File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/241fa4b8c61c88f026ec26a7d9dfd6/.command.log
Size
945 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_GERMLINE_ALL:BAM_VARIANT_CALLING_SENTIEON_HAPLOTYPER_RF:MERGE_FORCECALLED (HCC1395_BL)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/241fa4b8c61c88f026ec26a7d9dfd6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/fe0fce9cef065efa8655e33448db91/HCC1395_BL.forcecall.unfiltered.vcf.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/241fa4b8c61c88f026ec26a7d9dfd6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/fe0fce9cef065efa8655e33448db91/HCC1395_BL.forcecall.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/6ff9f029e5a88b3e4f2923aeddbe25/HCC1395_BL.haplotyper.unfiltered.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/6ff9f029e5a88b3e4f2923aeddbe25/HCC1395_BL.haplotyper.unfiltered.vcf.gz.tbi
==> STAGING COMPLETE (6 inputs)

Writing to /tmp/bcftools.Ibk4Vp
Checking the headers and starting positions of 2 files
Merging 1 temporary files
Done
Cleaning