|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (custom_Sig_18_tumor_normal)
|
7m 0s |
1m 21s |
5m 16s |
22s |
3.6 GB |
173% |
30.7 GB |
27.7 GB |
0 bytes |
1.4 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (HCC1395_tumor_vs_HCC1395_BL)
|
9m 29s |
1m 24s |
7m 43s |
21s |
3.7 GB |
166% |
27.7 GB |
25.1 GB |
0 bytes |
1.4 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (custom_Sig_18_tumor_normal)
|
1m 2s |
3s |
50s |
9s |
307.1 MB |
244% |
9.4 GB |
3.0 GB |
909.9 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_MANTA:MANTA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL)
|
47s |
3s |
35s |
9s |
208.1 MB |
189% |
6.7 GB |
3.0 GB |
37.2 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (custom_Sig_18_tumor_normal)
|
18s |
13s |
3s |
2s |
253.4 MB |
323% |
95.8 MB |
721.2 KB |
0 bytes |
728.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_INDELS (HCC1395_tumor_vs_HCC1395_BL)
|
16s |
12s |
3s |
1s |
242.5 MB |
317% |
95.9 MB |
717.5 KB |
0 bytes |
724.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (custom_Sig_18_tumor_normal)
|
17s |
13s |
2s |
2s |
308.7 MB |
328% |
95.8 MB |
730.2 KB |
0 bytes |
736.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:MERGE_STRELKA_SNVS (HCC1395_tumor_vs_HCC1395_BL)
|
5s |
1s |
2s |
2s |
324.5 MB |
327% |
95.8 MB |
732.1 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_34799195-34799564.bed)
|
3m 3s |
3s |
2m 49s |
11s |
192.5 MB |
85% |
3.5 GB |
3.0 GB |
393.8 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_44102678-44103072.bed)
|
1m 2s |
3s |
49s |
10s |
123.3 MB |
53% |
3.2 GB |
3.0 GB |
41.2 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (custom_Sig_18_tumor_normal;chr21_5117003-5117331.bed)
|
1m 19s |
3s |
1m 4s |
12s |
288.6 MB |
70% |
3.4 GB |
3.0 GB |
330.9 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_34799195-34799564.bed)
|
1m 18s |
4s |
1m 4s |
10s |
167.0 MB |
66% |
3.3 GB |
3.0 GB |
254.3 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_44102678-44103072.bed)
|
45s |
1s |
35s |
9s |
107.5 MB |
43% |
3.2 GB |
3.0 GB |
56.3 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (HCC1395_tumor_vs_HCC1395_BL;chr21_5117003-5117331.bed)
|
46s |
2s |
35s |
9s |
262.6 MB |
54% |
3.2 GB |
3.0 GB |
168.3 MB |
3.0 GB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (custom_Sig_18_tumor_normal)
|
17s |
5s |
2s |
9s |
486.1 MB |
4528% |
31.3 MB |
568.3 KB |
0 bytes |
25.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNFILTER (HCC1395_tumor_vs_HCC1395_BL)
|
14s |
1s |
2s |
10s |
481.8 MB |
5375% |
31.2 MB |
517.9 KB |
0 bytes |
25.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (custom_Sig_18_tumor_normal)
|
1m 28s |
9s |
58s |
20s |
2.0 GB |
1105% |
2.4 GB |
2.2 MB |
0 bytes |
9.6 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_TNSEQ:SENTIEON_TNHAPLOTYPER2 (HCC1395_tumor_vs_HCC1395_BL)
|
1m 11s |
31s |
17s |
22s |
992.1 MB |
1024% |
1.5 GB |
992.4 KB |
0 bytes |
8.4 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (custom_Sig_18_tumor_normal)
|
4s |
3s |
- |
- |
3.3 MB |
7881% |
602.5 KB |
162.6 KB |
0 bytes |
168.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:CONCAT_WHATSHAP_TNSEQ_VCFS (HCC1395_tumor_vs_HCC1395_BL)
|
3s |
1s |
- |
- |
3.3 MB |
7735% |
537.2 KB |
139.4 KB |
0 bytes |
144.0 KB |
1 |