succeeded NFCORE_SAREK:SAREK:VCF_QC_BCFTOOLS_VCFTOOLS:VCFTOOLS_TSTV_QUAL (Sig_18_Blood;snv_indel) 5s 2s - - 13.7 MB 130% 167.9 KB 4.2 KB 0 bytes 12.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (custom_Sig_18_tumor_normal) 8s 2s 2s 3s 435.8 MB 980% 81.0 MB 1.4 MB 0 bytes 1.4 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:ANNOTATE_BED_INFO (HCC1395_tumor_vs_HCC1395_BL) 7s 3s 2s 1s 431.6 MB 1024% 80.9 MB 1.3 MB 0 bytes 1.3 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (custom_Sig_18_tumor_normal) 3s 1s - - 22.7 MB 8549% 396.5 KB 119.9 KB 0 bytes 124.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL) 4s 2s - - 21.5 MB 8318% 369.1 KB 104.7 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal) 3s 1s - - 3.3 MB 8310% 495.7 KB 125.2 KB 0 bytes 132.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL) 11s 1s - - 3.3 MB 7687% 448.3 KB 109.3 KB 0 bytes 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (custom_Sig_18_tumor_normal;snv_indel) 21s 1s 9s 11s 383.3 MB 132% 3.1 GB 5.4 MB 2.1 GB 468.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 24s 1s 9s 14s 252.1 MB 127% 3.1 GB 4.7 MB 1.7 GB 428.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (custom_Sig_18_tumor_normal) 4s 2s 0s 1s 5.1 MB 2481% 120.9 KB 665 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (HCC1395_tumor_vs_HCC1395_BL) 4s 2s 0s 1s 3.6 MB 2518% 120.5 KB 665 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (custom_Sig_18_tumor_normal) 3s 1s 0s 1s 17.3 MB 97% 4.4 MB 2.6 MB 0 bytes 2.6 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (HCC1395_tumor_vs_HCC1395_BL) 7s 5s 0s 1s 17.4 MB 94% 4.0 MB 2.2 MB 0 bytes 2.2 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (custom_Sig_18_tumor_normal) 3s 1s 0s 1s 17.6 MB 96% 3.9 MB 2.5 MB 0 bytes 2.5 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (HCC1395_tumor_vs_HCC1395_BL) 2s 1s 0s 0s 18.1 MB 88% 3.5 MB 2.2 MB 0 bytes 2.2 MB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (custom_Sig_18_tumor_normal) 22s 6s 7s 8s 60.3 MB 426% 3.0 GB 599.2 KB 0 bytes 228.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (HCC1395_tumor_vs_HCC1395_BL) 22s 6s 7s 8s 60.3 MB 430% 3.0 GB 564.1 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (custom_Sig_18_tumor_normal) 21s 5s 7s 8s 85.7 MB 481% 3.0 GB 2.3 MB 0 bytes 388.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (HCC1395_tumor_vs_HCC1395_BL) 22s 6s 7s 8s 85.9 MB 461% 3.0 GB 2.1 MB 0 bytes 364.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (custom_Sig_18_tumor_normal;snv_indel) 3s 1s - - 3.3 MB 95% 383.4 KB 6.5 KB 0 bytes 8.0 KB 1
332 items found |
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