File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/13d509bd8d8c7a57556ba7a3975d5b/.command.log
Size
669 bytes
Task
NFCORE_SAREK:SAREK:BAM_VARIANT_CALLING_SOMATIC_ALL:VCF_SOMATIC_SNV_INDEL:PREP_STRELKA_INDEL (HCC1395_tumor_vs_HCC1395_BL)
Attempt

Content

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  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/13d509bd8d8c7a57556ba7a3975d5b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/13d509bd8d8c7a57556ba7a3975d5b/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/e7f15e85d510cb9aac84b75300fc1d/HCC1395_tumor_vs_HCC1395_BL.strelka.somatic_indels.vcf.gz
==> STAGING COMPLETE (4 inputs)

Lines   total/split/joined/realigned/mismatch_removed/dup_removed/skipped:	42/0/0/0/0/0/0