.command.log - Workdir - NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (HCC1395_BL;tnseq)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/bbfdd7d656d74a0d02332ca4ac8d62/.command.log
Size: 665 bytes
Task: NFCORE_SAREK:SAREK:BAM_CHIP_DETECTION:BCFTOOLS_STRIP_FILTER (HCC1395_BL;tnseq)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/2c4981fd9c3661216cbddf4c4998ec/HCC1395_BL.survivors.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/2c4981fd9c3661216cbddf4c4998ec/HCC1395_BL.survivors.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/bbfdd7d656d74a0d02332ca4ac8d62/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/bbfdd7d656d74a0d02332ca4ac8d62/.command.run
==> STAGING COMPLETE (4 inputs)

ls: *.vcf: No such file or directory
ls: *.bcf: No such file or directory
ls: *.bcf.gz: No such file or directory
ls: *.csi: No such file or directory