succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (custom_Sig_18_tumor_normal) 5s 3s 0s 1s 5.6 MB 1408% 110.1 KB 692 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:EXTRACT_CHROMOSOMES_TNSEQ (HCC1395_tumor_vs_HCC1395_BL) 4s 3s 0s 0s 3.6 MB 533% 108.7 KB 688 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (custom_Sig_18_tumor_normal) 5s 3s - - 18.5 MB 1990% 210.4 KB 21.4 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:FILTER_TNSEQ_VCF_FOR_SOMATIC (HCC1395_tumor_vs_HCC1395_BL) 5s 3s - - 20.1 MB 4765% 193.7 KB 21.3 KB 0 bytes 32.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (custom_Sig_18_tumor_normal) 1m 12s 48s 19s 4s 3.9 GB 2522% 392.4 MB 19.7 MB 0 bytes 19.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MIMSI_ANALYZE (HCC1395_tumor_vs_HCC1395_BL) 1m 20s 50s 26s 3s 3.8 GB 1488% 299.3 MB 8.8 MB 10.7 MB 8.8 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (custom_Sig_18_tumor_normal) 7s 3s - - 11.6 MB 114% 5.9 MB 1.8 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:MSISENSOR2_MSI (HCC1395_tumor_vs_HCC1395_BL) 11s 4s - - 9.8 MB 109% 4.7 MB 1.8 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (custom_Sig_18_tumor_normal) 23s 2s 18s 2s 1.1 GB 123% 89.3 MB 34.7 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:N7_COSMIC_SIGS (HCC1395_tumor_vs_HCC1395_BL) 26s 4s 20s 1s 957.7 MB 123% 89.3 MB 34.6 KB 0 bytes 64.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (custom_Sig_18_tumor_normal) 51s 46s 3s 1s 331.3 MB 166% 41.8 MB 4.9 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:SCARHRD (HCC1395_tumor_vs_HCC1395_BL) 59s 54s 3s 1s 327.6 MB 197% 41.8 MB 5.0 KB 0 bytes 20.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (custom_Sig_18_tumor_normal) 1m 35s 3s 1m 27s 4s 2.8 GB 173% 692.9 MB 853.9 MB 0 bytes 856.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_CALLING (HCC1395_tumor_vs_HCC1395_BL) 2m 15s 55s 1m 15s 4s 2.8 GB 145% 693.2 MB 848.9 MB 0 bytes 851.4 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (custom_Sig_18_tumor_normal) 1m 56s 1m 1s 52s 2s 1.1 GB 198% 479.6 MB 235.6 MB 0 bytes 238.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:TIH_HRD_PLTF (HCC1395_tumor_vs_HCC1395_BL) 1m 42s 54s 45s 2s 1.1 GB 142% 479.3 MB 235.6 MB 0 bytes 238.1 MB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_TNSEQ (custom_Sig_18_tumor_normal:chr21) 1m 43s 9s 1m 24s 10s 314.8 MB 100% 776.2 MB 492.9 KB 16.0 KB 500.0 KB 1
succeeded NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:WHATSHAP_TNSEQ (HCC1395_tumor_vs_HCC1395_BL:chr21) 51s 4s 38s 9s 161.1 MB 100% 415.0 MB 413.4 KB 0 bytes 420.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (HCC1395_tumor_vs_HCC1395_BL) 13s 2s 8s 2s 85.8 MB 194% 27.0 MB 713 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_SAREK:SAREK:CRAM_SAMPLE_INTEGRITY:BAM_CONTAMINATION_ANALYSIS:CONPAIR_CONTAMINATION (Sig_18_tissue_vs_Sig_18_Blood) 27s 3s 21s 2s 87.2 MB 161% 29.5 MB 715 bytes 0 bytes 8.0 KB 1
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