|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (HCC1395_BL)
|
42s |
39s |
1s |
1s |
36.4 MB |
273% |
12.9 MB |
55.6 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SCORE_CHIP_VARIANTS (Sig_18_Blood)
|
59s |
56s |
1s |
1s |
40.9 MB |
144% |
12.9 MB |
64.8 KB |
0 bytes |
72.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (HCC1395_BL)
|
11s |
2s |
0s |
8s |
3.7 MB |
117% |
945.1 KB |
672.0 KB |
0 bytes |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:SENTIEON_GENOTYPE (Sig_18_Blood)
|
11s |
2s |
0s |
8s |
3.7 MB |
104% |
945.2 KB |
672.2 KB |
956.0 KB |
32.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (HCC1395_BL;sentieon_haplotyper_rf)
|
3s |
1s |
- |
- |
3.2 MB |
93% |
136.8 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TABIX_GERMLINE (Sig_18_Blood;sentieon_haplotyper_rf)
|
3s |
2s |
- |
- |
3.1 MB |
103% |
139.1 KB |
5.0 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (HCC1395_BL)
|
2m 4s |
44s |
1s |
1m 18s |
28.2 MB |
106% |
11.4 MB |
74.1 KB |
304.0 KB |
88.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:TRANSFER_CALLER_AD (Sig_18_Blood)
|
2m 4s |
44s |
1s |
1m 18s |
18.1 MB |
101% |
11.4 MB |
82.9 KB |
612.0 KB |
100.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (HCC1395_BL;tnseq)
|
42s |
12s |
26s |
4s |
4.7 GB |
318% |
170.9 MB |
3.3 MB |
0 bytes |
472.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:SNPEFF_SNPEFF (Sig_18_Blood;tnseq)
|
42s |
12s |
26s |
4s |
5.0 GB |
314% |
170.9 MB |
3.4 MB |
0 bytes |
536.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (HCC1395_BL;tnseq)
|
4s |
3s |
- |
- |
3.3 MB |
81% |
469.7 KB |
45.5 KB |
0 bytes |
52.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (Sig_18_Blood;tnseq)
|
5s |
4s |
- |
- |
3.2 MB |
108% |
502.6 KB |
51.2 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (HCC1395_BL)
|
6s |
2s |
1s |
2s |
321.0 MB |
1100% |
16.5 MB |
50.3 KB |
0 bytes |
60.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_CHIP_PON (Sig_18_Blood)
|
6s |
2s |
1s |
2s |
317.3 MB |
1070% |
16.5 MB |
57.5 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (HCC1395_BL)
|
12s |
10s |
0s |
1s |
16.3 MB |
4225% |
11.2 MB |
50.4 KB |
0 bytes |
56.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:VCF_MERGE_CHARACTERISTICS:MERGE_GERMLINE (Sig_18_Blood)
|
12s |
10s |
0s |
1s |
16.9 MB |
4200% |
11.2 MB |
57.8 KB |
0 bytes |
64.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (HCC1395_BL)
|
32s |
27s |
4s |
1s |
290.1 MB |
288% |
95.9 MB |
734.7 KB |
0 bytes |
740.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:MERGE_SENTIEON_HAPLOTYPER_VCFS (Sig_18_Blood)
|
33s |
27s |
4s |
2s |
208.9 MB |
303% |
95.9 MB |
737.2 KB |
0 bytes |
744.0 KB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL;chr21_44120631-44120778.bed)
|
20s |
2s |
1s |
16s |
229.1 MB |
382% |
141.9 MB |
99.6 KB |
0 bytes |
2.1 MB |
1 |
|
succeeded
|
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER:SENTIEON_HAPLOTYPER (HCC1395_BL;chr21_5117103-5117231.bed)
|
29s |
15s |
3s |
10s |
416.5 MB |
784% |
385.1 MB |
173.4 KB |
0 bytes |
6.2 MB |
1 |