.command.log - Workdir - NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (custom_Sig_18_tumor_normal;manta)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/eef702a2e3124d08a91c15c49c6277/.command.log
Size: 462 bytes
Task: NFCORE_SAREK:SAREK:VCF_ANNOTATE_ALL:VCF_ANNOTATE_SNPEFF:TABIX_BGZIPTABIX (custom_Sig_18_tumor_normal;manta)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/eef702a2e3124d08a91c15c49c6277/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/96/abe967f9fe2f883eed70f7b46976d4/custom_Sig_18_tumor_normal.manta.diploid_sv_custom.ann_snpEff.ann.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/eef702a2e3124d08a91c15c49c6277/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory