succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (HCC1395_BL;HCC1395_BL) 22s 2s 8s 12s 53.3 MB 101% 3.2 GB 268.0 KB 0 bytes 272.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:SAMTOOLS_MPILEUP (Sig_18_Blood;Sig_18_Blood) 22s 3s 9s 10s 53.8 MB 101% 3.3 GB 404.7 KB 0 bytes 412.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (HCC1395_BL;sentieon_haplotyper) 3s 1s - - 3.3 MB 123% 126.4 KB 5.2 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:VCF_ANNOTATE_INDEL_ENTROPY:TABIX_TABIX (Sig_18_Blood;sentieon_haplotyper) 3s 2s - - 3.3 MB 139% 128.7 KB 5.2 KB 0 bytes 8.0 KB 1
failed NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (HCC1395_BL) 1m 59s 1m 59s - - - - - - - - 3
failed NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:GERMLINE_CNV (Sig_18_Blood) 2m 59s 2m 59s - - - - - - - - 3
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (HCC1395_BL) 5s 3s - - 3.3 MB 100% 2.1 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_NORMAL (Sig_18_Blood) 8s 3s - - 3.2 MB 74% 2.2 MB 108.4 KB 0 bytes 112.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (HCC1395_tumor) 5s 1s - - 3.3 MB 116% 2.3 MB 108.4 KB 0 bytes 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_ESTIMATE_SEX_TUMOR (Sig_18_tissue) 7s 1s - - 3.2 MB 108% 2.6 MB 108.5 KB 0 bytes 116.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (custom_Sig_18_tumor_normal) 1m 39s 17s 1m 12s 10s 2.1 GB 158% 9.5 GB 6.0 MB 0 bytes 5.7 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_BATCH (HCC1395_tumor_vs_HCC1395_BL) 1m 5s 16s 40s 9s 2.1 GB 203% 6.5 GB 5.6 MB 0 bytes 5.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (custom_Sig_18_tumor_normal) 18s 15s 2s 1s 162.5 MB 146% 75.3 MB 68.3 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_CALL (HCC1395_tumor_vs_HCC1395_BL) 17s 14s 2s 1s 159.2 MB 175% 75.3 MB 68.3 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (custom_Sig_18_tumor_normal) 25s 19s 4s 2s 133.5 MB 245% 75.3 MB 69.3 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_EXPORT (HCC1395_tumor_vs_HCC1395_BL) 24s 18s 4s 2s 131.1 MB 245% 75.3 MB 69.7 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (custom_Sig_18_tumor_normal) 26s 21s 5s 0s 163.5 MB 243% 75.4 MB 68.0 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_CNVKIT:CNVKIT_GENEMETRICS (HCC1395_tumor_vs_HCC1395_BL) 24s 18s 4s 2s 167.4 MB 438% 75.4 MB 68.0 KB 0 bytes 84.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (custom_Sig_18_tumor_normal) 5m 47s 1m 8s 4m 14s 24s 3.6 GB 230% 30.7 GB 27.7 GB 0 bytes 1.4 GB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:BAM_VARIANT_CALLING_SOMATIC_FACETS:CNV_FACETS (HCC1395_tumor_vs_HCC1395_BL) 5m 50s 1m 7s 4m 17s 25s 3.6 GB 185% 27.7 GB 25.1 GB 0 bytes 1.4 GB 1
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