|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal)
|
10s |
8s |
0s |
1s |
3.6 MB |
379% |
108.9 KB |
687 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL)
|
12s |
10s |
0s |
1s |
5.6 MB |
704% |
166.5 KB |
693 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal)
|
9s |
7s |
- |
- |
21.1 MB |
785% |
216.9 KB |
21.5 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
6s |
- |
- |
22.9 MB |
1511% |
201.7 KB |
21.3 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal)
|
51s |
29s |
18s |
3s |
3.9 GB |
1549% |
511.8 MB |
38.3 MB |
0 bytes |
38.3 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL)
|
39s |
27s |
7s |
4s |
3.8 GB |
724% |
356.9 MB |
15.9 MB |
0 bytes |
15.9 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (custom_Sig_18_tumor_normal)
|
10s |
4s |
2s |
4s |
56.1 MB |
103% |
52.1 MB |
3.4 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_catalin (HCC1395_tumor_vs_HCC1395_BL)
|
10s |
4s |
2s |
4s |
60.5 MB |
90% |
30.8 MB |
3.3 KB |
0 bytes |
24.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal)
|
14s |
4s |
4s |
6s |
186.1 MB |
100% |
81.8 MB |
5.9 KB |
0 bytes |
40.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL)
|
7s |
3s |
1s |
3s |
80.5 MB |
105% |
50.0 MB |
5.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (custom_Sig_18_tumor_normal)
|
8s |
4s |
- |
- |
11.7 MB |
106% |
25.0 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI_tso (HCC1395_tumor_vs_HCC1395_BL)
|
8s |
3s |
1s |
4s |
11.6 MB |
74% |
14.0 MB |
1.8 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal)
|
1m 9s |
52s |
15s |
1s |
892.2 MB |
180% |
89.3 MB |
34.7 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL)
|
1m 54s |
1m 17s |
33s |
3s |
1.0 GB |
111% |
89.3 MB |
34.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal)
|
44s |
40s |
3s |
0s |
232.0 MB |
447% |
41.8 MB |
4.9 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL)
|
1m 4s |
56s |
5s |
2s |
341.9 MB |
175% |
41.8 MB |
5.1 KB |
0 bytes |
20.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal)
|
2m 38s |
58s |
1m 36s |
3s |
2.9 GB |
214% |
695.3 MB |
853.9 MB |
0 bytes |
856.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL)
|
1m 49s |
50s |
53s |
5s |
2.8 GB |
205% |
693.8 MB |
848.9 MB |
0 bytes |
851.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (custom_Sig_18_tumor_normal)
|
1m 54s |
57s |
54s |
2s |
1.2 GB |
196% |
479.9 MB |
235.6 MB |
0 bytes |
238.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (HCC1395_tumor_vs_HCC1395_BL)
|
1m 28s |
51s |
35s |
1s |
982.1 MB |
263% |
480.0 MB |
235.6 MB |
0 bytes |
238.1 MB |
1 |