succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:BCFTOOLS_CONCAT (HCC1395_tumor_vs_HCC1395_BL) 4s 2s 1s 1s 24.6 MB 7605% 236.3 KB 40.2 KB 0 bytes 48.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (custom_Sig_18_tumor_normal) 4s 2s - - 3.3 MB 2516% 261.0 KB 48.5 KB 0 bytes 60.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:CONCAT_WHATSHAP_VCFS (HCC1395_tumor_vs_HCC1395_BL) 7s 5s - - 3.3 MB 1071% 241.0 KB 41.9 KB 0 bytes 52.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (custom_Sig_18_tumor_normal;snv_indel) 54s 3s 10s 41s 412.6 MB 116% 3.1 GB 1.9 MB 1.8 GB 276.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:ENSEMBLVEP_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 1m 30s 21s 10s 59s 352.9 MB 110% 3.1 GB 1.5 MB 1.0 GB 256.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (custom_Sig_18_tumor_normal) 4s 3s 0s 0s 3.6 MB 1112% 116.3 KB 660 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:EXTRACT_CHROMOSOMES (HCC1395_tumor_vs_HCC1395_BL) 4s 2s 0s 1s 5.5 MB 2560% 115.6 KB 661 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (custom_Sig_18_tumor_normal) 6s 3s 0s 2s 12.6 MB 103% 8.6 MB 830.8 KB 0 bytes 840.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:HARD_FILTER_VCF (HCC1395_tumor_vs_HCC1395_BL) 5s 2s 0s 2s 12.4 MB 101% 8.4 MB 650.2 KB 0 bytes 660.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (custom_Sig_18_tumor_normal) 6s 4s 0s 1s 12.6 MB 100% 2.0 MB 816.2 KB 0 bytes 828.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:LABEL_HOTSPOTS (HCC1395_tumor_vs_HCC1395_BL) 9s 7s 0s 1s 12.6 MB 100% 1.8 MB 637.5 KB 0 bytes 648.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (custom_Sig_18_tumor_normal) 20s 3s 7s 9s 60.2 MB 379% 3.0 GB 596.5 KB 0 bytes 228.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (HCC1395_tumor_vs_HCC1395_BL) 19s 2s 7s 9s 60.0 MB 404% 3.0 GB 562.7 KB 0 bytes 220.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (custom_Sig_18_tumor_normal) 20s 4s 7s 8s 85.7 MB 441% 3.0 GB 1.2 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:PREP_TNSEQ_SNV (HCC1395_tumor_vs_HCC1395_BL) 20s 4s 7s 8s 85.8 MB 365% 3.0 GB 1.1 MB 0 bytes 244.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (custom_Sig_18_tumor_normal;snv_indel) 4s 3s - - 3.2 MB 122% 182.2 KB 4.9 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TABIX_VEP (HCC1395_tumor_vs_HCC1395_BL;snv_indel) 4s 2s - - 3.3 MB 116% 163.3 KB 4.4 KB 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (custom_Sig_18_tumor_normal) 5s 3s 0s 1s 12.7 MB 103% 2.1 MB 831.4 KB 0 bytes 852.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:TMB_SNV_INDEL (HCC1395_tumor_vs_HCC1395_BL) 5s 2s 0s 2s 12.6 MB 106% 1.9 MB 650.7 KB 0 bytes 672.0 KB 1
succeeded NFCORE_SAREK:SAREK:VCF_SOMATIC_SNV_INDEL:WHATSHAP (custom_Sig_18_tumor_normal:chr21) 2m 54s 5s 2m 36s 13s 299.2 MB 99% 776.1 MB 404.5 KB 0 bytes 412.0 KB 1
328 items found |
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