 MB |
0 bytes |
540.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)
|
39s |
38s |
- |
- |
3.3 MB |
51% |
466.0 KB |
45.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;tnseq)
|
40s |
39s |
- |
- |
3.1 MB |
73% |
499.0 KB |
51.2 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL)
|
4s |
1s |
1s |
1s |
381.9 MB |
526% |
16.5 MB |
50.3 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood)
|
7s |
3s |
2s |
1s |
271.9 MB |
1037% |
16.5 MB |
57.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL)
|
11s |
9s |
0s |
1s |
13.8 MB |
847% |
11.2 MB |
50.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood)
|
11s |
9s |
0s |
1s |
18.9 MB |
777% |
11.2 MB |
57.8 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_BL)
|
43s |
4s |
28s |
11s |
4.3 GB |
260% |
1.1 GB |
69.7 MB |
0 bytes |
52.0 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (Sig_18_Blood)
|
45s |
4s |
30s |
11s |
3.6 GB |
236% |
1.3 GB |
69.8 MB |
0 bytes |
52.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_BL)
|
7s |
3s |
2s |
2s |
141.1 MB |
1029% |
75.3 MB |
69.5 KB |
0 bytes |
84.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (Sig_18_Blood)
|
8s |
3s |
3s |
2s |
147.1 MB |
1018% |
75.3 MB |
69.5 KB |
0 bytes |
84.0 KB |
1 |